RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 CCDC122Q5T0U0 273 aa12.98□□□□□ -0.33
SHMT2-201ENST00000328923 SLC9C2Q5TAH2 1124 aa12.98□□□□□ -0.33
SHMT2-201ENST00000328923 CEP128Q6ZU80 1094 aa12.98□□□□□ -0.33
SHMT2-201ENST00000328923 SPATA31D4Q6ZUB0 917 aa12.98□□□□□ -0.33
SHMT2-201ENST00000328923 NCCRP1Q6ZVX7 275 aaPredicted RBP12.98□□□□□ -0.33
SHMT2-201ENST00000328923 LRP10Q7Z4F1 713 aa12.98□□□□□ -0.33
SHMT2-201ENST00000328923 APBB1IPQ7Z5R6 666 aaPredicted RBP12.98□□□□□ -0.33
SHMT2-201ENST00000328923 UCMAQ8WVF2 138 aa12.98□□□□□ -0.33
SHMT2-201ENST00000328923 CHP1Q99653 195 aa12.98□□□□□ -0.33
SHMT2-201ENST00000328923 OXCT2Q9BYC2 517 aaPredicted RBP12.98□□□□□ -0.33
SHMT2-201ENST00000328923 ABHD10Q9NUJ1 306 aa12.98□□□□□ -0.33
SHMT2-201ENST00000328923 MAN1B1Q9UKM7 699 aa12.98□□□□□ -0.33
SHMT2-201ENST00000328923 MAST3O60307 1309 aa12.98□□□□□ -0.33
SHMT2-201ENST00000328923 KLF18A0A0U1RQI7 1052 aa12.98□□□□□ -0.33
SHMT2-201ENST00000328923 ESYT3A0FGR9 886 aa12.98□□□□□ -0.33
SHMT2-201ENST00000328923 ERVV-2B6SEH9 535 aa12.98□□□□□ -0.33
SHMT2-201ENST00000328923 IFIT3O14879 490 aaKnown RBP12.98□□□□□ -0.33
SHMT2-201ENST00000328923 SARSP49591 514 aaKnown RBP12.98□□□□□ -0.33
SHMT2-201ENST00000328923 MORC3Q14149 939 aa12.98□□□□□ -0.33
SHMT2-201ENST00000328923 SEPT2Q15019 361 aa12.98□□□□□ -0.33
SHMT2-201ENST00000328923 COPS6Q7L5N1 327 aa12.98□□□□□ -0.33
SHMT2-201ENST00000328923 RIC3Q7Z5B4 369 aa12.98□□□□□ -0.33
SHMT2-201ENST00000328923 VPS37DQ86XT2 251 aa12.98□□□□□ -0.33
SHMT2-201ENST00000328923 XAGE3Q8WTP9 111 aa12.98□□□□□ -0.33
SHMT2-201ENST00000328923 ANKRD27Q96NW4 1050 aa12.98□□□□□ -0.33
SHMT2-201ENST00000328923 GPR108Q9NPR9 543 aa12.98□□□□□ -0.33
SHMT2-201ENST00000328923 PAIP2BQ9ULR5 123 aaKnown RBP12.98□□□□□ -0.33
SHMT2-201ENST00000328923 PLAAQ9Y263 795 aa12.98□□□□□ -0.33
SHMT2-201ENST00000328923 UBR2Q8IWV8 1755 aa12.97□□□□□ -0.33
SHMT2-201ENST00000328923 ITIH6Q6UXX5 1313 aa12.97□□□□□ -0.33
SHMT2-201ENST00000328923 ORC4O43929 436 aa12.97□□□□□ -0.33
SHMT2-201ENST00000328923 USO1O60763 962 aaKnown RBP12.97□□□□□ -0.33
SHMT2-201ENST00000328923 IDEP14735 1019 aa12.97□□□□□ -0.33
SHMT2-201ENST00000328923 EPHA10Q5JZY3 1008 aa12.97□□□□□ -0.33
SHMT2-201ENST00000328923 TCERG1LQ5VWI1 586 aa12.97□□□□□ -0.33
SHMT2-201ENST00000328923 PALB2Q86YC2 1186 aa12.97□□□□□ -0.33
SHMT2-201ENST00000328923 CREG2Q8IUH2 290 aa12.97□□□□□ -0.33
SHMT2-201ENST00000328923 SLC15A3Q8IY34 581 aa12.97□□□□□ -0.33
SHMT2-201ENST00000328923 MB21D2Q8IYB1 491 aaPredicted RBP12.97□□□□□ -0.33
SHMT2-201ENST00000328923 ATP11CQ8NB49 1132 aa12.97□□□□□ -0.33
SHMT2-201ENST00000328923 SPATA4Q8NEY3 305 aa12.97□□□□□ -0.33
SHMT2-201ENST00000328923 RUBCNQ92622 972 aa12.97□□□□□ -0.33
SHMT2-201ENST00000328923 ABCF3Q9NUQ8 709 aa12.97□□□□□ -0.33
SHMT2-201ENST00000328923 AFDNP55196 1824 aaKnown RBP12.97□□□□□ -0.33
SHMT2-201ENST00000328923 ZSCAN5CA6NGD5 496 aaPredicted RBP12.97□□□□□ -0.33
SHMT2-201ENST00000328923 SEMA3EO15041 775 aa12.97□□□□□ -0.33
SHMT2-201ENST00000328923 CEP104O60308 925 aa12.97□□□□□ -0.33
SHMT2-201ENST00000328923 NDUFA10O95299 355 aa12.97□□□□□ -0.33
SHMT2-201ENST00000328923 GNAZP19086 355 aa12.97□□□□□ -0.33
SHMT2-201ENST00000328923 PLCD1P51178 756 aa12.97□□□□□ -0.33
SHMT2-201ENST00000328923 VAV2P52735 878 aa12.97□□□□□ -0.33
SHMT2-201ENST00000328923 POSTNQ15063 836 aa12.97□□□□□ -0.33
SHMT2-201ENST00000328923 PKN1Q16512 942 aa12.97□□□□□ -0.33
SHMT2-201ENST00000328923 GBP7Q8N8V2 638 aaPredicted RBP12.97□□□□□ -0.33
SHMT2-201ENST00000328923 OR2W6PQ8NHA6 318 aa12.97□□□□□ -0.33
SHMT2-201ENST00000328923 SMCR8Q8TEV9 937 aaPredicted RBP12.97□□□□□ -0.33
SHMT2-201ENST00000328923 WHAMMQ8TF30 809 aa12.97□□□□□ -0.33
SHMT2-201ENST00000328923 IFT81Q8WYA0 676 aa12.97□□□□□ -0.33
SHMT2-201ENST00000328923 VCXQ9H320 206 aa12.97□□□□□ -0.33
SHMT2-201ENST00000328923 HAUS4Q9H6D7 363 aa12.97□□□□□ -0.33
SHMT2-201ENST00000328923 UTP6Q9NYH9 597 aaKnown RBP12.97□□□□□ -0.33
SHMT2-201ENST00000328923 EHD2Q9NZN4 543 aa12.97□□□□□ -0.33
SHMT2-201ENST00000328923 GGT7Q9UJ14 662 aa12.97□□□□□ -0.33
SHMT2-201ENST00000328923 EPN1Q9Y6I3 576 aaPredicted RBP12.97□□□□□ -0.33
SHMT2-201ENST00000328923 NDUFB9Q9Y6M9 179 aa12.97□□□□□ -0.33
SHMT2-201ENST00000328923 MYH13Q9UKX3 1938 aa12.97□□□□□ -0.33
SHMT2-201ENST00000328923 WNK3Q9BYP7 1800 aa12.96□□□□□ -0.33
SHMT2-201ENST00000328923 RNF113AO15541 343 aaKnown RBP12.96□□□□□ -0.33
SHMT2-201ENST00000328923 RARAP10276 462 aa12.96□□□□□ -0.33
SHMT2-201ENST00000328923 PIP4K2AP48426 406 aaPredicted RBP12.96□□□□□ -0.33
SHMT2-201ENST00000328923 HERVK_113P62684 666 aa12.96□□□□□ -0.33
SHMT2-201ENST00000328923 TSNAXIP1Q2TAA8 658 aa12.96□□□□□ -0.33
SHMT2-201ENST00000328923 C16orf87Q6PH81 154 aa12.96□□□□□ -0.33
SHMT2-201ENST00000328923 MIGA2Q7L4E1 593 aa12.96□□□□□ -0.33
SHMT2-201ENST00000328923 C1orf131Q8NDD1 294 aaKnown RBP12.96□□□□□ -0.33
SHMT2-201ENST00000328923 SMC1BQ8NDV3 1235 aa12.96□□□□□ -0.33
SHMT2-201ENST00000328923 SLC17A8Q8NDX2 589 aa12.96□□□□□ -0.33
SHMT2-201ENST00000328923 DDX27Q96GQ7 796 aaKnown RBP12.96□□□□□ -0.33
SHMT2-201ENST00000328923 CTAGE1Q96RT6 745 aa12.96□□□□□ -0.33
SHMT2-201ENST00000328923 METTL22Q9BUU2 404 aaPredicted RBP12.96□□□□□ -0.33
SHMT2-201ENST00000328923 ECT2Q9H8V3 914 aa12.96□□□□□ -0.33
SHMT2-201ENST00000328923 PCDH18Q9HCL0 1135 aa12.96□□□□□ -0.33
SHMT2-201ENST00000328923 SWAP70Q9UH65 585 aa12.96□□□□□ -0.33
SHMT2-201ENST00000328923 PAPPAQ13219 1627 aa12.96□□□□□ -0.33
SHMT2-201ENST00000328923 PRC1O43663 620 aa12.96□□□□□ -0.34
SHMT2-201ENST00000328923 UBOX5O94941 541 aa12.96□□□□□ -0.34
SHMT2-201ENST00000328923 GNA14O95837 355 aa12.96□□□□□ -0.34
SHMT2-201ENST00000328923 MSH2P43246 934 aa12.96□□□□□ -0.34
SHMT2-201ENST00000328923 SERPINB4P48594 390 aa12.96□□□□□ -0.34
SHMT2-201ENST00000328923 ATP11AP98196 1134 aa12.96□□□□□ -0.34
SHMT2-201ENST00000328923 MCL1Q07820 350 aa12.96□□□□□ -0.34
SHMT2-201ENST00000328923 SLC4A8Q2Y0W8 1093 aa12.96□□□□□ -0.34
SHMT2-201ENST00000328923 ODF2Q5BJF6 829 aa12.96□□□□□ -0.34
SHMT2-201ENST00000328923 TTC39AQ5SRH9 613 aa12.96□□□□□ -0.34
SHMT2-201ENST00000328923 KANK3Q6NY19 840 aa12.96□□□□□ -0.34
SHMT2-201ENST00000328923 RUFY4Q6ZNE9 571 aa12.96□□□□□ -0.34
SHMT2-201ENST00000328923 CHST3Q7LGC8 479 aa12.96□□□□□ -0.34
SHMT2-201ENST00000328923 TRPM8Q7Z2W7 1104 aa12.96□□□□□ -0.34
SHMT2-201ENST00000328923 ANKS4BQ8N8V4 417 aa12.96□□□□□ -0.34
SHMT2-201ENST00000328923 KRI1Q8N9T8 703 aaKnown RBP12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms