RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 TRAPPC11Q7Z392 1133 aa11.47□□□□□ -0.57
APOBEC3F-201ENST00000308521 SPZ1Q9BXG8 430 aa11.47□□□□□ -0.57
APOBEC3F-201ENST00000308521 FHDC1Q9C0D6 1143 aaPredicted RBP11.47□□□□□ -0.57
APOBEC3F-201ENST00000308521 KANSL2Q9H9L4 492 aa11.47□□□□□ -0.57
APOBEC3F-201ENST00000308521 TARSL2A2RTX5 802 aaKnown RBP11.47□□□□□ -0.57
APOBEC3F-201ENST00000308521 LRRIQ3A6PVS8 624 aaPredicted RBP11.47□□□□□ -0.57
APOBEC3F-201ENST00000308521 N4BP3O15049 544 aa11.47□□□□□ -0.57
APOBEC3F-201ENST00000308521 TAL1P17542 331 aaPredicted RBP11.47□□□□□ -0.57
APOBEC3F-201ENST00000308521 SLC1A4P43007 532 aa11.47□□□□□ -0.57
APOBEC3F-201ENST00000308521 INF2Q27J81 1249 aa11.47□□□□□ -0.57
APOBEC3F-201ENST00000308521 MAP9Q49MG5 647 aa11.47□□□□□ -0.57
APOBEC3F-201ENST00000308521 TTC38Q5R3I4 469 aa11.47□□□□□ -0.57
APOBEC3F-201ENST00000308521 EP400NLQ6ZTU2 488 aa11.47□□□□□ -0.57
APOBEC3F-201ENST00000308521 NOA1Q8NC60 698 aaKnown RBP11.47□□□□□ -0.57
APOBEC3F-201ENST00000308521 CCDC102AQ96A19 550 aa11.47□□□□□ -0.57
APOBEC3F-201ENST00000308521 RPGRIP1Q96KN7 1286 aa11.47□□□□□ -0.57
APOBEC3F-201ENST00000308521 VPS33BQ9H267 617 aa11.47□□□□□ -0.57
APOBEC3F-201ENST00000308521 JMJD4Q9H9V9 463 aa11.47□□□□□ -0.57
APOBEC3F-201ENST00000308521 BIN2Q9UBW5 565 aaPredicted RBP11.47□□□□□ -0.57
APOBEC3F-201ENST00000308521 CNOT7Q9UIV1 285 aaKnown RBP11.47□□□□□ -0.57
APOBEC3F-201ENST00000308521 PCDHA6Q9UN73 950 aa11.47□□□□□ -0.57
APOBEC3F-201ENST00000308521 PCDHA4Q9UN74 947 aa11.47□□□□□ -0.57
APOBEC3F-201ENST00000308521 FZD1Q9UP38 647 aa11.47□□□□□ -0.57
APOBEC3F-201ENST00000308521 PCDHA8Q9Y5H6 950 aa11.47□□□□□ -0.57
APOBEC3F-201ENST00000308521 F5H6K3 240 aa11.46□□□□□ -0.57
APOBEC3F-201ENST00000308521 SNHG28P0DPA3 235 aa11.46□□□□□ -0.57
APOBEC3F-201ENST00000308521 SSR1P43307 286 aaKnown RBP11.46□□□□□ -0.57
APOBEC3F-201ENST00000308521 KLRC3Q07444 240 aa11.46□□□□□ -0.57
APOBEC3F-201ENST00000308521 PTGDRQ13258 359 aa11.46□□□□□ -0.57
APOBEC3F-201ENST00000308521 RASA3Q14644 834 aa11.46□□□□□ -0.57
APOBEC3F-201ENST00000308521 TNIP1Q15025 636 aa11.46□□□□□ -0.57
APOBEC3F-201ENST00000308521 SLFN13Q68D06 897 aa11.46□□□□□ -0.57
APOBEC3F-201ENST00000308521 LRRC31Q6UY01 552 aa11.46□□□□□ -0.57
APOBEC3F-201ENST00000308521 ACER1Q8TDN7 264 aa11.46□□□□□ -0.57
APOBEC3F-201ENST00000308521 LZTS2Q9BRK4 669 aa11.46□□□□□ -0.57
APOBEC3F-201ENST00000308521 HAUS4Q9H6D7 363 aa11.46□□□□□ -0.57
APOBEC3F-201ENST00000308521 RIOX1Q9H6W3 641 aa11.46□□□□□ -0.57
APOBEC3F-201ENST00000308521 CTNND2Q9UQB3 1225 aa11.46□□□□□ -0.57
APOBEC3F-201ENST00000308521 ZNF541Q9H0D2 1346 aa11.46□□□□□ -0.57
APOBEC3F-201ENST00000308521 PPP1R11O60927 126 aaPredicted RBP11.46□□□□□ -0.58
APOBEC3F-201ENST00000308521 ABL1P00519 1130 aa11.46□□□□□ -0.58
APOBEC3F-201ENST00000308521 IKQ13123 557 aaPredicted RBP11.46□□□□□ -0.58
APOBEC3F-201ENST00000308521 ASPRV1Q53RT3 343 aa11.46□□□□□ -0.58
APOBEC3F-201ENST00000308521 TMEM179Q6ZVK1 233 aa11.46□□□□□ -0.58
APOBEC3F-201ENST00000308521 TMEM260Q9NX78 707 aa11.46□□□□□ -0.58
APOBEC3F-201ENST00000308521 EPN1Q9Y6I3 576 aaPredicted RBP11.46□□□□□ -0.58
APOBEC3F-201ENST00000308521 FER1L6Q2WGJ9 1857 aa11.46□□□□□ -0.58
APOBEC3F-201ENST00000308521 ATRNL1Q5VV63 1379 aa11.46□□□□□ -0.58
APOBEC3F-201ENST00000308521 CCDC194A0A1B0GVG4 234 aa11.45□□□□□ -0.58
APOBEC3F-201ENST00000308521 GTPBP6O43824 516 aaPredicted RBP11.45□□□□□ -0.58
APOBEC3F-201ENST00000308521 CDC25AP30304 524 aa11.45□□□□□ -0.58
APOBEC3F-201ENST00000308521 E2F4Q16254 413 aa11.45□□□□□ -0.58
APOBEC3F-201ENST00000308521 TCP11X2Q5H9J9 407 aa11.45□□□□□ -0.58
APOBEC3F-201ENST00000308521 GLIS2Q9BZE0 524 aaPredicted RBP11.45□□□□□ -0.58
APOBEC3F-201ENST00000308521 SPON1Q9HCB6 807 aa11.45□□□□□ -0.58
APOBEC3F-201ENST00000308521 BRCA1P38398 1863 aaKnown RBP11.45□□□□□ -0.58
APOBEC3F-201ENST00000308521 MYH4Q9Y623 1939 aa11.45□□□□□ -0.58
APOBEC3F-201ENST00000308521 RNF225M0QZC1 329 aaPredicted RBP11.45□□□□□ -0.58
APOBEC3F-201ENST00000308521 PPFIA4O75335 1185 aa11.45□□□□□ -0.58
APOBEC3F-201ENST00000308521 PRPF6O94906 941 aaKnown RBP11.45□□□□□ -0.58
APOBEC3F-201ENST00000308521 NDUFA10O95299 355 aa11.45□□□□□ -0.58
APOBEC3F-201ENST00000308521 SYF2O95926 243 aaKnown RBP11.45□□□□□ -0.58
APOBEC3F-201ENST00000308521 CALML3P27482 149 aa11.45□□□□□ -0.58
APOBEC3F-201ENST00000308521 KRT9P35527 623 aa11.45□□□□□ -0.58
APOBEC3F-201ENST00000308521 CCT6AP40227 531 aaKnown RBP11.45□□□□□ -0.58
APOBEC3F-201ENST00000308521 PAK1Q13153 545 aa11.45□□□□□ -0.58
APOBEC3F-201ENST00000308521 KIAA1755Q5JYT7 1200 aa11.45□□□□□ -0.58
APOBEC3F-201ENST00000308521 PAPD7Q5XG87 772 aaKnown RBP11.45□□□□□ -0.58
APOBEC3F-201ENST00000308521 SMYD4Q8IYR2 804 aaPredicted RBP11.45□□□□□ -0.58
APOBEC3F-201ENST00000308521 SLF1Q9BQI6 1058 aa11.45□□□□□ -0.58
APOBEC3F-201ENST00000308521 FAM204AQ9H8W3 233 aa11.45□□□□□ -0.58
APOBEC3F-201ENST00000308521 TMCO5BA8MYB1 307 aa11.44□□□□□ -0.58
APOBEC3F-201ENST00000308521 KCNJ18B7U540 433 aa11.44□□□□□ -0.58
APOBEC3F-201ENST00000308521 NDUFB10O96000 172 aa11.44□□□□□ -0.58
APOBEC3F-201ENST00000308521 TFRCP02786 760 aaKnown RBP11.44□□□□□ -0.58
APOBEC3F-201ENST00000308521 CASP1P29466 404 aa11.44□□□□□ -0.58
APOBEC3F-201ENST00000308521 ATP2C1P98194 919 aaPredicted RBP11.44□□□□□ -0.58
APOBEC3F-201ENST00000308521 SETQ01105 290 aaPredicted RBP11.44□□□□□ -0.58
APOBEC3F-201ENST00000308521 KCNJ12Q14500 433 aa11.44□□□□□ -0.58
APOBEC3F-201ENST00000308521 ZKSCAN8Q15776 578 aaPredicted RBP11.44□□□□□ -0.58
APOBEC3F-201ENST00000308521 RRAGBQ5VZM2 374 aa11.44□□□□□ -0.58
APOBEC3F-201ENST00000308521 AFAP1L1Q8TED9 768 aa11.44□□□□□ -0.58
APOBEC3F-201ENST00000308521 RMND1Q9NWS8 449 aa11.44□□□□□ -0.58
APOBEC3F-201ENST00000308521 NYAP2Q9P242 653 aa11.44□□□□□ -0.58
APOBEC3F-201ENST00000308521 REXO2Q9Y3B8 237 aaKnown RBP11.44□□□□□ -0.58
APOBEC3F-201ENST00000308521 A0A1W2PQC6 194 aa11.44□□□□□ -0.58
APOBEC3F-201ENST00000308521 H7C1D1 291 aa11.44□□□□□ -0.58
APOBEC3F-201ENST00000308521 M0R2N6 131 aa11.44□□□□□ -0.58
APOBEC3F-201ENST00000308521 FZD9O00144 591 aa11.44□□□□□ -0.58
APOBEC3F-201ENST00000308521 RNF40O75150 1001 aa11.44□□□□□ -0.58
APOBEC3F-201ENST00000308521 CKAP4Q07065 602 aaKnown RBP11.44□□□□□ -0.58
APOBEC3F-201ENST00000308521 UBE2SQ16763 222 aa11.44□□□□□ -0.58
APOBEC3F-201ENST00000308521 DNAJC21Q5F1R6 531 aaKnown RBP11.44□□□□□ -0.58
APOBEC3F-201ENST00000308521 ZNF658Q5TYW1 1059 aaPredicted RBP11.44□□□□□ -0.58
APOBEC3F-201ENST00000308521 NCAPH2Q6IBW4 605 aa11.44□□□□□ -0.58
APOBEC3F-201ENST00000308521 PDXDC2PQ6P474 469 aa11.44□□□□□ -0.58
APOBEC3F-201ENST00000308521 OR8K1Q8NGG5 319 aa11.44□□□□□ -0.58
APOBEC3F-201ENST00000308521 MKL1Q969V6 931 aa11.44□□□□□ -0.58
APOBEC3F-201ENST00000308521 ZBED3Q96IU2 234 aaPredicted RBP11.44□□□□□ -0.58
APOBEC3F-201ENST00000308521 UIMC1Q96RL1 719 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms