RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 FAM160B2Q86V87 743 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 LDHDQ86WU2 507 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 FAM20AQ96MK3 541 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 PANX2Q96RD6 677 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 WDR18Q9BV38 432 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 SH2D4AQ9H788 454 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 POTEFA5A3E0 1075 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 MFAP3LO75121 409 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 POTEIP0CG38 1075 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 MTF1Q14872 753 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 POTEGQ6S5H5 508 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 POTEEQ6S8J3 1075 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 CCDC47Q96A33 483 aaKnown RBP7.31□□□□□ -1.24
USP47-201ENST00000305481 AGBL1Q96MI9 1066 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 FGFBP2Q9BYJ0 223 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 NT5C3AQ9H0P0 336 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 KDM3AQ9Y4C1 1321 aa7.31□□□□□ -1.24
USP47-201ENST00000305481 LGALS16A8MUM7 142 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 GCOM1H8Y6P7 765 aaPredicted RBP7.3□□□□□ -1.24
USP47-201ENST00000305481 EML1O00423 815 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 FANCGO15287 622 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 PLA2G4BP0C869 781 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 POLR2MP0CAP2 368 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 IDEP14735 1019 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 SLC12A3P55017 1021 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 UBXN2AP68543 259 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 TNFAIP1Q13829 316 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 LRRC41Q15345 812 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 MB21D1Q8N884 522 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 ZNF592Q92610 1267 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 ZFP91Q96JP5 570 aaPredicted RBP7.3□□□□□ -1.24
USP47-201ENST00000305481 KIAA1683Q9H0B3 1180 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 PCDHA2Q9Y5H9 948 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 BICDL2A1A5D9 508 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 SOWAHDA6NJG2 315 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 MEIS1O00470 390 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 CTNND1O60716 968 aaKnown RBP7.3□□□□□ -1.24
USP47-201ENST00000305481 CYP11B2P19099 503 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 FECHP22830 423 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 RPA1P27694 616 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 UBXN1Q04323 297 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 COASYQ13057 564 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 MIIPQ5JXC2 388 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 NCAPH2Q6IBW4 605 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 TRIM65Q6PJ69 517 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 PPFIBP1Q86W92 1011 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 GUF1Q8N442 669 aaKnown RBP7.3□□□□□ -1.24
USP47-201ENST00000305481 CLEC4DQ8WXI8 215 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 GTPBP4Q9BZE4 634 aaKnown RBP7.3□□□□□ -1.24
USP47-201ENST00000305481 FZD1Q9UP38 647 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 PPP2R2CQ9Y2T4 447 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 PAXBP1Q9Y5B6 917 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 RASSF10A6NK89 507 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 TULP1O00294 542 aaPredicted RBP7.3□□□□□ -1.24
USP47-201ENST00000305481 SLC26A4O43511 780 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 NRDCO43847 1150 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 CACNB1Q02641 598 aaPredicted RBP7.3□□□□□ -1.24
USP47-201ENST00000305481 TRAF1Q13077 416 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 KIF4BQ2VIQ3 1234 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 PRAMEF18Q5VWM3 479 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 RAD9BQ6WBX8 426 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 TEX2Q8IWB9 1127 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 NOC3LQ8WTT2 800 aaKnown RBP7.3□□□□□ -1.24
USP47-201ENST00000305481 FEZ1Q99689 392 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 TUBGCP2Q9BSJ2 902 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 LRRC27Q9C0I9 530 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 EMILIN3Q9NT22 766 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 PANK4Q9NVE7 773 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 COL20A1Q9P218 1284 aa7.3□□□□□ -1.24
USP47-201ENST00000305481 MRPL11Q9Y3B7 192 aaKnown RBP7.3□□□□□ -1.24
USP47-201ENST00000305481 DYNC1I1O14576 645 aa7.29□□□□□ -1.24
USP47-201ENST00000305481 ICAM1P05362 532 aa7.29□□□□□ -1.24
USP47-201ENST00000305481 SSBP05455 408 aaKnown RBP eCLIP7.29□□□□□ -1.24
USP47-201ENST00000305481 PPP1R2P41236 205 aa7.29□□□□□ -1.24
USP47-201ENST00000305481 PSMD2Q13200 908 aa7.29□□□□□ -1.24
USP47-201ENST00000305481 OTOP1Q7RTM1 612 aa7.29□□□□□ -1.24
USP47-201ENST00000305481 GPBP1Q86WP2 473 aa7.29□□□□□ -1.24
USP47-201ENST00000305481 ANKRD20A12PQ8NF67 263 aa7.29□□□□□ -1.24
USP47-201ENST00000305481 CNOT6LQ96LI5 555 aaKnown RBP7.29□□□□□ -1.24
USP47-201ENST00000305481 DESI2Q9BSY9 194 aa7.29□□□□□ -1.24
USP47-201ENST00000305481 ABCB11O95342 1321 aa7.29□□□□□ -1.24
USP47-201ENST00000305481 A0A1W2PQC6 194 aa7.29□□□□□ -1.24
USP47-201ENST00000305481 FRMD3A2A2Y4 597 aa7.29□□□□□ -1.24
USP47-201ENST00000305481 B4DLN1 442 aa7.29□□□□□ -1.24
USP47-201ENST00000305481 NFIBO00712 420 aa7.29□□□□□ -1.24
USP47-201ENST00000305481 WDR46O15213 610 aaKnown RBP7.29□□□□□ -1.24
USP47-201ENST00000305481 CTIFO43310 598 aaKnown RBP7.29□□□□□ -1.24
USP47-201ENST00000305481 PSMD10O75832 226 aa7.29□□□□□ -1.24
USP47-201ENST00000305481 ZNF76P36508 570 aa7.29□□□□□ -1.24
USP47-201ENST00000305481 HSD17B4P51659 736 aa7.29□□□□□ -1.24
USP47-201ENST00000305481 RAD51AP2Q09MP3 1159 aa7.29□□□□□ -1.24
USP47-201ENST00000305481 MTMR2Q13614 643 aa7.29□□□□□ -1.24
USP47-201ENST00000305481 ZCWPW2Q504Y3 356 aa7.29□□□□□ -1.24
USP47-201ENST00000305481 SYT10Q6XYQ8 523 aa7.29□□□□□ -1.24
USP47-201ENST00000305481 LRRC55Q6ZSA7 311 aa7.29□□□□□ -1.24
USP47-201ENST00000305481 PRPF38AQ8NAV1 312 aaKnown RBP7.29□□□□□ -1.24
USP47-201ENST00000305481 TRPM4Q8TD43 1214 aa7.29□□□□□ -1.24
USP47-201ENST00000305481 LPAR1Q92633 364 aa7.29□□□□□ -1.24
USP47-201ENST00000305481 HSD17B14Q9BPX1 270 aa7.29□□□□□ -1.24
USP47-201ENST00000305481 SLF1Q9BQI6 1058 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms