RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 USP17L15C9J2P7 530 aa16.87■□□□□ 0.29
SPIRE1-201ENST00000309836 USP17L13C9JLJ4 530 aa16.87■□□□□ 0.29
SPIRE1-201ENST00000309836 USP17L11C9JVI0 530 aa16.87■□□□□ 0.29
SPIRE1-201ENST00000309836 USP17L18D6R9N7 530 aa16.87■□□□□ 0.29
SPIRE1-201ENST00000309836 USP17L22D6RA61 530 aa16.87■□□□□ 0.29
SPIRE1-201ENST00000309836 USP17L17D6RBQ6 530 aa16.87■□□□□ 0.29
SPIRE1-201ENST00000309836 USP17L19D6RCP7 530 aa16.87■□□□□ 0.29
SPIRE1-201ENST00000309836 USP17L20D6RJB6 530 aa16.87■□□□□ 0.29
SPIRE1-201ENST00000309836 N4BP1O75113 896 aaKnown RBP16.87■□□□□ 0.29
SPIRE1-201ENST00000309836 ERCC3P19447 782 aa16.87■□□□□ 0.29
SPIRE1-201ENST00000309836 USP17L24Q0WX57 530 aa16.87■□□□□ 0.29
SPIRE1-201ENST00000309836 KCNMA1Q12791 1236 aa16.87■□□□□ 0.29
SPIRE1-201ENST00000309836 QRICH1Q2TAL8 776 aa16.87■□□□□ 0.29
SPIRE1-201ENST00000309836 FAM26FQ5R3K3 315 aa16.87■□□□□ 0.29
SPIRE1-201ENST00000309836 USP17L6PQ6QN14 398 aa16.87■□□□□ 0.29
SPIRE1-201ENST00000309836 RRAGAQ7L523 313 aa16.87■□□□□ 0.29
SPIRE1-201ENST00000309836 CCDC84Q86UT8 332 aaPredicted RBP16.87■□□□□ 0.29
SPIRE1-201ENST00000309836 PROM2Q8N271 834 aa16.87■□□□□ 0.29
SPIRE1-201ENST00000309836 NEK11Q8NG66 645 aa16.87■□□□□ 0.29
SPIRE1-201ENST00000309836 EHD4Q9H223 541 aa16.87■□□□□ 0.29
SPIRE1-201ENST00000309836 PCDHA2Q9Y5H9 948 aa16.87■□□□□ 0.29
SPIRE1-201ENST00000309836 CAPN6Q9Y6Q1 641 aa16.87■□□□□ 0.29
SPIRE1-201ENST00000309836 NPHP3-ACAD11A0A0J9YXS1 232 aa16.86■□□□□ 0.29
SPIRE1-201ENST00000309836 E9PMD0 336 aa16.86■□□□□ 0.29
SPIRE1-201ENST00000309836 TEKT1Q969V4 418 aa16.86■□□□□ 0.29
SPIRE1-201ENST00000309836 ZBTB9Q96C00 473 aa16.86■□□□□ 0.29
SPIRE1-201ENST00000309836 IFIH1Q9BYX4 1025 aaKnown RBP16.86■□□□□ 0.29
SPIRE1-201ENST00000309836 PCDHA12Q9UN75 941 aa16.86■□□□□ 0.29
SPIRE1-201ENST00000309836 PCDHAC2Q9Y5I4 1007 aa16.86■□□□□ 0.29
SPIRE1-201ENST00000309836 KDM3AQ9Y4C1 1321 aa16.86■□□□□ 0.29
SPIRE1-201ENST00000309836 FAM196BA6NMK8 535 aa16.86■□□□□ 0.29
SPIRE1-201ENST00000309836 LRRIQ3A6PVS8 624 aaPredicted RBP16.86■□□□□ 0.29
SPIRE1-201ENST00000309836 MARCH6O60337 910 aa16.86■□□□□ 0.29
SPIRE1-201ENST00000309836 SSBP05455 408 aaKnown RBP eCLIP16.86■□□□□ 0.29
SPIRE1-201ENST00000309836 CRKP46108 304 aa16.86■□□□□ 0.29
SPIRE1-201ENST00000309836 RPGRIP1Q96KN7 1286 aa16.86■□□□□ 0.29
SPIRE1-201ENST00000309836 MBOAT7Q96N66 472 aa16.86■□□□□ 0.29
SPIRE1-201ENST00000309836 ANO3Q9BYT9 981 aa16.86■□□□□ 0.29
SPIRE1-201ENST00000309836 KCNMB3Q9NPA1 279 aa16.86■□□□□ 0.29
SPIRE1-201ENST00000309836 TBC1D7Q9P0N9 293 aa16.86■□□□□ 0.29
SPIRE1-201ENST00000309836 COL4A3BPQ9Y5P4 624 aa16.86■□□□□ 0.29
SPIRE1-201ENST00000309836 POTEB3A0JP26 581 aa16.85■□□□□ 0.29
SPIRE1-201ENST00000309836 TARSL2A2RTX5 802 aaKnown RBP16.85■□□□□ 0.29
SPIRE1-201ENST00000309836 CCDC66A2RUB6 948 aa16.85■□□□□ 0.29
SPIRE1-201ENST00000309836 POTECB2RU33 542 aa16.85■□□□□ 0.29
SPIRE1-201ENST00000309836 EIF3JO75822 258 aaKnown RBP16.85■□□□□ 0.29
SPIRE1-201ENST00000309836 MOCS3O95396 460 aa16.85■□□□□ 0.29
SPIRE1-201ENST00000309836 PLA2G4BP0C869 781 aa16.85■□□□□ 0.29
SPIRE1-201ENST00000309836 NPR1P16066 1061 aa16.85■□□□□ 0.29
SPIRE1-201ENST00000309836 ASTE1Q2TB18 679 aaPredicted RBP16.85■□□□□ 0.29
SPIRE1-201ENST00000309836 POTEBQ6S5H4 581 aa16.85■□□□□ 0.29
SPIRE1-201ENST00000309836 GPBP1Q86WP2 473 aa16.85■□□□□ 0.29
SPIRE1-201ENST00000309836 CAGE1Q8TC20 777 aa16.85■□□□□ 0.29
SPIRE1-201ENST00000309836 CCDC17Q96LX7 622 aa16.85■□□□□ 0.29
SPIRE1-201ENST00000309836 NAP1L4Q99733 375 aaKnown RBP16.85■□□□□ 0.29
SPIRE1-201ENST00000309836 EDEM3Q9BZQ6 932 aa16.85■□□□□ 0.29
SPIRE1-201ENST00000309836 KCNQ5Q9NR82 932 aa16.85■□□□□ 0.29
SPIRE1-201ENST00000309836 SNX12Q9UMY4 172 aa16.85■□□□□ 0.29
SPIRE1-201ENST00000309836 KIAA1024Q9UPX6 916 aa16.85■□□□□ 0.29
SPIRE1-201ENST00000309836 CYP3A7-CYP3A51PA0A087WV96 503 aa16.84■□□□□ 0.29
SPIRE1-201ENST00000309836 USO1O60763 962 aaKnown RBP16.84■□□□□ 0.29
SPIRE1-201ENST00000309836 TACC1O75410 805 aa16.84■□□□□ 0.29
SPIRE1-201ENST00000309836 NOL4O94818 638 aa16.84■□□□□ 0.29
SPIRE1-201ENST00000309836 EEF2P13639 858 aaKnown RBP16.84■□□□□ 0.29
SPIRE1-201ENST00000309836 CYP3A7P24462 503 aa16.84■□□□□ 0.29
SPIRE1-201ENST00000309836 STAT3P40763 770 aa16.84■□□□□ 0.29
SPIRE1-201ENST00000309836 CACNB3P54284 484 aa16.84■□□□□ 0.29
SPIRE1-201ENST00000309836 FKBP3Q00688 224 aaKnown RBP16.84■□□□□ 0.29
SPIRE1-201ENST00000309836 C2orf54Q08AI8 447 aa16.84■□□□□ 0.29
SPIRE1-201ENST00000309836 HGSNATQ68CP4 663 aa16.84■□□□□ 0.29
SPIRE1-201ENST00000309836 DCAF4Q8WV16 495 aa16.84■□□□□ 0.29
SPIRE1-201ENST00000309836 P2RX7Q99572 595 aaKnown RBP16.84■□□□□ 0.29
SPIRE1-201ENST00000309836 NT5C3AQ9H0P0 336 aa16.84■□□□□ 0.29
SPIRE1-201ENST00000309836 ADAM21Q9UKJ8 722 aa16.84■□□□□ 0.29
SPIRE1-201ENST00000309836 TRAF5O00463 557 aa16.84■□□□□ 0.29
SPIRE1-201ENST00000309836 PJA2O43164 708 aa16.84■□□□□ 0.29
SPIRE1-201ENST00000309836 AKR1B10O60218 316 aa16.84■□□□□ 0.29
SPIRE1-201ENST00000309836 MED24O75448 989 aa16.84■□□□□ 0.29
SPIRE1-201ENST00000309836 CACNB1Q02641 598 aaPredicted RBP16.84■□□□□ 0.29
SPIRE1-201ENST00000309836 GPS2Q13227 327 aa16.84■□□□□ 0.29
SPIRE1-201ENST00000309836 MAPK8IP2Q13387 824 aaPredicted RBP16.84■□□□□ 0.29
SPIRE1-201ENST00000309836 CDC37Q16543 378 aaPredicted RBP16.84■□□□□ 0.29
SPIRE1-201ENST00000309836 CCDC40Q4G0X9 1142 aa16.84■□□□□ 0.29
SPIRE1-201ENST00000309836 SLFN13Q68D06 897 aa16.84■□□□□ 0.29
SPIRE1-201ENST00000309836 CREG2Q8IUH2 290 aa16.84■□□□□ 0.29
SPIRE1-201ENST00000309836 TRIM58Q8NG06 486 aa16.84■□□□□ 0.29
SPIRE1-201ENST00000309836 MKL1Q969V6 931 aa16.84■□□□□ 0.29
SPIRE1-201ENST00000309836 EXOC4Q96A65 974 aa16.84■□□□□ 0.29
SPIRE1-201ENST00000309836 CEP63Q96MT8 703 aa16.84■□□□□ 0.29
SPIRE1-201ENST00000309836 TANGO6Q9C0B7 1094 aa16.84■□□□□ 0.29
SPIRE1-201ENST00000309836 DEF6Q9H4E7 631 aa16.84■□□□□ 0.29
SPIRE1-201ENST00000309836 JADE2Q9NQC1 790 aa16.84■□□□□ 0.29
SPIRE1-201ENST00000309836 JRKLQ9Y4A0 524 aa16.84■□□□□ 0.29
SPIRE1-201ENST00000309836 PCDHA1Q9Y5I3 950 aa16.84■□□□□ 0.29
SPIRE1-201ENST00000309836 DDTLA6NHG4 134 aaPredicted RBP16.83■□□□□ 0.28
SPIRE1-201ENST00000309836 SLC26A4O43511 780 aa16.83■□□□□ 0.28
SPIRE1-201ENST00000309836 TRIM37O94972 964 aa16.83■□□□□ 0.28
SPIRE1-201ENST00000309836 CYP11B2P19099 503 aa16.83■□□□□ 0.28
SPIRE1-201ENST00000309836 TAF3Q5VWG9 929 aa16.83■□□□□ 0.28
SPIRE1-201ENST00000309836 SH3BP5LQ7L8J4 393 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms