RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 GMCL1P1Q8NEA9 526 aa15.32■□□□□ 0.04
ATG4C-201ENST00000317868 P2RX7Q99572 595 aaKnown RBP15.32■□□□□ 0.04
ATG4C-201ENST00000317868 KCNQ5Q9NR82 932 aa15.32■□□□□ 0.04
ATG4C-201ENST00000317868 EEF2P13639 858 aaKnown RBP15.32■□□□□ 0.04
ATG4C-201ENST00000317868 AP3B2Q13367 1082 aa15.32■□□□□ 0.04
ATG4C-201ENST00000317868 SHROOM1Q2M3G4 852 aaPredicted RBP15.32■□□□□ 0.04
ATG4C-201ENST00000317868 ASTE1Q2TB18 679 aaPredicted RBP15.32■□□□□ 0.04
ATG4C-201ENST00000317868 NOA1Q8NC60 698 aaKnown RBP15.32■□□□□ 0.04
ATG4C-201ENST00000317868 ETNPPLQ8TBG4 499 aa15.32■□□□□ 0.04
ATG4C-201ENST00000317868 ANO3Q9BYT9 981 aa15.32■□□□□ 0.04
ATG4C-201ENST00000317868 KANSL2Q9H9L4 492 aa15.32■□□□□ 0.04
ATG4C-201ENST00000317868 ZNHIT6Q9NWK9 470 aaKnown RBP15.32■□□□□ 0.04
ATG4C-201ENST00000317868 PCDHA12Q9UN75 941 aa15.32■□□□□ 0.04
ATG4C-201ENST00000317868 PCDHAC2Q9Y5I4 1007 aa15.32■□□□□ 0.04
ATG4C-201ENST00000317868 PLSCR1O15162 318 aa15.31■□□□□ 0.04
ATG4C-201ENST00000317868 TUBBP07437 444 aa15.31■□□□□ 0.04
ATG4C-201ENST00000317868 NCAPH2Q6IBW4 605 aa15.31■□□□□ 0.04
ATG4C-201ENST00000317868 CCDC84Q86UT8 332 aaPredicted RBP15.31■□□□□ 0.04
ATG4C-201ENST00000317868 GJA10Q969M2 543 aa15.31■□□□□ 0.04
ATG4C-201ENST00000317868 PI4KBQ9UBF8 816 aa15.31■□□□□ 0.04
ATG4C-201ENST00000317868 L1RE1Q9UN81 338 aa15.31■□□□□ 0.04
ATG4C-201ENST00000317868 CDC37Q16543 378 aaPredicted RBP15.31■□□□□ 0.04
ATG4C-201ENST00000317868 MYOCDQ8IZQ8 938 aa15.31■□□□□ 0.04
ATG4C-201ENST00000317868 TSGA10Q9BZW7 698 aa15.31■□□□□ 0.04
ATG4C-201ENST00000317868 PLEKP08567 350 aaPredicted RBP15.3■□□□□ 0.04
ATG4C-201ENST00000317868 KCNMA1Q12791 1236 aa15.3■□□□□ 0.04
ATG4C-201ENST00000317868 Q4G0T1 1027 aa15.3■□□□□ 0.04
ATG4C-201ENST00000317868 LENG9Q96B70 501 aa15.3■□□□□ 0.04
ATG4C-201ENST00000317868 GMCL1Q96IK5 515 aa15.3■□□□□ 0.04
ATG4C-201ENST00000317868 FGFBP2Q9BYJ0 223 aa15.3■□□□□ 0.04
ATG4C-201ENST00000317868 KCTD10Q9H3F6 313 aa15.3■□□□□ 0.04
ATG4C-201ENST00000317868 PITPNM2Q9BZ72 1349 aa15.3■□□□□ 0.04
ATG4C-201ENST00000317868 USP17L15C9J2P7 530 aa15.3■□□□□ 0.04
ATG4C-201ENST00000317868 USP17L13C9JLJ4 530 aa15.3■□□□□ 0.04
ATG4C-201ENST00000317868 USP17L11C9JVI0 530 aa15.3■□□□□ 0.04
ATG4C-201ENST00000317868 USP17L18D6R9N7 530 aa15.3■□□□□ 0.04
ATG4C-201ENST00000317868 USP17L22D6RA61 530 aa15.3■□□□□ 0.04
ATG4C-201ENST00000317868 USP17L17D6RBQ6 530 aa15.3■□□□□ 0.04
ATG4C-201ENST00000317868 USP17L19D6RCP7 530 aa15.3■□□□□ 0.04
ATG4C-201ENST00000317868 USP17L20D6RJB6 530 aa15.3■□□□□ 0.04
ATG4C-201ENST00000317868 MPHOSPH10O00566 681 aaKnown RBP15.3■□□□□ 0.04
ATG4C-201ENST00000317868 SLC12A3P55017 1021 aa15.3■□□□□ 0.04
ATG4C-201ENST00000317868 VSNL1P62760 191 aa15.3■□□□□ 0.04
ATG4C-201ENST00000317868 USP17L24Q0WX57 530 aa15.3■□□□□ 0.04
ATG4C-201ENST00000317868 MAPK8IP2Q13387 824 aaPredicted RBP15.3■□□□□ 0.04
ATG4C-201ENST00000317868 USP17L6PQ6QN14 398 aa15.3■□□□□ 0.04
ATG4C-201ENST00000317868 ZNF572Q7Z3I7 529 aaPredicted RBP15.3■□□□□ 0.04
ATG4C-201ENST00000317868 CEP63Q96MT8 703 aa15.3■□□□□ 0.04
ATG4C-201ENST00000317868 HDAC6Q9UBN7 1215 aa15.3■□□□□ 0.04
ATG4C-201ENST00000317868 SAR1BQ9Y6B6 198 aa15.3■□□□□ 0.04
ATG4C-201ENST00000317868 TBX3O15119 743 aa15.3■□□□□ 0.04
ATG4C-201ENST00000317868 PJA2O43164 708 aa15.3■□□□□ 0.04
ATG4C-201ENST00000317868 CERKLQ49MI3 558 aaPredicted RBP15.3■□□□□ 0.04
ATG4C-201ENST00000317868 FAM26FQ5R3K3 315 aa15.3■□□□□ 0.04
ATG4C-201ENST00000317868 MCTP2Q6DN12 878 aa15.3■□□□□ 0.04
ATG4C-201ENST00000317868 KIAA1328Q86T90 577 aa15.3■□□□□ 0.04
ATG4C-201ENST00000317868 SH2D4AQ9H788 454 aa15.3■□□□□ 0.04
ATG4C-201ENST00000317868 DBNDD1Q9H9R9 158 aa15.3■□□□□ 0.04
ATG4C-201ENST00000317868 PANK4Q9NVE7 773 aa15.3■□□□□ 0.04
ATG4C-201ENST00000317868 SERPINA10Q9UK55 444 aa15.3■□□□□ 0.04
ATG4C-201ENST00000317868 MYH11P35749 1972 aa15.29■□□□□ 0.04
ATG4C-201ENST00000317868 RBAK-RBAKDNI3L0D1 243 aa15.29■□□□□ 0.04
ATG4C-201ENST00000317868 CYP11B2P19099 503 aa15.29■□□□□ 0.04
ATG4C-201ENST00000317868 FKBP3Q00688 224 aaKnown RBP15.29■□□□□ 0.04
ATG4C-201ENST00000317868 SMC1AQ14683 1233 aaKnown RBP15.29■□□□□ 0.04
ATG4C-201ENST00000317868 SLFN13Q68D06 897 aa15.29■□□□□ 0.04
ATG4C-201ENST00000317868 TMEM179Q6ZVK1 233 aa15.29■□□□□ 0.04
ATG4C-201ENST00000317868 SLFN12Q8IYM2 578 aa15.29■□□□□ 0.04
ATG4C-201ENST00000317868 RPGRIP1Q96KN7 1286 aa15.29■□□□□ 0.04
ATG4C-201ENST00000317868 TSG101Q99816 390 aa15.29■□□□□ 0.04
ATG4C-201ENST00000317868 PCDHA1Q9Y5I3 950 aa15.29■□□□□ 0.04
ATG4C-201ENST00000317868 COL4A3BPQ9Y5P4 624 aa15.29■□□□□ 0.04
ATG4C-201ENST00000317868 ENC1O14682 589 aa15.29■□□□□ 0.04
ATG4C-201ENST00000317868 IDEP14735 1019 aa15.29■□□□□ 0.04
ATG4C-201ENST00000317868 CYP2C19P33261 490 aa15.29■□□□□ 0.04
ATG4C-201ENST00000317868 SLC1A4P43007 532 aa15.29■□□□□ 0.04
ATG4C-201ENST00000317868 HGSNATQ68CP4 663 aa15.29■□□□□ 0.04
ATG4C-201ENST00000317868 PDXDC1Q6P996 788 aa15.29■□□□□ 0.04
ATG4C-201ENST00000317868 BTNL9Q6UXG8 535 aa15.29■□□□□ 0.04
ATG4C-201ENST00000317868 SYNPO2Q9UMS6 1093 aa15.29■□□□□ 0.04
ATG4C-201ENST00000317868 DUSP10Q9Y6W6 482 aa15.29■□□□□ 0.04
ATG4C-201ENST00000317868 E9PMD0 336 aa15.28■□□□□ 0.04
ATG4C-201ENST00000317868 MED24O75448 989 aa15.28■□□□□ 0.04
ATG4C-201ENST00000317868 NOL4O94818 638 aa15.28■□□□□ 0.04
ATG4C-201ENST00000317868 PLA2G4BP0C869 781 aa15.28■□□□□ 0.04
ATG4C-201ENST00000317868 USP14P54578 494 aa15.28■□□□□ 0.04
ATG4C-201ENST00000317868 LRRC41Q15345 812 aa15.28■□□□□ 0.04
ATG4C-201ENST00000317868 ARSHQ5FYA8 562 aa15.28■□□□□ 0.04
ATG4C-201ENST00000317868 SYN2Q92777 582 aaPredicted RBP15.28■□□□□ 0.04
ATG4C-201ENST00000317868 MMS19Q96T76 1030 aa15.28■□□□□ 0.04
ATG4C-201ENST00000317868 ABCB6Q9NP58 842 aa15.28■□□□□ 0.04
ATG4C-201ENST00000317868 SSU72P8A0A1W2PR75 194 aa15.28■□□□□ 0.04
ATG4C-201ENST00000317868 POTEB3A0JP26 581 aa15.28■□□□□ 0.04
ATG4C-201ENST00000317868 LRRC53A6NM62 1247 aa15.28■□□□□ 0.04
ATG4C-201ENST00000317868 FAM196BA6NMK8 535 aa15.28■□□□□ 0.04
ATG4C-201ENST00000317868 POTECB2RU33 542 aa15.28■□□□□ 0.04
ATG4C-201ENST00000317868 MMP10P09238 476 aa15.28■□□□□ 0.04
ATG4C-201ENST00000317868 OAS2P29728 719 aaKnown RBP15.28■□□□□ 0.04
ATG4C-201ENST00000317868 CIITAP33076 1130 aa15.28■□□□□ 0.04
ATG4C-201ENST00000317868 KIF11P52732 1056 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms