RNA–Protein interactions for RNA: ENST00000304338.7

PPP4R4-201, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4R4, Length 3,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-201ENST00000304338 SMCR8Q8TEV9 937 aaPredicted RBP16.74■□□□□ 0.27
PPP4R4-201ENST00000304338 LRRC15Q8TF66 581 aa16.74■□□□□ 0.27
PPP4R4-201ENST00000304338 RAVER2Q9HCJ3 691 aaKnown RBP16.74■□□□□ 0.27
PPP4R4-201ENST00000304338 BLOC1S4Q9NUP1 217 aa16.74■□□□□ 0.27
PPP4R4-201ENST00000304338 TTC26A0AVF1 554 aa16.74■□□□□ 0.27
PPP4R4-201ENST00000304338 GCNT3O95395 438 aa16.74■□□□□ 0.27
PPP4R4-201ENST00000304338 VIL1P09327 827 aaKnown RBP16.74■□□□□ 0.27
PPP4R4-201ENST00000304338 USP11P51784 963 aa16.74■□□□□ 0.27
PPP4R4-201ENST00000304338 DGKZQ13574 1117 aa16.74■□□□□ 0.27
PPP4R4-201ENST00000304338 GLIS3Q8NEA6 775 aa16.74■□□□□ 0.27
PPP4R4-201ENST00000304338 MKL1Q969V6 931 aa16.74■□□□□ 0.27
PPP4R4-201ENST00000304338 AGBL1Q96MI9 1066 aa16.74■□□□□ 0.27
PPP4R4-201ENST00000304338 MAP7D2Q96T17 732 aa16.74■□□□□ 0.27
PPP4R4-201ENST00000304338 PICK1Q9NRD5 415 aa16.74■□□□□ 0.27
PPP4R4-201ENST00000304338 KLK7P49862 253 aa16.74■□□□□ 0.27
PPP4R4-201ENST00000304338 SPP2Q13103 211 aa16.74■□□□□ 0.27
PPP4R4-201ENST00000304338 LDHDQ86WU2 507 aa16.74■□□□□ 0.27
PPP4R4-201ENST00000304338 MYCT1Q8N699 235 aa16.74■□□□□ 0.27
PPP4R4-201ENST00000304338 CCDC42Q96M95 316 aa16.74■□□□□ 0.27
PPP4R4-201ENST00000304338 RNF216Q9NWF9 866 aaPredicted RBP16.74■□□□□ 0.27
PPP4R4-201ENST00000304338 TAF1LQ8IZX4 1826 aa16.74■□□□□ 0.27
PPP4R4-201ENST00000304338 A0A1B0GUL6 1792 aa16.74■□□□□ 0.27
PPP4R4-201ENST00000304338 KLRC4O43908 158 aa16.73■□□□□ 0.27
PPP4R4-201ENST00000304338 FKBP1AP62942 108 aaKnown RBP16.73■□□□□ 0.27
PPP4R4-201ENST00000304338 RASSF7Q02833 373 aa16.73■□□□□ 0.27
PPP4R4-201ENST00000304338 COASYQ13057 564 aa16.73■□□□□ 0.27
PPP4R4-201ENST00000304338 THAP9Q9H5L6 903 aa16.73■□□□□ 0.27
PPP4R4-201ENST00000304338 VCPKMTQ9H867 229 aa16.73■□□□□ 0.27
PPP4R4-201ENST00000304338 LIMA1Q9UHB6 759 aaKnown RBP16.73■□□□□ 0.27
PPP4R4-201ENST00000304338 MEIS2O14770 477 aa16.73■□□□□ 0.27
PPP4R4-201ENST00000304338 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.73■□□□□ 0.27
PPP4R4-201ENST00000304338 PDCL3Q9H2J4 239 aa16.73■□□□□ 0.27
PPP4R4-201ENST00000304338 CNOT7Q9UIV1 285 aaKnown RBP16.73■□□□□ 0.27
PPP4R4-201ENST00000304338 PPP1R2P41236 205 aa16.73■□□□□ 0.27
PPP4R4-201ENST00000304338 GMPSP49915 693 aaPredicted RBP16.73■□□□□ 0.27
PPP4R4-201ENST00000304338 SPDYE2Q495Y8 402 aa16.73■□□□□ 0.27
PPP4R4-201ENST00000304338 RAD9BQ6WBX8 426 aa16.73■□□□□ 0.27
PPP4R4-201ENST00000304338 NYAP1Q6ZVC0 841 aa16.73■□□□□ 0.27
PPP4R4-201ENST00000304338 MTERF4Q7Z6M4 381 aaKnown RBP16.73■□□□□ 0.27
PPP4R4-201ENST00000304338 SYCP3Q8IZU3 236 aa16.73■□□□□ 0.27
PPP4R4-201ENST00000304338 GMCL1Q96IK5 515 aa16.73■□□□□ 0.27
PPP4R4-201ENST00000304338 ZNF577Q9BSK1 485 aa16.73■□□□□ 0.27
PPP4R4-201ENST00000304338 MACROD2A1Z1Q3 448 aa16.72■□□□□ 0.27
PPP4R4-201ENST00000304338 LGALS16A8MUM7 142 aa16.72■□□□□ 0.27
PPP4R4-201ENST00000304338 FAM86B1E9PN63 330 aa16.72■□□□□ 0.27
PPP4R4-201ENST00000304338 FAM86B2P0C5J1 330 aa16.72■□□□□ 0.27
PPP4R4-201ENST00000304338 ECM1Q16610 540 aa16.72■□□□□ 0.27
PPP4R4-201ENST00000304338 RRAGAQ7L523 313 aa16.72■□□□□ 0.27
PPP4R4-201ENST00000304338 CAGE1Q8TC20 777 aa16.72■□□□□ 0.27
PPP4R4-201ENST00000304338 CHP1Q99653 195 aa16.72■□□□□ 0.27
PPP4R4-201ENST00000304338 SH2D3AQ9BRG2 576 aa16.72■□□□□ 0.27
PPP4R4-201ENST00000304338 COL24A1Q17RW2 1714 aa16.72■□□□□ 0.27
PPP4R4-201ENST00000304338 EIF2AK2P19525 551 aaKnown RBP16.72■□□□□ 0.27
PPP4R4-201ENST00000304338 CAP2P40123 477 aa16.72■□□□□ 0.27
PPP4R4-201ENST00000304338 CCDC122Q5T0U0 273 aa16.72■□□□□ 0.27
PPP4R4-201ENST00000304338 NEK11Q8NG66 645 aa16.72■□□□□ 0.27
PPP4R4-201ENST00000304338 PSMD1Q99460 953 aa16.72■□□□□ 0.27
PPP4R4-201ENST00000304338 ABHD10Q9NUJ1 306 aa16.72■□□□□ 0.27
PPP4R4-201ENST00000304338 RABGAP1Q9Y3P9 1069 aa16.72■□□□□ 0.27
PPP4R4-201ENST00000304338 ABCB11O95342 1321 aa16.72■□□□□ 0.27
PPP4R4-201ENST00000304338 UBR3Q6ZT12 1888 aa16.72■□□□□ 0.27
PPP4R4-201ENST00000304338 MED24O75448 989 aa16.72■□□□□ 0.27
PPP4R4-201ENST00000304338 ORC2Q13416 577 aaPredicted RBP16.72■□□□□ 0.27
PPP4R4-201ENST00000304338 TRIM14Q14142 442 aa16.72■□□□□ 0.27
PPP4R4-201ENST00000304338 TTLL12Q14166 644 aaPredicted RBP16.72■□□□□ 0.27
PPP4R4-201ENST00000304338 KIAA0895Q8NCT3 520 aa16.72■□□□□ 0.27
PPP4R4-201ENST00000304338 PANX2Q96RD6 677 aa16.72■□□□□ 0.27
PPP4R4-201ENST00000304338 PCDHB13Q9Y5F0 798 aa16.72■□□□□ 0.27
PPP4R4-201ENST00000304338 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.72■□□□□ 0.27
PPP4R4-201ENST00000304338 TESPA1A2RU30 521 aaPredicted RBP16.71■□□□□ 0.27
PPP4R4-201ENST00000304338 ADAM9Q13443 819 aa16.71■□□□□ 0.27
PPP4R4-201ENST00000304338 TTI2Q6NXR4 508 aa16.71■□□□□ 0.27
PPP4R4-201ENST00000304338 GMCL1P1Q8NEA9 526 aa16.71■□□□□ 0.27
PPP4R4-201ENST00000304338 SLC16A10Q8TF71 515 aa16.71■□□□□ 0.27
PPP4R4-201ENST00000304338 WDR24Q96S15 920 aa16.71■□□□□ 0.27
PPP4R4-201ENST00000304338 EMILIN3Q9NT22 766 aa16.71■□□□□ 0.27
PPP4R4-201ENST00000304338 TMX2Q9Y320 296 aa16.71■□□□□ 0.27
PPP4R4-201ENST00000304338 PLIN4Q96Q06 1357 aa16.71■□□□□ 0.27
PPP4R4-201ENST00000304338 LY75O60449 1722 aa16.71■□□□□ 0.27
PPP4R4-201ENST00000304338 PRPF6O94906 941 aaKnown RBP16.71■□□□□ 0.27
PPP4R4-201ENST00000304338 EGFRP00533 1210 aa16.71■□□□□ 0.27
PPP4R4-201ENST00000304338 PSMC6P62333 389 aa16.71■□□□□ 0.27
PPP4R4-201ENST00000304338 RDH13Q8NBN7 331 aa16.71■□□□□ 0.27
PPP4R4-201ENST00000304338 AGBL3Q8NEM8 1001 aa16.71■□□□□ 0.27
PPP4R4-201ENST00000304338 EPN1Q9Y6I3 576 aaPredicted RBP16.71■□□□□ 0.27
PPP4R4-201ENST00000304338 PVALEFA0A1B0GWK0 134 aa16.71■□□□□ 0.27
PPP4R4-201ENST00000304338 CYLC1P35663 651 aaPredicted RBP16.71■□□□□ 0.27
PPP4R4-201ENST00000304338 CYP27A1Q02318 531 aa16.71■□□□□ 0.27
PPP4R4-201ENST00000304338 GRIPAP1Q4V328 841 aa16.71■□□□□ 0.27
PPP4R4-201ENST00000304338 WDR78Q5VTH9 848 aa16.71■□□□□ 0.27
PPP4R4-201ENST00000304338 CATSPER3Q86XQ3 398 aa16.71■□□□□ 0.27
PPP4R4-201ENST00000304338 AGPAT5Q9NUQ2 364 aa16.71■□□□□ 0.27
PPP4R4-201ENST00000304338 CETN3O15182 167 aa16.71■□□□□ 0.26
PPP4R4-201ENST00000304338 CLIC2O15247 247 aa16.71■□□□□ 0.26
PPP4R4-201ENST00000304338 MTMR2Q13614 643 aa16.71■□□□□ 0.26
PPP4R4-201ENST00000304338 NAA15Q9BXJ9 866 aaKnown RBP16.71■□□□□ 0.26
PPP4R4-201ENST00000304338 NDST4Q9H3R1 872 aa16.71■□□□□ 0.26
PPP4R4-201ENST00000304338 MSH4O15457 936 aa16.7■□□□□ 0.26
PPP4R4-201ENST00000304338 INPP5BP32019 993 aa16.7■□□□□ 0.26
PPP4R4-201ENST00000304338 ERO1AQ96HE7 468 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms