RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 DPEP1P16444 411 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 EIF4A3P38919 411 aaKnown RBP12.11□□□□□ -0.47
TOP3A-201ENST00000321105 EXOC3L4Q17RC7 722 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 TEKT3Q9BXF9 490 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 TRIM9Q9C026 710 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 ANKFY1Q9P2R3 1169 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 TACC3Q9Y6A5 838 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 SPOPO43791 374 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 FTCDO95954 541 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 FOSP01100 380 aaPredicted RBP12.11□□□□□ -0.47
TOP3A-201ENST00000321105 KLK7P49862 253 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 GPR162Q16538 588 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 SULF1Q8IWU6 871 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 CCDC155Q8N6L0 562 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 DHTKD1Q96HY7 919 aaPredicted RBP12.11□□□□□ -0.47
TOP3A-201ENST00000321105 USTQ9Y2C2 406 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 CSADQ9Y600 493 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 MFAP3LO75121 409 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 CCZ1BP86790 482 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 CCZ1P86791 482 aaPredicted RBP12.11□□□□□ -0.47
TOP3A-201ENST00000321105 RCSD1Q6JBY9 416 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 VTI1AQ96AJ9 217 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 IMPG2Q9BZV3 1241 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 HDAC6Q9UBN7 1215 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 TRIM10Q9UDY6 481 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 ANAPC4Q9UJX5 808 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 ANKRD62A6NC57 917 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 KCNK3O14649 394 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 NDUFA10O95299 355 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 ASNSP08243 561 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 KRT19P08727 400 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 CAPN2P17655 700 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 MARK3P27448 753 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 PPP1R2P41236 205 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 GUCY2FP51841 1108 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 MB21D1Q8N884 522 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 MRRFQ96E11 262 aaKnown RBP12.11□□□□□ -0.47
TOP3A-201ENST00000321105 AGPAT5Q9NUQ2 364 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 TUBE1Q9UJT0 475 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 C8orf74Q6P047 294 aa12.1□□□□□ -0.47
TOP3A-201ENST00000321105 PAF1Q8N7H5 531 aa12.1□□□□□ -0.47
TOP3A-201ENST00000321105 MTA3Q9BTC8 594 aa12.1□□□□□ -0.47
TOP3A-201ENST00000321105 MOCS3O95396 460 aa12.1□□□□□ -0.47
TOP3A-201ENST00000321105 EEF1GP26641 437 aaKnown RBP12.1□□□□□ -0.47
TOP3A-201ENST00000321105 STRIP1Q5VSL9 837 aa12.1□□□□□ -0.47
TOP3A-201ENST00000321105 SND1Q7KZF4 910 aaKnown RBP eCLIP12.1□□□□□ -0.47
TOP3A-201ENST00000321105 DYDC1Q8WWB3 177 aa12.1□□□□□ -0.47
TOP3A-201ENST00000321105 IFT74Q96LB3 600 aa12.1□□□□□ -0.47
TOP3A-201ENST00000321105 KNDC1Q76NI1 1749 aa12.1□□□□□ -0.47
TOP3A-201ENST00000321105 MYMKA6NI61 221 aa12.1□□□□□ -0.47
TOP3A-201ENST00000321105 POLRMTO00411 1230 aaKnown RBP12.1□□□□□ -0.47
TOP3A-201ENST00000321105 GFPT2O94808 682 aa12.1□□□□□ -0.47
TOP3A-201ENST00000321105 CCDC172P0C7W6 258 aa12.1□□□□□ -0.47
TOP3A-201ENST00000321105 STAT1P42224 750 aa12.1□□□□□ -0.47
TOP3A-201ENST00000321105 VPS41P49754 854 aa12.1□□□□□ -0.47
TOP3A-201ENST00000321105 OSTNP61366 133 aa12.1□□□□□ -0.47
TOP3A-201ENST00000321105 FBXO38Q6PIJ6 1188 aa12.1□□□□□ -0.47
TOP3A-201ENST00000321105 RTKN2Q8IZC4 609 aa12.1□□□□□ -0.47
TOP3A-201ENST00000321105 UHMK1Q8TAS1 419 aaKnown RBP12.1□□□□□ -0.47
TOP3A-201ENST00000321105 DYDC2Q96IM9 177 aa12.1□□□□□ -0.47
TOP3A-201ENST00000321105 NHEJ1Q9H9Q4 299 aaPredicted RBP12.1□□□□□ -0.47
TOP3A-201ENST00000321105 MLXIPQ9HAP2 919 aa12.1□□□□□ -0.47
TOP3A-201ENST00000321105 SH3GLB2Q9NR46 395 aa12.1□□□□□ -0.47
TOP3A-201ENST00000321105 MED1Q15648 1581 aaPredicted RBP12.09□□□□□ -0.47
TOP3A-201ENST00000321105 SALL1Q9NSC2 1324 aa12.09□□□□□ -0.47
TOP3A-201ENST00000321105 HNRNPDLO14979 420 aaKnown RBP12.09□□□□□ -0.47
TOP3A-201ENST00000321105 DPYDQ12882 1025 aa12.09□□□□□ -0.47
TOP3A-201ENST00000321105 CEP170P1Q96L14 293 aa12.09□□□□□ -0.47
TOP3A-201ENST00000321105 RMDN3Q96TC7 470 aa12.09□□□□□ -0.47
TOP3A-201ENST00000321105 SELENOOQ9BVL4 669 aa12.09□□□□□ -0.47
TOP3A-201ENST00000321105 SPZ1Q9BXG8 430 aa12.09□□□□□ -0.47
TOP3A-201ENST00000321105 SEPT9Q9UHD8 586 aaPredicted RBP12.09□□□□□ -0.47
TOP3A-201ENST00000321105 CD19P15391 556 aa12.09□□□□□ -0.47
TOP3A-201ENST00000321105 HPDP32754 393 aaPredicted RBP12.09□□□□□ -0.47
TOP3A-201ENST00000321105 RCAN1P53805 252 aa12.09□□□□□ -0.47
TOP3A-201ENST00000321105 MTERF2Q49AM1 385 aa12.09□□□□□ -0.47
TOP3A-201ENST00000321105 PEX26Q7Z412 305 aa12.09□□□□□ -0.47
TOP3A-201ENST00000321105 DAAM2Q86T65 1068 aa12.09□□□□□ -0.47
TOP3A-201ENST00000321105 CYP2W1Q8TAV3 490 aa12.09□□□□□ -0.47
TOP3A-201ENST00000321105 STK17AQ9UEE5 414 aa12.09□□□□□ -0.47
TOP3A-201ENST00000321105 GCFC2P16383 781 aaKnown RBP12.09□□□□□ -0.47
TOP3A-201ENST00000321105 VAV2P52735 878 aa12.09□□□□□ -0.47
TOP3A-201ENST00000321105 HMGCS2P54868 508 aa12.09□□□□□ -0.47
TOP3A-201ENST00000321105 PEX3P56589 373 aa12.09□□□□□ -0.47
TOP3A-201ENST00000321105 PPP4CP60510 307 aa12.09□□□□□ -0.47
TOP3A-201ENST00000321105 NCBP1Q09161 790 aaKnown RBP12.09□□□□□ -0.47
TOP3A-201ENST00000321105 COASYQ13057 564 aa12.09□□□□□ -0.47
TOP3A-201ENST00000321105 IFI16Q16666 785 aaKnown RBP12.09□□□□□ -0.47
TOP3A-201ENST00000321105 MAN2A1Q16706 1144 aa12.09□□□□□ -0.47
TOP3A-201ENST00000321105 CERS5Q8N5B7 392 aa12.09□□□□□ -0.47
TOP3A-201ENST00000321105 TAB3Q8N5C8 712 aaPredicted RBP12.09□□□□□ -0.47
TOP3A-201ENST00000321105 POMGNT1Q8WZA1 660 aa12.09□□□□□ -0.47
TOP3A-201ENST00000321105 LTN1O94822 1766 aa12.08□□□□□ -0.47
TOP3A-201ENST00000321105 POTEB2H3BUK9 544 aa12.08□□□□□ -0.48
TOP3A-201ENST00000321105 GYS2P54840 703 aa12.08□□□□□ -0.48
TOP3A-201ENST00000321105 SMC1AQ14683 1233 aaKnown RBP12.08□□□□□ -0.48
TOP3A-201ENST00000321105 FAM186BQ8IYM0 893 aa12.08□□□□□ -0.48
TOP3A-201ENST00000321105 ABHD10Q9NUJ1 306 aa12.08□□□□□ -0.48
TOP3A-201ENST00000321105 CWC15Q9P013 229 aaKnown RBP12.08□□□□□ -0.48
TOP3A-201ENST00000321105 RSPH14Q9UHP6 348 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms