RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 SMG5Q9UPR3 1016 aaKnown RBP9.57□□□□□ -0.88
COL6A5-202ENST00000312481 KRT3P12035 628 aa9.57□□□□□ -0.88
COL6A5-202ENST00000312481 PTK2Q05397 1052 aa9.57□□□□□ -0.88
COL6A5-202ENST00000312481 FAM26FQ5R3K3 315 aa9.57□□□□□ -0.88
COL6A5-202ENST00000312481 PTPREP23469 700 aa9.57□□□□□ -0.88
COL6A5-202ENST00000312481 RAB20Q9NX57 234 aa9.57□□□□□ -0.88
COL6A5-202ENST00000312481 CPDO75976 1380 aa9.56□□□□□ -0.88
COL6A5-202ENST00000312481 POTEFA5A3E0 1075 aa9.56□□□□□ -0.88
COL6A5-202ENST00000312481 FGAP02671 866 aa9.56□□□□□ -0.88
COL6A5-202ENST00000312481 POTEIP0CG38 1075 aa9.56□□□□□ -0.88
COL6A5-202ENST00000312481 NSFP46459 744 aaKnown RBP9.56□□□□□ -0.88
COL6A5-202ENST00000312481 PPP2R5CQ13362 524 aa9.56□□□□□ -0.88
COL6A5-202ENST00000312481 KARSQ15046 597 aaKnown RBP9.56□□□□□ -0.88
COL6A5-202ENST00000312481 POTEEQ6S8J3 1075 aa9.56□□□□□ -0.88
COL6A5-202ENST00000312481 CAPN7Q9Y6W3 813 aa9.56□□□□□ -0.88
COL6A5-202ENST00000312481 DCAF15Q66K64 600 aa9.56□□□□□ -0.88
COL6A5-202ENST00000312481 LAMA4Q16363 1823 aa9.56□□□□□ -0.88
COL6A5-202ENST00000312481 IQANK1A0A1B0GTG1 560 aa9.56□□□□□ -0.88
COL6A5-202ENST00000312481 USPL1Q5W0Q7 1092 aa9.56□□□□□ -0.88
COL6A5-202ENST00000312481 GUF1Q8N442 669 aaKnown RBP9.56□□□□□ -0.88
COL6A5-202ENST00000312481 KCNB2Q92953 911 aa9.56□□□□□ -0.88
COL6A5-202ENST00000312481 UBN1Q9NPG3 1134 aa9.56□□□□□ -0.88
COL6A5-202ENST00000312481 GINM1Q9NU53 330 aa9.56□□□□□ -0.88
COL6A5-202ENST00000312481 GGA1Q9UJY5 639 aa9.56□□□□□ -0.88
COL6A5-202ENST00000312481 MYH14Q7Z406 1995 aaKnown RBP9.56□□□□□ -0.88
COL6A5-202ENST00000312481 SH2B2O14492 632 aaPredicted RBP9.56□□□□□ -0.88
COL6A5-202ENST00000312481 SLC16A3O15427 465 aaKnown RBP9.56□□□□□ -0.88
COL6A5-202ENST00000312481 DCAF17Q5H9S7 520 aaPredicted RBP9.56□□□□□ -0.88
COL6A5-202ENST00000312481 RBM43Q6ZSC3 357 aaKnown RBP9.56□□□□□ -0.88
COL6A5-202ENST00000312481 CCDC13Q8IYE1 715 aa9.56□□□□□ -0.88
COL6A5-202ENST00000312481 CNBD1Q8NA66 436 aa9.56□□□□□ -0.88
COL6A5-202ENST00000312481 RSAD2Q8WXG1 361 aa9.56□□□□□ -0.88
COL6A5-202ENST00000312481 CEP104O60308 925 aa9.56□□□□□ -0.88
COL6A5-202ENST00000312481 HOXC6P09630 235 aa9.56□□□□□ -0.88
COL6A5-202ENST00000312481 TBXAS1P24557 533 aaPredicted RBP9.56□□□□□ -0.88
COL6A5-202ENST00000312481 GNGT1P63211 74 aa9.56□□□□□ -0.88
COL6A5-202ENST00000312481 KIF23Q02241 960 aaPredicted RBP9.56□□□□□ -0.88
COL6A5-202ENST00000312481 PABPC4Q13310 644 aaKnown RBP eCLIP9.56□□□□□ -0.88
COL6A5-202ENST00000312481 PDIA5Q14554 519 aa9.56□□□□□ -0.88
COL6A5-202ENST00000312481 RASGRP2Q7LDG7 609 aa9.56□□□□□ -0.88
COL6A5-202ENST00000312481 CCPG1Q9ULG6 757 aa9.56□□□□□ -0.88
COL6A5-202ENST00000312481 C6orf229H3BNL8 230 aa9.56□□□□□ -0.88
COL6A5-202ENST00000312481 SNUPNO95149 360 aaKnown RBP9.56□□□□□ -0.88
COL6A5-202ENST00000312481 AFPP02771 609 aaKnown RBP9.56□□□□□ -0.88
COL6A5-202ENST00000312481 HPDP32754 393 aaPredicted RBP9.56□□□□□ -0.88
COL6A5-202ENST00000312481 FBXO31Q5XUX0 539 aaPredicted RBP9.56□□□□□ -0.88
COL6A5-202ENST00000312481 UNC13DQ70J99 1090 aa9.56□□□□□ -0.88
COL6A5-202ENST00000312481 RRAGAQ7L523 313 aa9.56□□□□□ -0.88
COL6A5-202ENST00000312481 NLRP7Q8WX94 980 aa9.56□□□□□ -0.88
COL6A5-202ENST00000312481 DHX38Q92620 1227 aaKnown RBP9.56□□□□□ -0.88
COL6A5-202ENST00000312481 UBR1Q8IWV7 1749 aa9.56□□□□□ -0.88
COL6A5-202ENST00000312481 ATP2B4P23634 1241 aa9.56□□□□□ -0.88
COL6A5-202ENST00000312481 AGBL2Q5U5Z8 902 aa9.56□□□□□ -0.88
COL6A5-202ENST00000312481 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.56□□□□□ -0.88
COL6A5-202ENST00000312481 DISC1Q9NRI5 854 aa9.56□□□□□ -0.88
COL6A5-202ENST00000312481 FANCLQ9NW38 375 aa9.56□□□□□ -0.88
COL6A5-202ENST00000312481 MRFAP1Q9Y605 127 aa9.56□□□□□ -0.88
COL6A5-202ENST00000312481 P4HA2O15460 535 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 CALB1P05937 261 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 GSTA2P09210 222 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 ADRA2BP18089 450 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 FAM178BQ8IXR5 827 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 COG1Q8WTW3 980 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 KIFC2Q96AC6 838 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 CCSER1Q9C0I3 900 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 AS3MTQ9HBK9 375 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 ADAM21Q9UKJ8 722 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 ORC6Q9Y5N6 252 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 UTYO14607 1347 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 LDHAP00338 332 aaKnown RBP9.55□□□□□ -0.88
COL6A5-202ENST00000312481 LETM2Q2VYF4 491 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 TCP11X2Q5H9J9 407 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 FIGNQ5HY92 759 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 TRIM4Q9C037 500 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 WNT8AQ9H1J5 351 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 CYP26B1Q9NR63 512 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 MYO3BQ8WXR4 1341 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 TTLL1O95922 423 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 SLC1A1P43005 524 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 PTGDRQ13258 359 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 BYSLQ13895 437 aaKnown RBP9.55□□□□□ -0.88
COL6A5-202ENST00000312481 RASA3Q14644 834 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 ARHGEF2Q92974 986 aaKnown RBP9.55□□□□□ -0.88
COL6A5-202ENST00000312481 CNOT6LQ96LI5 555 aaKnown RBP9.55□□□□□ -0.88
COL6A5-202ENST00000312481 AMNQ9BXJ7 453 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 L2HGDHQ9H9P8 463 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.55□□□□□ -0.88
COL6A5-202ENST00000312481 EXOC3O60645 756 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 ADD2P35612 726 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 PI4K2BQ8TCG2 481 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 FAM20AQ96MK3 541 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 B4E1Z4 1266 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 ATP5J2-PTCD1G3V325 749 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 GAS7O60861 476 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 TADA3O75528 432 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 CLCN6P51797 869 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 FSCBQ5H9T9 825 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 TRMT10CQ7L0Y3 403 aaKnown RBP9.55□□□□□ -0.88
COL6A5-202ENST00000312481 TTC1Q99614 292 aa9.55□□□□□ -0.88
COL6A5-202ENST00000312481 VPS16Q9H269 839 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms