RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 MARCKSP29966 332 aaPredicted RBP15.39■□□□□ 0.05
PRPF18-201ENST00000320054 ICAM3P32942 547 aa15.39■□□□□ 0.05
PRPF18-201ENST00000320054 MTMR1Q13613 665 aa15.39■□□□□ 0.05
PRPF18-201ENST00000320054 ARHGEF6Q15052 776 aa15.39■□□□□ 0.05
PRPF18-201ENST00000320054 AXDND1Q5T1B0 1012 aaPredicted RBP15.39■□□□□ 0.05
PRPF18-201ENST00000320054 ADALQ6DHV7 355 aa15.39■□□□□ 0.05
PRPF18-201ENST00000320054 DTHD1Q6ZMT9 781 aa15.39■□□□□ 0.05
PRPF18-201ENST00000320054 NPLOC4Q8TAT6 608 aa15.39■□□□□ 0.05
PRPF18-201ENST00000320054 SLC5A5Q92911 643 aa15.39■□□□□ 0.05
PRPF18-201ENST00000320054 ERO1AQ96HE7 468 aa15.39■□□□□ 0.05
PRPF18-201ENST00000320054 APBA2Q99767 749 aa15.39■□□□□ 0.05
PRPF18-201ENST00000320054 WDR11Q9BZH6 1224 aa15.39■□□□□ 0.05
PRPF18-201ENST00000320054 ARHGAP39Q9C0H5 1083 aa15.39■□□□□ 0.05
PRPF18-201ENST00000320054 LMBRD1Q9NUN5 540 aa15.39■□□□□ 0.05
PRPF18-201ENST00000320054 MRVI1Q9Y6F6 885 aa15.39■□□□□ 0.05
PRPF18-201ENST00000320054 SYNGAP1Q96PV0 1343 aa15.39■□□□□ 0.05
PRPF18-201ENST00000320054 A0A1W2PQ27 194 aa15.38■□□□□ 0.05
PRPF18-201ENST00000320054 A0A1W2PQ64 194 aa15.38■□□□□ 0.05
PRPF18-201ENST00000320054 A0A1W2PQD8 194 aa15.38■□□□□ 0.05
PRPF18-201ENST00000320054 MARCH6O60337 910 aa15.38■□□□□ 0.05
PRPF18-201ENST00000320054 RGS20O76081 388 aa15.38■□□□□ 0.05
PRPF18-201ENST00000320054 ARP10275 920 aa15.38■□□□□ 0.05
PRPF18-201ENST00000320054 FXR2P51116 673 aaKnown RBP eCLIP15.38■□□□□ 0.05
PRPF18-201ENST00000320054 UBE2HP62256 183 aa15.38■□□□□ 0.05
PRPF18-201ENST00000320054 IRF5Q13568 498 aa15.38■□□□□ 0.05
PRPF18-201ENST00000320054 OLFML2BQ68BL8 750 aa15.38■□□□□ 0.05
PRPF18-201ENST00000320054 ARMCX2Q7L311 632 aa15.38■□□□□ 0.05
PRPF18-201ENST00000320054 ZFP91Q96JP5 570 aaPredicted RBP15.38■□□□□ 0.05
PRPF18-201ENST00000320054 RIT2Q99578 217 aa15.38■□□□□ 0.05
PRPF18-201ENST00000320054 TINF2Q9BSI4 451 aa15.38■□□□□ 0.05
PRPF18-201ENST00000320054 AGO4Q9HCK5 861 aaKnown RBP15.38■□□□□ 0.05
PRPF18-201ENST00000320054 KCNH7Q9NS40 1196 aa15.38■□□□□ 0.05
PRPF18-201ENST00000320054 GOLGA6L4A6NEF3 574 aa15.37■□□□□ 0.05
PRPF18-201ENST00000320054 SPATA31C2B4DYI2 1134 aa15.37■□□□□ 0.05
PRPF18-201ENST00000320054 IGHA2P01877 340 aa15.37■□□□□ 0.05
PRPF18-201ENST00000320054 HOXD10P28358 340 aa15.37■□□□□ 0.05
PRPF18-201ENST00000320054 LONP1P36776 959 aaKnown RBP15.37■□□□□ 0.05
PRPF18-201ENST00000320054 TXKP42681 527 aa15.37■□□□□ 0.05
PRPF18-201ENST00000320054 PDIA5Q14554 519 aa15.37■□□□□ 0.05
PRPF18-201ENST00000320054 NFKBIBQ15653 356 aa15.37■□□□□ 0.05
PRPF18-201ENST00000320054 IL17AQ16552 155 aa15.37■□□□□ 0.05
PRPF18-201ENST00000320054 TMEM266Q2M3C6 531 aa15.37■□□□□ 0.05
PRPF18-201ENST00000320054 KCNV1Q6PIU1 500 aa15.37■□□□□ 0.05
PRPF18-201ENST00000320054 CD99L2Q8TCZ2 262 aa15.37■□□□□ 0.05
PRPF18-201ENST00000320054 AK8Q96MA6 479 aa15.37■□□□□ 0.05
PRPF18-201ENST00000320054 ZNF577Q9BSK1 485 aa15.37■□□□□ 0.05
PRPF18-201ENST00000320054 RAB34Q9BZG1 259 aa15.37■□□□□ 0.05
PRPF18-201ENST00000320054 TTC12Q9H892 705 aaPredicted RBP15.37■□□□□ 0.05
PRPF18-201ENST00000320054 VTA1Q9NP79 307 aa15.37■□□□□ 0.05
PRPF18-201ENST00000320054 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.37■□□□□ 0.05
PRPF18-201ENST00000320054 PCDHA12Q9UN75 941 aa15.37■□□□□ 0.05
PRPF18-201ENST00000320054 LOXHD1Q8IVV2 1947 aa15.37■□□□□ 0.05
PRPF18-201ENST00000320054 VWA3AA6NCI4 1184 aa15.36■□□□□ 0.05
PRPF18-201ENST00000320054 IPO5O00410 1097 aaKnown RBP15.36■□□□□ 0.05
PRPF18-201ENST00000320054 GADD45BO75293 160 aaPredicted RBP15.36■□□□□ 0.05
PRPF18-201ENST00000320054 PSMD10O75832 226 aa15.36■□□□□ 0.05
PRPF18-201ENST00000320054 ECM2O94769 699 aaPredicted RBP15.36■□□□□ 0.05
PRPF18-201ENST00000320054 TGFB3P10600 412 aa15.36■□□□□ 0.05
PRPF18-201ENST00000320054 CYP2B6P20813 491 aa15.36■□□□□ 0.05
PRPF18-201ENST00000320054 CMA1P23946 247 aa15.36■□□□□ 0.05
PRPF18-201ENST00000320054 CAP1Q01518 475 aa15.36■□□□□ 0.05
PRPF18-201ENST00000320054 SEMA3FQ13275 785 aa15.36■□□□□ 0.05
PRPF18-201ENST00000320054 TRMT44Q8IYL2 757 aaKnown RBP15.36■□□□□ 0.05
PRPF18-201ENST00000320054 IGSF22Q8N9C0 903 aa15.36■□□□□ 0.05
PRPF18-201ENST00000320054 ZNF296Q8WUU4 475 aaPredicted RBP15.36■□□□□ 0.05
PRPF18-201ENST00000320054 CSRNP2Q9H175 543 aa15.36■□□□□ 0.05
PRPF18-201ENST00000320054 TBC1D22BQ9NU19 505 aa15.36■□□□□ 0.05
PRPF18-201ENST00000320054 DDX49Q9Y6V7 483 aaKnown RBP15.36■□□□□ 0.05
PRPF18-201ENST00000320054 MYH9P35579 1960 aaKnown RBP15.36■□□□□ 0.05
PRPF18-201ENST00000320054 NFASCO94856 1347 aa15.36■□□□□ 0.05
PRPF18-201ENST00000320054 FAM237AA0A1B0GTK4 181 aa15.35■□□□□ 0.05
PRPF18-201ENST00000320054 RBM47A0AV96 593 aaKnown RBP15.35■□□□□ 0.05
PRPF18-201ENST00000320054 DHX15O43143 795 aaKnown RBP15.35■□□□□ 0.05
PRPF18-201ENST00000320054 SNAI1O95863 264 aaPredicted RBP15.35■□□□□ 0.05
PRPF18-201ENST00000320054 KCNA2P16389 499 aa15.35■□□□□ 0.05
PRPF18-201ENST00000320054 FLT3LGP49771 235 aa15.35■□□□□ 0.05
PRPF18-201ENST00000320054 PRMT2P55345 433 aa15.35■□□□□ 0.05
PRPF18-201ENST00000320054 GRIN1Q05586 938 aa15.35■□□□□ 0.05
PRPF18-201ENST00000320054 LRCH2Q5VUJ6 765 aa15.35■□□□□ 0.05
PRPF18-201ENST00000320054 RESP18Q5W5W9 173 aa15.35■□□□□ 0.05
PRPF18-201ENST00000320054 CLIC6Q96NY7 704 aa15.35■□□□□ 0.05
PRPF18-201ENST00000320054 SENP7Q9BQF6 1050 aa15.35■□□□□ 0.05
PRPF18-201ENST00000320054 TEKT3Q9BXF9 490 aa15.35■□□□□ 0.05
PRPF18-201ENST00000320054 KATNBL1Q9H079 304 aa15.35■□□□□ 0.05
PRPF18-201ENST00000320054 ABHD16BQ9H3Z7 469 aa15.35■□□□□ 0.05
PRPF18-201ENST00000320054 SRRDQ9UH36 339 aa15.35■□□□□ 0.05
PRPF18-201ENST00000320054 VAV3Q9UKW4 847 aa15.35■□□□□ 0.05
PRPF18-201ENST00000320054 GABRQQ9UN88 632 aa15.35■□□□□ 0.05
PRPF18-201ENST00000320054 GAS7O60861 476 aa15.34■□□□□ 0.05
PRPF18-201ENST00000320054 TECP42680 631 aa15.34■□□□□ 0.05
PRPF18-201ENST00000320054 PRKCZQ05513 592 aa15.34■□□□□ 0.05
PRPF18-201ENST00000320054 SPIRE1Q08AE8 756 aa15.34■□□□□ 0.05
PRPF18-201ENST00000320054 ITGB3BPQ13352 177 aaPredicted RBP15.34■□□□□ 0.05
PRPF18-201ENST00000320054 PPP2R5CQ13362 524 aa15.34■□□□□ 0.05
PRPF18-201ENST00000320054 SHC4Q6S5L8 630 aa15.34■□□□□ 0.05
PRPF18-201ENST00000320054 B3GNT9Q6UX72 402 aa15.34■□□□□ 0.05
PRPF18-201ENST00000320054 SEPT14Q6ZU15 432 aa15.34■□□□□ 0.05
PRPF18-201ENST00000320054 GIMAP8Q8ND71 665 aaPredicted RBP15.34■□□□□ 0.05
PRPF18-201ENST00000320054 SCFD2Q8WU76 684 aa15.34■□□□□ 0.05
PRPF18-201ENST00000320054 MRPS27Q92552 414 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms