RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 MYL7Q01449 175 aa9.78□□□□□ -0.84
CD28-201ENST00000324106 GOLGA8FQ08AF8 430 aa9.78□□□□□ -0.84
CD28-201ENST00000324106 GOLGA8DPQ0D2H9 430 aa9.78□□□□□ -0.84
CD28-201ENST00000324106 MORC3Q14149 939 aa9.78□□□□□ -0.84
CD28-201ENST00000324106 SF3B3Q15393 1217 aaKnown RBP9.78□□□□□ -0.84
CD28-201ENST00000324106 FAM186BQ8IYM0 893 aa9.78□□□□□ -0.84
CD28-201ENST00000324106 NCAPGQ9BPX3 1015 aa9.78□□□□□ -0.84
CD28-201ENST00000324106 RAB17Q9H0T7 212 aa9.78□□□□□ -0.84
CD28-201ENST00000324106 C2orf40Q9H1Z8 148 aa9.78□□□□□ -0.84
CD28-201ENST00000324106 PPANQ9NQ55 473 aaKnown RBP9.78□□□□□ -0.84
CD28-201ENST00000324106 TLR7Q9NYK1 1049 aaKnown RBP9.78□□□□□ -0.84
CD28-201ENST00000324106 ZKSCAN5Q9Y2L8 839 aa9.78□□□□□ -0.84
CD28-201ENST00000324106 A0A0G2JLW4 131 aa9.78□□□□□ -0.84
CD28-201ENST00000324106 DENND3A2RUS2 1198 aa9.78□□□□□ -0.84
CD28-201ENST00000324106 SH2B2O14492 632 aaPredicted RBP9.78□□□□□ -0.84
CD28-201ENST00000324106 THAP12O43422 761 aa9.78□□□□□ -0.84
CD28-201ENST00000324106 PPP6R2O75170 966 aa9.78□□□□□ -0.84
CD28-201ENST00000324106 ENTPD3O75355 529 aa9.78□□□□□ -0.84
CD28-201ENST00000324106 NR2F2P24468 414 aa9.78□□□□□ -0.84
CD28-201ENST00000324106 CACNB3P54284 484 aa9.78□□□□□ -0.84
CD28-201ENST00000324106 ITKQ08881 620 aa9.78□□□□□ -0.84
CD28-201ENST00000324106 PSMD2Q13200 908 aa9.78□□□□□ -0.84
CD28-201ENST00000324106 MTMR1Q13613 665 aa9.78□□□□□ -0.84
CD28-201ENST00000324106 PRPSAP1Q14558 356 aa9.78□□□□□ -0.84
CD28-201ENST00000324106 MAPK6Q16659 721 aa9.78□□□□□ -0.84
CD28-201ENST00000324106 FAM83BQ5T0W9 1011 aa9.78□□□□□ -0.84
CD28-201ENST00000324106 SH3RF3Q8TEJ3 882 aaPredicted RBP9.78□□□□□ -0.84
CD28-201ENST00000324106 PSPC1Q8WXF1 523 aaKnown RBP9.78□□□□□ -0.84
CD28-201ENST00000324106 PUS7LQ9H0K6 701 aaKnown RBP9.78□□□□□ -0.84
CD28-201ENST00000324106 ZSWIM5Q9P217 1185 aa9.78□□□□□ -0.84
CD28-201ENST00000324106 KBTBD13C9JR72 458 aa9.78□□□□□ -0.84
CD28-201ENST00000324106 SRGAP2BP0DMP2 458 aa9.78□□□□□ -0.84
CD28-201ENST00000324106 PI16Q6UXB8 463 aa9.78□□□□□ -0.84
CD28-201ENST00000324106 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.78□□□□□ -0.84
CD28-201ENST00000324106 FAM20AQ96MK3 541 aa9.78□□□□□ -0.84
CD28-201ENST00000324106 NLRP4Q96MN2 994 aa9.78□□□□□ -0.84
CD28-201ENST00000324106 GPR101Q96P66 508 aaPredicted RBP9.78□□□□□ -0.84
CD28-201ENST00000324106 SLC39A2Q9NP94 309 aa9.78□□□□□ -0.84
CD28-201ENST00000324106 MYO1FO00160 1098 aa9.77□□□□□ -0.84
CD28-201ENST00000324106 BRD1O95696 1058 aa9.77□□□□□ -0.84
CD28-201ENST00000324106 LMNB1P20700 586 aa9.77□□□□□ -0.84
CD28-201ENST00000324106 CHRNA5P30532 468 aa9.77□□□□□ -0.84
CD28-201ENST00000324106 ORC2Q13416 577 aaPredicted RBP9.77□□□□□ -0.84
CD28-201ENST00000324106 SLC39A14Q15043 492 aa9.77□□□□□ -0.84
CD28-201ENST00000324106 TKFCQ3LXA3 575 aa9.77□□□□□ -0.84
CD28-201ENST00000324106 ARL6IP4Q66PJ3 421 aaKnown RBP9.77□□□□□ -0.84
CD28-201ENST00000324106 SIX6OS1Q8N1H7 587 aa9.77□□□□□ -0.84
CD28-201ENST00000324106 STAG1Q8WVM7 1258 aa9.77□□□□□ -0.84
CD28-201ENST00000324106 UBLCP1Q8WVY7 318 aaPredicted RBP9.77□□□□□ -0.84
CD28-201ENST00000324106 EXOC4Q96A65 974 aa9.77□□□□□ -0.84
CD28-201ENST00000324106 MTFR1LQ9H019 292 aa9.77□□□□□ -0.84
CD28-201ENST00000324106 LSG1Q9H089 658 aaKnown RBP9.77□□□□□ -0.84
CD28-201ENST00000324106 PCDHB4Q9Y5E5 795 aa9.77□□□□□ -0.84
CD28-201ENST00000324106 NCOA3Q9Y6Q9 1424 aa9.77□□□□□ -0.84
CD28-201ENST00000324106 DPYSL4O14531 572 aa9.77□□□□□ -0.85
CD28-201ENST00000324106 TWF2Q6IBS0 349 aaKnown RBP9.77□□□□□ -0.85
CD28-201ENST00000324106 PRR5LQ6MZQ0 368 aa9.77□□□□□ -0.85
CD28-201ENST00000324106 SPATA24Q86W54 205 aa9.77□□□□□ -0.85
CD28-201ENST00000324106 NDUFAF2Q8N183 169 aa9.77□□□□□ -0.85
CD28-201ENST00000324106 SYMPKQ92797 1274 aaKnown RBP9.77□□□□□ -0.85
CD28-201ENST00000324106 RPGRIP1Q96KN7 1286 aa9.77□□□□□ -0.85
CD28-201ENST00000324106 TRERF1Q96PN7 1200 aa9.77□□□□□ -0.85
CD28-201ENST00000324106 GINM1Q9NU53 330 aa9.77□□□□□ -0.85
CD28-201ENST00000324106 CNTNAP4Q9C0A0 1308 aa9.77□□□□□ -0.85
CD28-201ENST00000324106 EIF3CLB5ME19 914 aaKnown RBP9.77□□□□□ -0.85
CD28-201ENST00000324106 STK25O00506 426 aa9.77□□□□□ -0.85
CD28-201ENST00000324106 GSPT1P15170 499 aaKnown RBP9.77□□□□□ -0.85
CD28-201ENST00000324106 MCAMP43121 646 aa9.77□□□□□ -0.85
CD28-201ENST00000324106 TERF1P54274 439 aa9.77□□□□□ -0.85
CD28-201ENST00000324106 ARPP19P56211 112 aa9.77□□□□□ -0.85
CD28-201ENST00000324106 HUNKP57058 714 aa9.77□□□□□ -0.85
CD28-201ENST00000324106 COG2Q14746 738 aa9.77□□□□□ -0.85
CD28-201ENST00000324106 SPATA1Q5VX52 437 aa9.77□□□□□ -0.85
CD28-201ENST00000324106 RUFY4Q6ZNE9 571 aa9.77□□□□□ -0.85
CD28-201ENST00000324106 NME8Q8N427 588 aa9.77□□□□□ -0.85
CD28-201ENST00000324106 EIF3CQ99613 913 aaKnown RBP9.77□□□□□ -0.85
CD28-201ENST00000324106 SAMD15Q9P1V8 674 aa9.77□□□□□ -0.85
CD28-201ENST00000324106 SMIM23A6NLE4 172 aa9.77□□□□□ -0.85
CD28-201ENST00000324106 IFNB1P01574 187 aa9.77□□□□□ -0.85
CD28-201ENST00000324106 IGKV5-2P06315 115 aa9.77□□□□□ -0.85
CD28-201ENST00000324106 KCNJ6P48051 423 aa9.77□□□□□ -0.85
CD28-201ENST00000324106 CPLX4Q7Z7G2 160 aa9.77□□□□□ -0.85
CD28-201ENST00000324106 TTC39CQ8N584 583 aa9.77□□□□□ -0.85
CD28-201ENST00000324106 MB21D1Q8N884 522 aa9.77□□□□□ -0.85
CD28-201ENST00000324106 TRIM58Q8NG06 486 aa9.77□□□□□ -0.85
CD28-201ENST00000324106 F5H6K3 240 aa9.76□□□□□ -0.85
CD28-201ENST00000324106 ERCC3P19447 782 aa9.76□□□□□ -0.85
CD28-201ENST00000324106 LMNB2Q03252 620 aa9.76□□□□□ -0.85
CD28-201ENST00000324106 KLRC3Q07444 240 aa9.76□□□□□ -0.85
CD28-201ENST00000324106 SKIV2LQ15477 1246 aaKnown RBP9.76□□□□□ -0.85
CD28-201ENST00000324106 FYB2Q5VWT5 728 aa9.76□□□□□ -0.85
CD28-201ENST00000324106 NUDT18Q6ZVK8 323 aa9.76□□□□□ -0.85
CD28-201ENST00000324106 TBC1D16Q8TBP0 767 aa9.76□□□□□ -0.85
CD28-201ENST00000324106 ATP6V0A4Q9HBG4 840 aa9.76□□□□□ -0.85
CD28-201ENST00000324106 ALKQ9UM73 1620 aa9.76□□□□□ -0.85
CD28-201ENST00000324106 CPDO75976 1380 aa9.76□□□□□ -0.85
CD28-201ENST00000324106 SRGAP2CP0DJJ0 459 aa9.76□□□□□ -0.85
CD28-201ENST00000324106 CETPP11597 493 aa9.76□□□□□ -0.85
CD28-201ENST00000324106 SYT10Q6XYQ8 523 aa9.76□□□□□ -0.85
CD28-201ENST00000324106 BBOF1Q8ND07 529 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms