RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 TXKP42681 527 aa14.58□□□□□ -0.08
CPNE1-201ENST00000317677 CALCRLQ16602 461 aa14.58□□□□□ -0.08
CPNE1-201ENST00000317677 E4F1Q66K89 784 aaPredicted RBP14.58□□□□□ -0.08
CPNE1-201ENST00000317677 CABP7Q86V35 215 aa14.58□□□□□ -0.08
CPNE1-201ENST00000317677 SMYD4Q8IYR2 804 aaPredicted RBP14.58□□□□□ -0.08
CPNE1-201ENST00000317677 PPP1R13BQ96KQ4 1090 aa14.58□□□□□ -0.08
CPNE1-201ENST00000317677 PARP14Q460N5 1801 aa14.57□□□□□ -0.08
CPNE1-201ENST00000317677 SMC2O95347 1197 aa14.57□□□□□ -0.08
CPNE1-201ENST00000317677 PLCG1P19174 1290 aa14.57□□□□□ -0.08
CPNE1-201ENST00000317677 INPP5BP32019 993 aa14.57□□□□□ -0.08
CPNE1-201ENST00000317677 UBA7P41226 1012 aa14.57□□□□□ -0.08
CPNE1-201ENST00000317677 FXR2P51116 673 aaKnown RBP eCLIP14.57□□□□□ -0.082e-6■■■□□ 18.4
CPNE1-201ENST00000317677 ETF1P62495 437 aaKnown RBP14.57□□□□□ -0.08
CPNE1-201ENST00000317677 TNFAIP1Q13829 316 aa14.57□□□□□ -0.08
CPNE1-201ENST00000317677 ARID5BQ14865 1188 aa14.57□□□□□ -0.08
CPNE1-201ENST00000317677 TRMT44Q8IYL2 757 aaKnown RBP14.57□□□□□ -0.08
CPNE1-201ENST00000317677 MLKLQ8NB16 471 aa14.57□□□□□ -0.08
CPNE1-201ENST00000317677 LRRN4CLQ8ND94 238 aa14.57□□□□□ -0.08
CPNE1-201ENST00000317677 AK8Q96MA6 479 aa14.57□□□□□ -0.08
CPNE1-201ENST00000317677 RANBP17Q9H2T7 1088 aaKnown RBP14.57□□□□□ -0.08
CPNE1-201ENST00000317677 PHIPQ8WWQ0 1821 aa14.57□□□□□ -0.08
CPNE1-201ENST00000317677 POLR2AP24928 1970 aaKnown RBP14.57□□□□□ -0.08
CPNE1-201ENST00000317677 CEP350Q5VT06 3117 aa14.57□□□□□ -0.08
CPNE1-201ENST00000317677 SSC5DA1L4H1 1573 aa14.57□□□□□ -0.08
CPNE1-201ENST00000317677 PPP1R3GB7ZBB8 358 aa14.56□□□□□ -0.08
CPNE1-201ENST00000317677 POTEIP0CG38 1075 aa14.56□□□□□ -0.08
CPNE1-201ENST00000317677 POTEJP0CG39 1038 aa14.56□□□□□ -0.08
CPNE1-201ENST00000317677 TXLNAP40222 546 aa14.56□□□□□ -0.08
CPNE1-201ENST00000317677 HIRAP54198 1017 aaPredicted RBP14.56□□□□□ -0.08
CPNE1-201ENST00000317677 PRAMEF18Q5VWM3 479 aa14.56□□□□□ -0.08
CPNE1-201ENST00000317677 RRAGBQ5VZM2 374 aa14.56□□□□□ -0.08
CPNE1-201ENST00000317677 GPATCH11Q8N954 259 aa14.56□□□□□ -0.08
CPNE1-201ENST00000317677 TBC1D5Q92609 795 aa14.56□□□□□ -0.08
CPNE1-201ENST00000317677 MBOAT7Q96N66 472 aa14.56□□□□□ -0.08
CPNE1-201ENST00000317677 PNMA5Q96PV4 448 aa14.56□□□□□ -0.08
CPNE1-201ENST00000317677 GSDMAQ96QA5 445 aa14.56□□□□□ -0.08
CPNE1-201ENST00000317677 NUDT12Q9BQG2 462 aa14.56□□□□□ -0.08
CPNE1-201ENST00000317677 PYM1Q9BRP8 204 aaKnown RBP14.56□□□□□ -0.08
CPNE1-201ENST00000317677 FUT8Q9BYC5 575 aa14.56□□□□□ -0.08
CPNE1-201ENST00000317677 ZNF341Q9BYN7 854 aa14.56□□□□□ -0.08
CPNE1-201ENST00000317677 XPO4Q9C0E2 1151 aaKnown RBP14.56□□□□□ -0.08
CPNE1-201ENST00000317677 KBTBD4Q9NVX7 518 aa14.56□□□□□ -0.08
CPNE1-201ENST00000317677 FANCLQ9NW38 375 aa14.56□□□□□ -0.08
CPNE1-201ENST00000317677 DDX25Q9UHL0 483 aaKnown RBP14.56□□□□□ -0.08
CPNE1-201ENST00000317677 FZD1Q9UP38 647 aa14.56□□□□□ -0.08
CPNE1-201ENST00000317677 POTEMA6NI47 508 aa14.56□□□□□ -0.08
CPNE1-201ENST00000317677 PLA2G6O60733 806 aa14.56□□□□□ -0.08
CPNE1-201ENST00000317677 LMAN1P49257 510 aa14.56□□□□□ -0.08
CPNE1-201ENST00000317677 GRB10Q13322 594 aa14.56□□□□□ -0.08
CPNE1-201ENST00000317677 ANGEL2Q5VTE6 544 aaKnown RBP14.56□□□□□ -0.08
CPNE1-201ENST00000317677 EFCAB13Q8IY85 973 aa14.56□□□□□ -0.08
CPNE1-201ENST00000317677 ARFGAP3Q9NP61 516 aa14.56□□□□□ -0.08
CPNE1-201ENST00000317677 GPRC5DQ9NZD1 345 aa14.56□□□□□ -0.08
CPNE1-201ENST00000317677 IFNKQ9P0W0 207 aa14.56□□□□□ -0.08
CPNE1-201ENST00000317677 MAP2K7O14733 419 aa14.55□□□□□ -0.08
CPNE1-201ENST00000317677 KLRC4O43908 158 aa14.55□□□□□ -0.08
CPNE1-201ENST00000317677 FANCCQ00597 558 aa14.55□□□□□ -0.08
CPNE1-201ENST00000317677 AP3B2Q13367 1082 aa14.55□□□□□ -0.08
CPNE1-201ENST00000317677 CCDC174Q6PII3 467 aa14.55□□□□□ -0.08
CPNE1-201ENST00000317677 USP50Q70EL3 339 aaPredicted RBP14.55□□□□□ -0.08
CPNE1-201ENST00000317677 DNAJC5GQ8N7S2 189 aa14.55□□□□□ -0.08
CPNE1-201ENST00000317677 CCDC150Q8NCX0 1101 aa14.55□□□□□ -0.08
CPNE1-201ENST00000317677 ENOX1Q8TC92 643 aaKnown RBP14.55□□□□□ -0.08
CPNE1-201ENST00000317677 KIFC2Q96AC6 838 aa14.55□□□□□ -0.08
CPNE1-201ENST00000317677 UIMC1Q96RL1 719 aa14.55□□□□□ -0.08
CPNE1-201ENST00000317677 TACO1Q9BSH4 297 aaKnown RBP14.55□□□□□ -0.08
CPNE1-201ENST00000317677 GLT8D2Q9H1C3 349 aa14.55□□□□□ -0.08
CPNE1-201ENST00000317677 DNAI1Q9UI46 699 aa14.55□□□□□ -0.08
CPNE1-201ENST00000317677 CYP3A7-CYP3A51PA0A087WV96 503 aa14.54□□□□□ -0.08
CPNE1-201ENST00000317677 ZNF18P17022 549 aa14.54□□□□□ -0.08
CPNE1-201ENST00000317677 CYP3A7P24462 503 aa14.54□□□□□ -0.08
CPNE1-201ENST00000317677 HOXA13P31271 388 aaPredicted RBP14.54□□□□□ -0.08
CPNE1-201ENST00000317677 EPS15P42566 896 aa14.54□□□□□ -0.08
CPNE1-201ENST00000317677 KLRG1Q96E93 195 aa14.54□□□□□ -0.08
CPNE1-201ENST00000317677 SH2D4AQ9H788 454 aa14.54□□□□□ -0.08
CPNE1-201ENST00000317677 BLOC1S4Q9NUP1 217 aa14.54□□□□□ -0.08
CPNE1-201ENST00000317677 CTNND1O60716 968 aaKnown RBP14.54□□□□□ -0.08
CPNE1-201ENST00000317677 RPN1P04843 607 aaKnown RBP14.54□□□□□ -0.08
CPNE1-201ENST00000317677 GCFC2P16383 781 aaKnown RBP14.54□□□□□ -0.08
CPNE1-201ENST00000317677 USP11P51784 963 aa14.54□□□□□ -0.08
CPNE1-201ENST00000317677 HTRA3P83110 453 aa14.54□□□□□ -0.08
CPNE1-201ENST00000317677 ARHGAP4P98171 946 aa14.54□□□□□ -0.08
CPNE1-201ENST00000317677 ECM1Q16610 540 aa14.54□□□□□ -0.08
CPNE1-201ENST00000317677 LENG9Q96B70 501 aa14.54□□□□□ -0.08
CPNE1-201ENST00000317677 CCDC34Q96HJ3 373 aa14.54□□□□□ -0.08
CPNE1-201ENST00000317677 KCNMB3Q9NPA1 279 aa14.54□□□□□ -0.08
CPNE1-201ENST00000317677 ADARB2Q9NS39 739 aaKnown RBP14.54□□□□□ -0.08
CPNE1-201ENST00000317677 ZNF536O15090 1300 aa14.54□□□□□ -0.08
CPNE1-201ENST00000317677 RLFQ13129 1914 aa14.53□□□□□ -0.08
CPNE1-201ENST00000317677 H7C1D1 291 aa14.53□□□□□ -0.08
CPNE1-201ENST00000317677 SEC31AO94979 1220 aaKnown RBP14.53□□□□□ -0.08
CPNE1-201ENST00000317677 SREBF1P36956 1147 aa14.53□□□□□ -0.08
CPNE1-201ENST00000317677 HSP90AA4PQ58FG1 418 aa14.53□□□□□ -0.08
CPNE1-201ENST00000317677 KCNK18Q7Z418 384 aa14.53□□□□□ -0.08
CPNE1-201ENST00000317677 CHURC1Q8WUH1 139 aa14.53□□□□□ -0.08
CPNE1-201ENST00000317677 FAM107BQ9H098 131 aa14.53□□□□□ -0.08
CPNE1-201ENST00000317677 INTS13Q9NVM9 706 aa14.53□□□□□ -0.08
CPNE1-201ENST00000317677 LRWD1Q9UFC0 647 aa14.53□□□□□ -0.08
CPNE1-201ENST00000317677 ZNF112Q9UJU3 913 aa14.53□□□□□ -0.08
CPNE1-201ENST00000317677 FEM1BQ9UK73 627 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms