RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 SERTAD1Q9UHV2 236 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 PCDHA12Q9UN75 941 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 TMX2Q9Y320 296 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 ATP6V1DQ9Y5K8 247 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 POTEB3A0JP26 581 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 USO1O60763 962 aaKnown RBP5.54□□□□□ -1.52
CAST-201ENST00000309190 GAS7O60861 476 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 SYKP43405 635 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 VEGFBP49765 207 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 ZNF280AP59817 542 aaPredicted RBP5.54□□□□□ -1.52
CAST-201ENST00000309190 POTEBQ6S5H4 581 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 DPH6Q7L8W6 267 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 FILIP1Q7Z7B0 1213 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 CD99L2Q8TCZ2 262 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 MOV10L1Q9BXT6 1211 aaKnown RBP5.54□□□□□ -1.52
CAST-201ENST00000309190 ANO3Q9BYT9 981 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 GOLPH3LQ9H4A5 285 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 CNTNAP5Q8WYK1 1306 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 CCDC169A6NNP5 214 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 USP27XA6NNY8 438 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 VWA5AO00534 786 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 TOMM70O94826 608 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 GNA11P29992 359 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 GNAQP50148 359 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 MTERF2Q49AM1 385 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 DTHD1Q6ZMT9 781 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.54□□□□□ -1.52
CAST-201ENST00000309190 ZNF396Q96N95 335 aaPredicted RBP5.54□□□□□ -1.52
CAST-201ENST00000309190 CLSTN2Q9H4D0 955 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 SH2D4AQ9H788 454 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 LRWD1Q9UFC0 647 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 CACNA1GO43497 2377 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 PNMA6FA0A0J9YX94 578 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 TMEM88BA6NKF7 163 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 KIF3CO14782 793 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 NEMFO60524 1076 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 MMP1P03956 469 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 ZNF286BP0CG31 522 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 SRGAP2CP0DJJ0 459 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 ADCYAP1R1P41586 468 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 ASIC1P78348 528 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 ARHGAP4P98171 946 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 NFX1Q12986 1120 aaKnown RBP5.54□□□□□ -1.52
CAST-201ENST00000309190 FAM83AQ86UY5 434 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 LUZP1Q86V48 1076 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 LRRC71Q8N4P6 559 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 KIF18AQ8NI77 898 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 SYMPKQ92797 1274 aaKnown RBP5.54□□□□□ -1.52
CAST-201ENST00000309190 GPRC5CQ9NQ84 441 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 A1CFQ9NQ94 594 aaKnown RBP5.54□□□□□ -1.52
CAST-201ENST00000309190 TRPC6Q9Y210 931 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 SPDYE16A6NNV3 312 aaPredicted RBP5.53□□□□□ -1.52
CAST-201ENST00000309190 FGFR4P22455 802 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 STAT6P42226 847 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 NUMBP49757 651 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 GOLGA8FQ08AF8 430 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 GOLGA8DPQ0D2H9 430 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 GRM4Q14833 912 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 GPATCH4Q5T3I0 446 aaKnown RBP5.53□□□□□ -1.52
CAST-201ENST00000309190 TCERG1LQ5VWI1 586 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 SWSAP1Q6NVH7 229 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 RAET1EQ8TD07 263 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 CACTINQ8WUQ7 758 aaKnown RBP5.53□□□□□ -1.52
CAST-201ENST00000309190 WASF1Q92558 559 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 MRFAP1L1Q96HT8 127 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 ZNF577Q9BSK1 485 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 SLC39A2Q9NP94 309 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 TCP11L1Q9NUJ3 509 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 NRBP1Q9UHY1 535 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 NOD1Q9Y239 953 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 SUGT1Q9Y2Z0 365 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 DOCK3Q8IZD9 2030 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 RIF1Q5UIP0 2472 aaKnown RBP5.53□□□□□ -1.52
CAST-201ENST00000309190 PALM3A6NDB9 673 aaPredicted RBP5.53□□□□□ -1.52
CAST-201ENST00000309190 FAM86B1E9PN63 330 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 FAM86B2P0C5J1 330 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 ADORA2AP29274 412 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 FLT3LGP49771 235 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 ZNF75DP51815 510 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 PSMC6P62333 389 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 HDLBPQ00341 1268 aaKnown RBP5.53□□□□□ -1.52
CAST-201ENST00000309190 SPAG1Q07617 926 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 C15orf52Q6ZUT6 534 aaKnown RBP5.53□□□□□ -1.52
CAST-201ENST00000309190 FAM200AQ8TCP9 573 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 TRIM44Q96DX7 344 aaPredicted RBP5.53□□□□□ -1.52
CAST-201ENST00000309190 CALR3Q96L12 384 aaKnown RBP5.53□□□□□ -1.52
CAST-201ENST00000309190 CBX8Q9HC52 389 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 HOXC10Q9NYD6 342 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 CFAP45Q9UL16 551 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 FHOD1Q9Y613 1164 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 MYH7BA7E2Y1 1941 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 TPRP12270 2363 aaKnown RBP5.53□□□□□ -1.52
CAST-201ENST00000309190 STXBP3O00186 592 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 ABCB7O75027 752 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 ITGBL1O95965 494 aaPredicted RBP5.53□□□□□ -1.52
CAST-201ENST00000309190 MSNP26038 577 aaKnown RBP5.53□□□□□ -1.52
CAST-201ENST00000309190 TOB1P50616 345 aaPredicted RBP5.53□□□□□ -1.52
CAST-201ENST00000309190 ARID5AQ03989 594 aa5.53□□□□□ -1.52
CAST-201ENST00000309190 PFKFB3Q16875 520 aaPredicted RBP5.53□□□□□ -1.52
CAST-201ENST00000309190 KMT5BQ4FZB7 885 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms