RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 MCUR1Q96AQ8 359 aa9.09□□□□□ -0.96
PCDHB1-201ENST00000306549 NOC4LQ9BVI4 516 aaKnown RBP9.09□□□□□ -0.96
PCDHB1-201ENST00000306549 ANAPC5Q9UJX4 755 aa9.09□□□□□ -0.96
PCDHB1-201ENST00000306549 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.09□□□□□ -0.96
PCDHB1-201ENST00000306549 MAP3K7O43318 606 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 PPFIA3O75145 1194 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 CAMTA2O94983 1202 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 SLC10A5Q5PT55 438 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 C4orf50Q6ZRC1 276 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 GPATCH11Q8N954 259 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 CALR3Q96L12 384 aaKnown RBP9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 DNAI1Q9UI46 699 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 PSDA5PKW4 1024 aaPredicted RBP9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 HEXIM1O94992 359 aaKnown RBP9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 KRT76Q01546 638 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 FAM47AQ5JRC9 791 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 KRT222Q8N1A0 295 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 RNF169Q8NCN4 708 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 SKA2Q8WVK7 121 aaPredicted RBP9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 P3H4Q92791 437 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 HESX1Q9UBX0 185 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 RGPD5Q99666 1765 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 SLIT3O75094 1523 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 SKILP12757 684 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 SMARCA1P28370 1054 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 GCLCP48506 637 aaPredicted RBP9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 TYRO3Q06418 890 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 TRIM11Q96F44 468 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 C1orf112Q9NSG2 853 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 RIPOR2Q9Y4F9 1068 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 PRPF3O43395 683 aaKnown RBP9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 ZNF202O95125 648 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 TNNI1P19237 187 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 MAN1A1P33908 653 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 HS1BP3Q53T59 392 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 FAM182BQ5T319 152 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 MYOCDQ8IZQ8 938 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 FBXO18Q8NFZ0 1043 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 UBE2Q2Q8WVN8 375 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 DACT3Q96B18 629 aaPredicted RBP9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 TRIM62Q9BVG3 475 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 THAP12O43422 761 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 LDHAP00338 332 aaKnown RBP9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 INPP1P49441 399 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 GTF2A2P52657 109 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 KRT81Q14533 505 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 E2F5Q15329 346 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 ANO6Q4KMQ2 910 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 GOLGA8QA0A0J9YX86 632 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 GOLGA8OA6NCC3 632 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 GOLGA8NF8WBI6 632 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 VEGFAP15692 232 aaPredicted RBP9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 INHBEP58166 350 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 SDCCAG3Q96C92 435 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 ANKRD36BP1Q96IX9 119 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 FAM20AQ96MK3 541 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 VPS54Q9P1Q0 977 aa9.08□□□□□ -0.96
PCDHB1-201ENST00000306549 FKBP1AP62942 108 aaKnown RBP9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 ARHGAP4P98171 946 aa9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 HHATQ5VTY9 493 aa9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 KIAA1841Q6NSI8 718 aa9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 GBP6Q6ZN66 633 aa9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 MAP3K14Q99558 947 aa9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 ACAD9Q9H845 621 aa9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 TOPORSQ9NS56 1045 aaPredicted RBP9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 PDS5AQ29RF7 1337 aaKnown RBP9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 A0A0D9SFI3 127 aa9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 ZBTB5O15062 677 aa9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 ORC4O43929 436 aa9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 TNFAIP2Q03169 654 aa9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 COG2Q14746 738 aa9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 NOP9Q86U38 636 aaKnown RBP9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 CAPZA3Q96KX2 299 aa9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 C2orf40Q9H1Z8 148 aa9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 MYOM1P52179 1685 aa9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 APOA5Q6Q788 366 aa9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 ZNF280CQ8ND82 737 aa9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 CHMP6Q96FZ7 201 aa9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 PLCB1Q9NQ66 1216 aa9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 SLC12A6Q9UHW9 1150 aa9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 PRPSAP1Q14558 356 aa9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 LMNTD2Q8IXW0 634 aa9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 CCDC170Q8IYT3 715 aa9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 AOPEPQ8N6M6 819 aa9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 CCDC51Q96ER9 411 aa9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 AKT3Q9Y243 479 aa9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 EIF3CLB5ME19 914 aaKnown RBP9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 STXBP3O00186 592 aa9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 TMEM191BP0C7N4 346 aa9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 RXRAP19793 462 aa9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 EIF3CQ99613 913 aaKnown RBP9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 PARP2Q9UGN5 583 aa9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 ASIC3Q9UHC3 531 aa9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 BRPF3Q9ULD4 1205 aa9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 RNASELQ05823 741 aaKnown RBP9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 ITKQ08881 620 aa9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 GPBP1Q86WP2 473 aa9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 TEX13BQ9BXU2 312 aa9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 SEL1LQ9UBV2 794 aa9.07□□□□□ -0.96
PCDHB1-201ENST00000306549 GSTA1P08263 222 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms