RNA–Protein interactions for RNA: ENST00000329516.7

RGPD6-201, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD6, Length 7,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-201ENST00000329516 ATP4AP20648 1035 aa2.94□□□□□ -1.94
RGPD6-201ENST00000329516 RDXP35241 583 aaKnown RBP2.94□□□□□ -1.94
RGPD6-201ENST00000329516 MRE11P49959 708 aa2.94□□□□□ -1.94
RGPD6-201ENST00000329516 CDR1P51861 262 aa2.94□□□□□ -1.94
RGPD6-201ENST00000329516 NR5A1Q13285 461 aa2.94□□□□□ -1.94
RGPD6-201ENST00000329516 COBLL1Q53SF7 1204 aa2.94□□□□□ -1.94
RGPD6-201ENST00000329516 BZW1Q7L1Q6 419 aaKnown RBP2.94□□□□□ -1.94
RGPD6-201ENST00000329516 TICAM1Q8IUC6 712 aa2.94□□□□□ -1.94
RGPD6-201ENST00000329516 ELOA2Q8IYF1 753 aaPredicted RBP2.94□□□□□ -1.94
RGPD6-201ENST00000329516 ARHGEF10LQ9HCE6 1279 aa2.94□□□□□ -1.94
RGPD6-201ENST00000329516 POTEB2H3BUK9 544 aa2.94□□□□□ -1.94
RGPD6-201ENST00000329516 C1QCP02747 245 aa2.94□□□□□ -1.94
RGPD6-201ENST00000329516 FAM153BP0C7A2 387 aa2.94□□□□□ -1.94
RGPD6-201ENST00000329516 ALAS1P13196 640 aa2.94□□□□□ -1.94
RGPD6-201ENST00000329516 AARSP49588 968 aaKnown RBP eCLIP2.94□□□□□ -1.94
RGPD6-201ENST00000329516 AKAP17AQ02040 695 aaKnown RBP2.94□□□□□ -1.94
RGPD6-201ENST00000329516 CCDC173Q0VFZ6 552 aa2.94□□□□□ -1.94
RGPD6-201ENST00000329516 FAM153CQ494X1 144 aa2.94□□□□□ -1.94
RGPD6-201ENST00000329516 MAP9Q49MG5 647 aa2.94□□□□□ -1.94
RGPD6-201ENST00000329516 IQCCQ4KMZ1 466 aa2.94□□□□□ -1.94
RGPD6-201ENST00000329516 ZC3H18Q86VM9 953 aaKnown RBP2.94□□□□□ -1.94
RGPD6-201ENST00000329516 SEPT12Q8IYM1 358 aa2.94□□□□□ -1.94
RGPD6-201ENST00000329516 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.94□□□□□ -1.94
RGPD6-201ENST00000329516 FBXO25Q8TCJ0 367 aa2.94□□□□□ -1.94
RGPD6-201ENST00000329516 ZNF483Q8TF39 744 aaPredicted RBP2.94□□□□□ -1.94
RGPD6-201ENST00000329516 EPYCQ99645 322 aa2.94□□□□□ -1.94
RGPD6-201ENST00000329516 RBM28Q9NW13 759 aaKnown RBP2.94□□□□□ -1.94
RGPD6-201ENST00000329516 FAM153AQ9UHL3 310 aa2.94□□□□□ -1.94
RGPD6-201ENST00000329516 TCRBV7S2A1N4TA0A589 114 aa2.94□□□□□ -1.94
RGPD6-201ENST00000329516 KIF4AO95239 1232 aa2.94□□□□□ -1.94
RGPD6-201ENST00000329516 PSMA3P25788 255 aa2.94□□□□□ -1.94
RGPD6-201ENST00000329516 GUCY2DQ02846 1103 aa2.94□□□□□ -1.94
RGPD6-201ENST00000329516 FOXD4Q12950 439 aaPredicted RBP2.94□□□□□ -1.94
RGPD6-201ENST00000329516 SLC9C2Q5TAH2 1124 aa2.94□□□□□ -1.94
RGPD6-201ENST00000329516 SUSD4Q5VX71 490 aa2.94□□□□□ -1.94
RGPD6-201ENST00000329516 ZNF772Q68DY9 489 aaPredicted RBP2.94□□□□□ -1.94
RGPD6-201ENST00000329516 CD300LGQ6UXG3 332 aa2.94□□□□□ -1.94
RGPD6-201ENST00000329516 VPS37DQ86XT2 251 aa2.94□□□□□ -1.94
RGPD6-201ENST00000329516 BPIFA3Q9BQP9 254 aa2.94□□□□□ -1.94
RGPD6-201ENST00000329516 SEMA6BQ9H3T3 888 aa2.94□□□□□ -1.94
RGPD6-201ENST00000329516 GIMAP4Q9NUV9 329 aa2.94□□□□□ -1.94
RGPD6-201ENST00000329516 PCDHGA4Q9Y5G9 962 aa2.94□□□□□ -1.94
RGPD6-201ENST00000329516 PRRC2BQ5JSZ5 2229 aaKnown RBP2.93□□□□□ -1.94
RGPD6-201ENST00000329516 MYO1BO43795 1136 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 CD68P34810 354 aaPredicted RBP2.93□□□□□ -1.94
RGPD6-201ENST00000329516 TNNT3P45378 269 aaPredicted RBP2.93□□□□□ -1.94
RGPD6-201ENST00000329516 TAF7Q15545 349 aaPredicted RBP2.93□□□□□ -1.94
RGPD6-201ENST00000329516 ARMC3Q5W041 872 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 LAIR1Q6GTX8 287 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 ACRBPQ8NEB7 543 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 GCC1Q96CN9 775 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 CEP131Q9UPN4 1083 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 A0A0G2JS52 829 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 YDJCA8MPS7 323 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 PRPF40AO75400 957 aaKnown RBP2.93□□□□□ -1.94
RGPD6-201ENST00000329516 SKILP12757 684 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 CRYBA2P53672 197 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 SNRPNP63162 240 aaKnown RBP2.93□□□□□ -1.94
RGPD6-201ENST00000329516 SAFBQ15424 915 aaKnown RBP eCLIP2.93□□□□□ -1.94
RGPD6-201ENST00000329516 NBPF20Q3BBV1 942 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 GALNTL6Q49A17 601 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 WLSQ5T9L3 541 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 FBXO33Q7Z6M2 555 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 FBXO27Q8NI29 283 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 COG3Q96JB2 828 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 KATNBL1Q9H079 304 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 ZNF233A6NK53 670 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 PHF20L1A8MW92 1017 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 MINDY4BA8MYZ0 360 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 GOLIM4O00461 696 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 ZNF202O95125 648 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 MX1P20591 662 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 SLC10A2Q12908 348 aaPredicted RBP2.93□□□□□ -1.94
RGPD6-201ENST00000329516 GPNMBQ14956 572 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 CCDC183Q5T5S1 534 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 RPUSD2Q8IZ73 545 aaKnown RBP2.93□□□□□ -1.94
RGPD6-201ENST00000329516 IGSF22Q8N9C0 903 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 RDH13Q8NBN7 331 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 FAM110BQ8TC76 370 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 ERLEC1Q96DZ1 483 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.93□□□□□ -1.94
RGPD6-201ENST00000329516 UMODL1Q5DID0 1318 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 E7EWF7 191 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 AP3B1O00203 1094 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 ATF7P17544 494 aaPredicted RBP2.93□□□□□ -1.94
RGPD6-201ENST00000329516 IL6STP40189 918 aaPredicted RBP2.93□□□□□ -1.94
RGPD6-201ENST00000329516 PEX5P50542 639 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 QPCTQ16769 361 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 ZC2HC1CQ53FD0 456 aaPredicted RBP2.93□□□□□ -1.94
RGPD6-201ENST00000329516 EXOC3L1Q86VI1 746 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.93□□□□□ -1.94
RGPD6-201ENST00000329516 CCDC110Q8TBZ0 833 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 CERKQ8TCT0 537 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 SH3RF3Q8TEJ3 882 aaPredicted RBP2.93□□□□□ -1.94
RGPD6-201ENST00000329516 METTL22Q9BUU2 404 aaPredicted RBP2.93□□□□□ -1.94
RGPD6-201ENST00000329516 TENM3Q9P273 2699 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 GAKO14976 1311 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 LOC102724159A0A0B4J2E5 919 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 CHURC1-FNTBB4DL54 471 aa2.93□□□□□ -1.94
RGPD6-201ENST00000329516 PROS1P07225 676 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms