RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 USP17L11C9JVI0 530 aa24.8■■□□□ 1.56
PNKP-201ENST00000322344 USP17L18D6R9N7 530 aa24.8■■□□□ 1.56
PNKP-201ENST00000322344 USP17L22D6RA61 530 aa24.8■■□□□ 1.56
PNKP-201ENST00000322344 USP17L17D6RBQ6 530 aa24.8■■□□□ 1.56
PNKP-201ENST00000322344 USP17L19D6RCP7 530 aa24.8■■□□□ 1.56
PNKP-201ENST00000322344 USP17L20D6RJB6 530 aa24.8■■□□□ 1.56
PNKP-201ENST00000322344 USP17L24Q0WX57 530 aa24.8■■□□□ 1.56
PNKP-201ENST00000322344 KIF5AQ12840 1032 aa24.8■■□□□ 1.56
PNKP-201ENST00000322344 ZCWPW2Q504Y3 356 aa24.8■■□□□ 1.56
PNKP-201ENST00000322344 USP17L6PQ6QN14 398 aa24.8■■□□□ 1.56
PNKP-201ENST00000322344 ZNF622Q969S3 477 aaKnown RBP eCLIP24.8■■□□□ 1.56
PNKP-201ENST00000322344 RPGRIP1Q96KN7 1286 aa24.8■■□□□ 1.56
PNKP-201ENST00000322344 CEP63Q96MT8 703 aa24.8■■□□□ 1.56
PNKP-201ENST00000322344 SIPA1L1O43166 1804 aa24.8■■□□□ 1.56
PNKP-201ENST00000322344 ICA1Q05084 483 aa24.79■■□□□ 1.56
PNKP-201ENST00000322344 TCP10Q12799 353 aa24.79■■□□□ 1.56
PNKP-201ENST00000322344 GMCL1P1Q8NEA9 526 aa24.79■■□□□ 1.56
PNKP-201ENST00000322344 ST7Q9NRC1 585 aa24.79■■□□□ 1.56
PNKP-201ENST00000322344 SERPINA10Q9UK55 444 aa24.79■■□□□ 1.56
PNKP-201ENST00000322344 STK24Q9Y6E0 443 aa24.79■■□□□ 1.56
PNKP-201ENST00000322344 MYH7BA7E2Y1 1941 aa24.79■■□□□ 1.56
PNKP-201ENST00000322344 USO1O60763 962 aaKnown RBP24.79■■□□□ 1.56
PNKP-201ENST00000322344 GNA14O95837 355 aa24.79■■□□□ 1.56
PNKP-201ENST00000322344 PLA2G4BP0C869 781 aa24.79■■□□□ 1.56
PNKP-201ENST00000322344 RBM5P52756 815 aaKnown RBP eCLIP24.79■■□□□ 1.56
PNKP-201ENST00000322344 CKAP4Q07065 602 aaKnown RBP24.79■■□□□ 1.56
PNKP-201ENST00000322344 AMNQ9BXJ7 453 aa24.79■■□□□ 1.56
PNKP-201ENST00000322344 COL4A3BPQ9Y5P4 624 aa24.79■■□□□ 1.56
PNKP-201ENST00000322344 TBX3O15119 743 aa24.78■■□□□ 1.56
PNKP-201ENST00000322344 NKRFO15226 690 aaKnown RBP eCLIP24.78■■□□□ 1.56
PNKP-201ENST00000322344 RAD21O60216 631 aa24.78■■□□□ 1.56
PNKP-201ENST00000322344 LRRC41Q15345 812 aa24.78■■□□□ 1.56
PNKP-201ENST00000322344 HAUS3Q68CZ6 603 aa24.78■■□□□ 1.56
PNKP-201ENST00000322344 STYK1Q6J9G0 422 aa24.78■■□□□ 1.56
PNKP-201ENST00000322344 MSL3Q8N5Y2 521 aaKnown RBP24.78■■□□□ 1.56
PNKP-201ENST00000322344 GMCL1Q96IK5 515 aa24.78■■□□□ 1.56
PNKP-201ENST00000322344 MMRN2Q9H8L6 949 aa24.78■■□□□ 1.56
PNKP-201ENST00000322344 KIAA1024Q9UPX6 916 aa24.78■■□□□ 1.56
PNKP-201ENST00000322344 MAP2K7O14733 419 aa24.78■■□□□ 1.56
PNKP-201ENST00000322344 ECE2O60344 883 aa24.78■■□□□ 1.56
PNKP-201ENST00000322344 LCA5LO95447 670 aa24.78■■□□□ 1.56
PNKP-201ENST00000322344 CACNB3P54284 484 aa24.78■■□□□ 1.56
PNKP-201ENST00000322344 SH3BP5LQ7L8J4 393 aa24.78■■□□□ 1.56
PNKP-201ENST00000322344 PNKPQ96T60 521 aa24.78■■□□□ 1.56
PNKP-201ENST00000322344 LACRTQ9GZZ8 138 aa24.78■■□□□ 1.56
PNKP-201ENST00000322344 KCNQ5Q9NR82 932 aa24.78■■□□□ 1.56
PNKP-201ENST00000322344 FAM207AQ9NSI2 230 aaPredicted RBP24.78■■□□□ 1.56
PNKP-201ENST00000322344 MEIS2O14770 477 aa24.77■■□□□ 1.56
PNKP-201ENST00000322344 FOSP01100 380 aaPredicted RBP24.77■■□□□ 1.56
PNKP-201ENST00000322344 ATP1A1P05023 1023 aaKnown RBP24.77■■□□□ 1.56
PNKP-201ENST00000322344 SSBP05455 408 aaKnown RBP eCLIP24.77■■□□□ 1.56
PNKP-201ENST00000322344 SMC1AQ14683 1233 aaKnown RBP24.77■■□□□ 1.56
PNKP-201ENST00000322344 BEND6Q5SZJ8 279 aaPredicted RBP24.77■■□□□ 1.56
PNKP-201ENST00000322344 NCAPH2Q6IBW4 605 aa24.77■■□□□ 1.56
PNKP-201ENST00000322344 C2CD5Q86YS7 1000 aa24.77■■□□□ 1.56
PNKP-201ENST00000322344 NEK11Q8NG66 645 aa24.77■■□□□ 1.56
PNKP-201ENST00000322344 CRYGNQ8WXF5 182 aa24.77■■□□□ 1.56
PNKP-201ENST00000322344 SECISBP2LQ93073 1101 aaKnown RBP24.77■■□□□ 1.56
PNKP-201ENST00000322344 PITPNM2Q9BZ72 1349 aa24.77■■□□□ 1.56
PNKP-201ENST00000322344 ARFGEF1Q9Y6D6 1849 aa24.77■■□□□ 1.56
PNKP-201ENST00000322344 RCCD1A6NED2 376 aa24.76■■□□□ 1.55
PNKP-201ENST00000322344 E9PMD0 336 aa24.76■■□□□ 1.55
PNKP-201ENST00000322344 SLURP2P0DP57 97 aa24.76■■□□□ 1.55
PNKP-201ENST00000322344 ABCB5Q2M3G0 1257 aa24.76■■□□□ 1.55
PNKP-201ENST00000322344 HDXQ7Z353 690 aa24.76■■□□□ 1.55
PNKP-201ENST00000322344 SIAH1Q8IUQ4 282 aa24.76■■□□□ 1.55
PNKP-201ENST00000322344 TXLNBQ8N3L3 684 aa24.76■■□□□ 1.55
PNKP-201ENST00000322344 GJA10Q969M2 543 aa24.76■■□□□ 1.55
PNKP-201ENST00000322344 NUCKS1Q9H1E3 243 aaKnown RBP24.76■■□□□ 1.55
PNKP-201ENST00000322344 ARHGAP20Q9P2F6 1191 aa24.76■■□□□ 1.55
PNKP-201ENST00000322344 FAM196BA6NMK8 535 aa24.76■■□□□ 1.55
PNKP-201ENST00000322344 F5H6K3 240 aa24.76■■□□□ 1.55
PNKP-201ENST00000322344 TRAF5O00463 557 aa24.76■■□□□ 1.55
PNKP-201ENST00000322344 ARHGAP4P98171 946 aa24.76■■□□□ 1.55
PNKP-201ENST00000322344 KLRC3Q07444 240 aa24.76■■□□□ 1.55
PNKP-201ENST00000322344 Q4G0T1 1027 aa24.76■■□□□ 1.55
PNKP-201ENST00000322344 CCDC40Q4G0X9 1142 aa24.76■■□□□ 1.55
PNKP-201ENST00000322344 WDR93Q6P2C0 686 aa24.76■■□□□ 1.55
PNKP-201ENST00000322344 GPBP1Q86WP2 473 aa24.76■■□□□ 1.55
PNKP-201ENST00000322344 GLIS3Q8NEA6 775 aa24.76■■□□□ 1.55
PNKP-201ENST00000322344 ERMNQ8TAM6 284 aa24.76■■□□□ 1.55
PNKP-201ENST00000322344 PCDHA2Q9Y5H9 948 aa24.76■■□□□ 1.55
PNKP-201ENST00000322344 POTEB3A0JP26 581 aa24.75■■□□□ 1.55
PNKP-201ENST00000322344 POTECB2RU33 542 aa24.75■■□□□ 1.55
PNKP-201ENST00000322344 ENC1O14682 589 aa24.75■■□□□ 1.55
PNKP-201ENST00000322344 ENTPD3O75355 529 aa24.75■■□□□ 1.55
PNKP-201ENST00000322344 RHOXF2BP0C7M4 288 aa24.75■■□□□ 1.55
PNKP-201ENST00000322344 MCM3P25205 808 aa24.75■■□□□ 1.55
PNKP-201ENST00000322344 MMP14P50281 582 aa24.75■■□□□ 1.55
PNKP-201ENST00000322344 MARSP56192 900 aaKnown RBP24.75■■□□□ 1.55
PNKP-201ENST00000322344 POTEBQ6S5H4 581 aa24.75■■□□□ 1.55
PNKP-201ENST00000322344 FBXO11Q86XK2 927 aa24.75■■□□□ 1.55
PNKP-201ENST00000322344 RHOXF2Q9BQY4 288 aa24.75■■□□□ 1.55
PNKP-201ENST00000322344 TFR2Q9UP52 801 aa24.75■■□□□ 1.55
PNKP-201ENST00000322344 FRMD3A2A2Y4 597 aa24.74■■□□□ 1.55
PNKP-201ENST00000322344 H0YIN7 160 aa24.74■■□□□ 1.55
PNKP-201ENST00000322344 EPHB6O15197 1021 aa24.74■■□□□ 1.55
PNKP-201ENST00000322344 TFRCP02786 760 aaKnown RBP24.74■■□□□ 1.55
PNKP-201ENST00000322344 CYP11B2P19099 503 aa24.74■■□□□ 1.55
PNKP-201ENST00000322344 KIF11P52732 1056 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms