RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 CAPNS2Q96L46 248 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 PCMTD1Q96MG8 357 aaPredicted RBP3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 RPAP3Q9H6T3 665 aaPredicted RBP3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 ELP3Q9H9T3 547 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 C6orf50Q9HD87 102 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 RIC8AQ9NPQ8 531 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 ADD3Q9UEY8 706 aaKnown RBP3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 STX8Q9UNK0 236 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 CTDP1Q9Y5B0 961 aaPredicted RBP3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 ZSWIM8A7E2V4 1837 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 RPTORQ8N122 1335 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 CYP2D7A0A087X1C5 515 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 VWA5AO00534 786 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 TBX3O15119 743 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 NKRFO15226 690 aaKnown RBP eCLIP3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 TLR2O60603 784 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 RPLP2P05387 115 aaKnown RBP3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 CYP3A4P08684 503 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 HSD17B4P51659 736 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 SETQ01105 290 aaPredicted RBP3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 RRP1BQ14684 758 aaKnown RBP3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 KIF22Q14807 665 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 SAFBQ15424 915 aaKnown RBP eCLIP3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 RRP12Q5JTH9 1297 aaKnown RBP3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 CLEC17AQ6ZS10 378 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 FBXO11Q86XK2 927 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 GIMAP8Q8ND71 665 aaPredicted RBP3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 RDM1Q8NG50 284 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 CDHR1Q96JP9 859 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 PYM1Q9BRP8 204 aaKnown RBP3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 ACAD9Q9H845 621 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 Q9Y3F1 56 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 GDF11O95390 407 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 SCP2P22307 547 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 HERVK_113P62684 666 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 SPP2Q13103 211 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 SLFNL1Q499Z3 407 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 SLC44A5Q8NCS7 719 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 NSUN7Q8NE18 718 aaKnown RBP3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 WHAMMQ8TF30 809 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 TMX3Q96JJ7 454 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 PRR12Q9ULL5 1215 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 MYH7BA7E2Y1 1941 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 WDR81Q562E7 1941 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 A0A1W2PRG0 241 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 ASB14A6NK59 587 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 CHGBP05060 677 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 FBXO45P0C2W1 286 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 GJA5P36382 358 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 SCTRP47872 440 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 USP11P51784 963 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 FAM47AQ5JRC9 791 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 C17orf99Q6UX52 265 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 MAMDC4Q6UXC1 1216 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 GPRC5AQ8NFJ5 357 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 BRI3BPQ8WY22 251 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 MBOAT7Q96N66 472 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 PRDM10Q9NQV6 1147 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 TPCN1Q9ULQ1 816 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 ABT1Q9ULW3 272 aaKnown RBP3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 CEP131Q9UPN4 1083 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 SMC3Q9UQE7 1217 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 CYP3A7-CYP3A51PA0A087WV96 503 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 UBE2Q2LH0YL09 131 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 PDHXO00330 501 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 IGHA2P01877 340 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 CYP3A7P24462 503 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 CIITAP33076 1130 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 FCGRTP55899 365 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 ERVK-9P63128 1117 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 ERVK-24P63145 666 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 SCRN1Q12765 414 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 POU4F2Q12837 409 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 GRB14Q14449 540 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 CDC37Q16543 378 aaPredicted RBP3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 MIGA2Q7L4E1 593 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 ADGRF4Q8IZF3 695 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 NUP133Q8WUM0 1156 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 ZKSCAN4Q969J2 545 aaPredicted RBP3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 GTPBP3Q969Y2 492 aaKnown RBP3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 PHF20Q9BVI0 1012 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 GTPBP4Q9BZE4 634 aaKnown RBP3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 ASCC2Q9H1I8 757 aaPredicted RBP3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 JMJD4Q9H9V9 463 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 ZNF214Q9UL59 606 aaPredicted RBP3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 BRPF3Q9ULD4 1205 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 NOL7Q9UMY1 257 aaKnown RBP3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 PCDHA4Q9UN74 947 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 PCDHB11Q9Y5F2 797 aa3.77□□□□□ -1.81
SCAMP1-201ENST00000320280 NFASCO94856 1347 aa3.76□□□□□ -1.81
SCAMP1-201ENST00000320280 DNAJC25-GNG10A0A024R161 153 aa3.76□□□□□ -1.81
SCAMP1-201ENST00000320280 RBM47A0AV96 593 aaKnown RBP3.76□□□□□ -1.81
SCAMP1-201ENST00000320280 BTBD19C9JJ37 291 aa3.76□□□□□ -1.81
SCAMP1-201ENST00000320280 TMEM232C9JQI7 657 aa3.76□□□□□ -1.81
SCAMP1-201ENST00000320280 STXBP3O00186 592 aa3.76□□□□□ -1.81
SCAMP1-201ENST00000320280 TRAF5O00463 557 aa3.76□□□□□ -1.81
SCAMP1-201ENST00000320280 U2AF2P26368 475 aaKnown RBP eCLIP3.76□□□□□ -1.81
SCAMP1-201ENST00000320280 ICAM3P32942 547 aa3.76□□□□□ -1.81
SCAMP1-201ENST00000320280 DDIT3P35638 169 aa3.76□□□□□ -1.81
SCAMP1-201ENST00000320280 PRPHP41219 470 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms