RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 FAM182BQ5T319 152 aa10.61□□□□□ -0.71
RPGR-201ENST00000318842 CCDC70Q6NSX1 233 aa10.61□□□□□ -0.71
RPGR-201ENST00000318842 FAM228AQ86W67 206 aa10.61□□□□□ -0.71
RPGR-201ENST00000318842 MMGT1Q8N4V1 131 aa10.61□□□□□ -0.71
RPGR-201ENST00000318842 NSUN4Q96CB9 384 aaKnown RBP10.61□□□□□ -0.71
RPGR-201ENST00000318842 ZNF512BQ96KM6 892 aaPredicted RBP10.61□□□□□ -0.71
RPGR-201ENST00000318842 OSBPL7Q9BZF2 842 aa10.61□□□□□ -0.71
RPGR-201ENST00000318842 BLOC1S4Q9NUP1 217 aa10.61□□□□□ -0.71
RPGR-201ENST00000318842 PLAGL2Q9UPG8 496 aa10.61□□□□□ -0.71
RPGR-201ENST00000318842 CENPFP49454 3210 aa10.61□□□□□ -0.71
RPGR-201ENST00000318842 TRPM3Q9HCF6 1732 aaPredicted RBP10.61□□□□□ -0.71
RPGR-201ENST00000318842 SMCO2A6NFE2 343 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 STXBP3O00186 592 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 NOL4O94818 638 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 GNAT2P19087 354 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 SLC16A2P36021 539 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 HSD17B3P37058 310 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 CRKLP46109 303 aaKnown RBP10.6□□□□□ -0.71
RPGR-201ENST00000318842 GRB10Q13322 594 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 SHROOM1Q2M3G4 852 aaPredicted RBP10.6□□□□□ -0.71
RPGR-201ENST00000318842 CCDC40Q4G0X9 1142 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 TBC1D10BQ4KMP7 808 aaPredicted RBP10.6□□□□□ -0.71
RPGR-201ENST00000318842 AMOTL1Q8IY63 956 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 ZNF34Q8IZ26 560 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 IQCKQ8N0W5 287 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 LRRC47Q8N1G4 583 aaKnown RBP10.6□□□□□ -0.71
RPGR-201ENST00000318842 SLC40A1Q9NP59 571 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 GRID2IPA4D2P6 1211 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 E9PMD0 336 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 PPP1R37O75864 691 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 SHBGP04278 402 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 SLC9A1P19634 815 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 TNNI2P48788 182 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 ITPK1Q13572 414 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 TUBB2AQ13885 445 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 TMED8Q6PL24 325 aaPredicted RBP10.6□□□□□ -0.71
RPGR-201ENST00000318842 BRINP3Q76B58 766 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 NOC3LQ8WTT2 800 aaKnown RBP10.6□□□□□ -0.71
RPGR-201ENST00000318842 DDX12PQ92771 950 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 N4BP2L2Q92802 583 aaPredicted RBP10.6□□□□□ -0.71
RPGR-201ENST00000318842 CYFIP2Q96F07 1278 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 THOC1Q96FV9 657 aaKnown RBP10.6□□□□□ -0.71
RPGR-201ENST00000318842 CCDC114Q96M63 670 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 ALS2CR12Q96Q35 445 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 TUBB2BQ9BVA1 445 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 GOPCQ9HD26 462 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 TCP11L1Q9NUJ3 509 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 DNAJC17Q9NVM6 304 aaKnown RBP10.6□□□□□ -0.71
RPGR-201ENST00000318842 FBXL5Q9UKA1 691 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 KLRF2D3W0D1 207 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 GOLGA8KD6RF30 607 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 TTI1O43156 1089 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 CPP00450 1065 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 TSPY3P0CV98 308 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 TSPY8P0CW00 308 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 PAX7P23759 505 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 CASP5P51878 434 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 MAGOHP61326 146 aaKnown RBP10.6□□□□□ -0.71
RPGR-201ENST00000318842 FAM182AQ5T1J6 154 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 CPNE8Q86YQ8 564 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 MAGOHBQ96A72 148 aaKnown RBP10.6□□□□□ -0.71
RPGR-201ENST00000318842 PNMA5Q96PV4 448 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 GPCPD1Q9NPB8 672 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 DDX20Q9UHI6 824 aaKnown RBP10.6□□□□□ -0.71
RPGR-201ENST00000318842 FBXO3Q9UK99 471 aa10.6□□□□□ -0.71
RPGR-201ENST00000318842 SFI1A8K8P3 1242 aa10.59□□□□□ -0.71
RPGR-201ENST00000318842 RBAK-RBAKDNI3L0D1 243 aa10.59□□□□□ -0.71
RPGR-201ENST00000318842 OR52Z1P0C646 297 aa10.59□□□□□ -0.71
RPGR-201ENST00000318842 ABCB4P21439 1286 aa10.59□□□□□ -0.71
RPGR-201ENST00000318842 CTNNA1P35221 906 aaKnown RBP10.59□□□□□ -0.71
RPGR-201ENST00000318842 FAM133BQ5BKY9 247 aaKnown RBP10.59□□□□□ -0.71
RPGR-201ENST00000318842 FAM83BQ5T0W9 1011 aa10.59□□□□□ -0.71
RPGR-201ENST00000318842 GBP6Q6ZN66 633 aa10.59□□□□□ -0.71
RPGR-201ENST00000318842 PRPF38AQ8NAV1 312 aaKnown RBP10.59□□□□□ -0.71
RPGR-201ENST00000318842 MGARPQ8TDB4 240 aa10.59□□□□□ -0.71
RPGR-201ENST00000318842 NOX5Q96PH1 765 aa10.59□□□□□ -0.71
RPGR-201ENST00000318842 CCDC113Q9H0I3 377 aa10.59□□□□□ -0.71
RPGR-201ENST00000318842 RBM28Q9NW13 759 aaKnown RBP10.59□□□□□ -0.71
RPGR-201ENST00000318842 MINPP1Q9UNW1 487 aa10.59□□□□□ -0.71
RPGR-201ENST00000318842 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.59□□□□□ -0.71
RPGR-201ENST00000318842 L3MBTL1Q9Y468 752 aa10.59□□□□□ -0.71
RPGR-201ENST00000318842 USP17L5A8MUK1 530 aa10.59□□□□□ -0.71
RPGR-201ENST00000318842 OPA1O60313 960 aa10.59□□□□□ -0.71
RPGR-201ENST00000318842 LRRN2O75325 713 aa10.59□□□□□ -0.71
RPGR-201ENST00000318842 IL6STP40189 918 aaPredicted RBP10.59□□□□□ -0.71
RPGR-201ENST00000318842 KCNA1Q09470 495 aa10.59□□□□□ -0.71
RPGR-201ENST00000318842 CCDC152Q4G0S7 254 aa10.59□□□□□ -0.71
RPGR-201ENST00000318842 EHBP1Q8NDI1 1231 aa10.59□□□□□ -0.71
RPGR-201ENST00000318842 CABS1Q96KC9 395 aa10.59□□□□□ -0.71
RPGR-201ENST00000318842 TMEM47Q9BQJ4 181 aa10.59□□□□□ -0.71
RPGR-201ENST00000318842 EPN3Q9H201 632 aa10.59□□□□□ -0.71
RPGR-201ENST00000318842 SRP68Q9UHB9 627 aaKnown RBP10.59□□□□□ -0.71
RPGR-201ENST00000318842 SUFUQ9UMX1 484 aa10.59□□□□□ -0.71
RPGR-201ENST00000318842 ATP8A1Q9Y2Q0 1164 aa10.59□□□□□ -0.71
RPGR-201ENST00000318842 CD2APQ9Y5K6 639 aa10.59□□□□□ -0.71
RPGR-201ENST00000318842 GOLGA6L7A0A1B0GV03 622 aa10.58□□□□□ -0.72
RPGR-201ENST00000318842 ECHS1P30084 290 aa10.58□□□□□ -0.72
RPGR-201ENST00000318842 MDH1P40925 334 aaKnown RBP10.58□□□□□ -0.72
RPGR-201ENST00000318842 ITGB3BPQ13352 177 aaPredicted RBP10.58□□□□□ -0.72
RPGR-201ENST00000318842 LRRC14Q15048 493 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms