RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 FLAD1Q8NFF5 587 aa15.15■□□□□ 0.02
PRKCB-201ENST00000303531 PLEKHG1Q9ULL1 1385 aa15.15■□□□□ 0.02
PRKCB-201ENST00000303531 VGLL3A8MV65 326 aa15.14■□□□□ 0.02
PRKCB-201ENST00000303531 ADCY1Q08828 1119 aa15.14■□□□□ 0.02
PRKCB-201ENST00000303531 SGO2Q562F6 1265 aa15.14■□□□□ 0.02
PRKCB-201ENST00000303531 TRIM11Q96F44 468 aa15.14■□□□□ 0.02
PRKCB-201ENST00000303531 SLC5A4Q9NY91 659 aa15.14■□□□□ 0.02
PRKCB-201ENST00000303531 NLRP1Q9C000 1473 aa15.14■□□□□ 0.01
PRKCB-201ENST00000303531 ABL1P00519 1130 aa15.14■□□□□ 0.01
PRKCB-201ENST00000303531 SATB1Q01826 763 aa15.14■□□□□ 0.01
PRKCB-201ENST00000303531 KMT5BQ4FZB7 885 aa15.14■□□□□ 0.01
PRKCB-201ENST00000303531 PANX2Q96RD6 677 aa15.14■□□□□ 0.01
PRKCB-201ENST00000303531 ARHGAP4P98171 946 aa15.14■□□□□ 0.01
PRKCB-201ENST00000303531 SERPINB13Q9UIV8 391 aa15.14■□□□□ 0.01
PRKCB-201ENST00000303531 CDK12Q9NYV4 1490 aaPredicted RBP15.14■□□□□ 0.01
PRKCB-201ENST00000303531 SNCBQ16143 134 aa15.14■□□□□ 0.01
PRKCB-201ENST00000303531 CDKL2Q92772 493 aa15.14■□□□□ 0.01
PRKCB-201ENST00000303531 KMT5AQ9NQR1 393 aa15.14■□□□□ 0.01
PRKCB-201ENST00000303531 EMILIN3Q9NT22 766 aa15.14■□□□□ 0.01
PRKCB-201ENST00000303531 JRKLQ9Y4A0 524 aa15.14■□□□□ 0.01
PRKCB-201ENST00000303531 CNKSR1Q969H4 720 aa15.14■□□□□ 0.01
PRKCB-201ENST00000303531 WDR11Q9BZH6 1224 aa15.14■□□□□ 0.01
PRKCB-201ENST00000303531 GSTA1P08263 222 aa15.14■□□□□ 0.01
PRKCB-201ENST00000303531 GSTA2P09210 222 aa15.14■□□□□ 0.01
PRKCB-201ENST00000303531 PPP2R5AQ15172 486 aa15.14■□□□□ 0.01
PRKCB-201ENST00000303531 PCDHA13Q9Y5I0 950 aa15.14■□□□□ 0.01
PRKCB-201ENST00000303531 SPOUT1Q5T280 376 aaKnown RBP15.14■□□□□ 0.01
PRKCB-201ENST00000303531 STAG1Q8WVM7 1258 aa15.14■□□□□ 0.01
PRKCB-201ENST00000303531 NACC1Q96RE7 527 aa15.14■□□□□ 0.01
PRKCB-201ENST00000303531 KANSL2Q9H9L4 492 aa15.14■□□□□ 0.01
PRKCB-201ENST00000303531 GARSP41250 739 aaKnown RBP15.13■□□□□ 0.01
PRKCB-201ENST00000303531 LLGL1Q15334 1064 aa15.13■□□□□ 0.01
PRKCB-201ENST00000303531 WDR70Q9NW82 654 aa15.13■□□□□ 0.01
PRKCB-201ENST00000303531 HEG1Q9ULI3 1381 aa15.13■□□□□ 0.01
PRKCB-201ENST00000303531 CCDC151A5D8V7 595 aa15.13■□□□□ 0.01
PRKCB-201ENST00000303531 ECEL1O95672 775 aa15.13■□□□□ 0.01
PRKCB-201ENST00000303531 CLCN6P51797 869 aa15.13■□□□□ 0.01
PRKCB-201ENST00000303531 RASGRF1Q13972 1273 aa15.13■□□□□ 0.01
PRKCB-201ENST00000303531 SPZ1Q9BXG8 430 aa15.13■□□□□ 0.01
PRKCB-201ENST00000303531 CFAP74Q9C0B2 1584 aa15.13■□□□□ 0.01
PRKCB-201ENST00000303531 CYP27A1Q02318 531 aa15.13■□□□□ 0.01
PRKCB-201ENST00000303531 TCP11X2Q5H9J9 407 aa15.13■□□□□ 0.01
PRKCB-201ENST00000303531 SPC25Q9HBM1 224 aa15.13■□□□□ 0.01
PRKCB-201ENST00000303531 UBE2SQ16763 222 aa15.13■□□□□ 0.01
PRKCB-201ENST00000303531 ROBO2Q9HCK4 1378 aa15.13■□□□□ 0.01
PRKCB-201ENST00000303531 OPHN1O60890 802 aa15.13■□□□□ 0.01
PRKCB-201ENST00000303531 SERPING1P05155 500 aa15.13■□□□□ 0.01
PRKCB-201ENST00000303531 USP17L3A6NCW0 530 aa15.13■□□□□ 0.01
PRKCB-201ENST00000303531 USP17L4A6NCW7 530 aa15.13■□□□□ 0.01
PRKCB-201ENST00000303531 RFC1P35251 1148 aaPredicted RBP15.13■□□□□ 0.01
PRKCB-201ENST00000303531 TFDP1Q14186 410 aa15.13■□□□□ 0.01
PRKCB-201ENST00000303531 USP17L1Q7RTZ2 530 aa15.13■□□□□ 0.01
PRKCB-201ENST00000303531 SLC7A3Q8WY07 619 aa15.13■□□□□ 0.01
PRKCB-201ENST00000303531 PALM3A6NDB9 673 aaPredicted RBP15.12■□□□□ 0.01
PRKCB-201ENST00000303531 TTC36A6NLP5 189 aa15.12■□□□□ 0.01
PRKCB-201ENST00000303531 DHX9Q08211 1270 aaKnown RBP15.12■□□□□ 0.01
PRKCB-201ENST00000303531 ZKSCAN8Q15776 578 aaPredicted RBP15.12■□□□□ 0.01
PRKCB-201ENST00000303531 CYP4F22Q6NT55 531 aa15.12■□□□□ 0.01
PRKCB-201ENST00000303531 PBKQ96KB5 322 aa15.12■□□□□ 0.01
PRKCB-201ENST00000303531 UBE2TQ9NPD8 197 aaPredicted RBP15.12■□□□□ 0.01
PRKCB-201ENST00000303531 RNF14Q9UBS8 474 aa15.12■□□□□ 0.01
PRKCB-201ENST00000303531 RRP15Q9Y3B9 282 aaKnown RBP15.12■□□□□ 0.01
PRKCB-201ENST00000303531 PLA2G4BP0C869 781 aa15.12■□□□□ 0.01
PRKCB-201ENST00000303531 TMEM206Q9H813 350 aa15.12■□□□□ 0.01
PRKCB-201ENST00000303531 BMP3P12645 472 aa15.12■□□□□ 0.01
PRKCB-201ENST00000303531 PDE1BQ01064 536 aa15.12■□□□□ 0.01
PRKCB-201ENST00000303531 RBBP5Q15291 538 aaKnown RBP15.12■□□□□ 0.01
PRKCB-201ENST00000303531 KRT31Q15323 416 aa15.12■□□□□ 0.01
PRKCB-201ENST00000303531 NDST4Q9H3R1 872 aa15.12■□□□□ 0.01
PRKCB-201ENST00000303531 TMEM94Q12767 1356 aa15.12■□□□□ 0.01
PRKCB-201ENST00000303531 TLR3O15455 904 aaKnown RBP15.12■□□□□ 0.01
PRKCB-201ENST00000303531 OATP04181 439 aa15.12■□□□□ 0.01
PRKCB-201ENST00000303531 MECOMQ03112 1051 aa15.12■□□□□ 0.01
PRKCB-201ENST00000303531 PSMD2Q13200 908 aa15.12■□□□□ 0.01
PRKCB-201ENST00000303531 KIF1BO60333 1816 aa15.12■□□□□ 0.01
PRKCB-201ENST00000303531 ERBB3P21860 1342 aa15.12■□□□□ 0.01
PRKCB-201ENST00000303531 NLGN1Q8N2Q7 840 aa15.12■□□□□ 0.01
PRKCB-201ENST00000303531 ANKRD36BP1Q96IX9 119 aa15.12■□□□□ 0.01
PRKCB-201ENST00000303531 APOL6Q9BWW8 343 aa15.12■□□□□ 0.01
PRKCB-201ENST00000303531 SAMD9LQ8IVG5 1584 aa15.12■□□□□ 0.01
PRKCB-201ENST00000303531 EIF3CLB5ME19 914 aaKnown RBP15.11■□□□□ 0.01
PRKCB-201ENST00000303531 EIF3CQ99613 913 aaKnown RBP15.11■□□□□ 0.01
PRKCB-201ENST00000303531 DBNDD1Q9H9R9 158 aa15.11■□□□□ 0.01
PRKCB-201ENST00000303531 ANAPC5Q9UJX4 755 aa15.11■□□□□ 0.01
PRKCB-201ENST00000303531 PLEKHA8P1O95397 391 aa15.11■□□□□ 0.01
PRKCB-201ENST00000303531 ECE1P42892 770 aa15.11■□□□□ 0.01
PRKCB-201ENST00000303531 DMTNQ08495 405 aa15.11■□□□□ 0.01
PRKCB-201ENST00000303531 DIXDC1Q155Q3 683 aa15.11■□□□□ 0.01
PRKCB-201ENST00000303531 DBN1Q16643 649 aa15.11■□□□□ 0.01
PRKCB-201ENST00000303531 VCX3AQ9NNX9 186 aa15.11■□□□□ 0.01
PRKCB-201ENST00000303531 TOB2Q14106 344 aaPredicted RBP15.11■□□□□ 0.01
PRKCB-201ENST00000303531 TMED2Q15363 201 aa15.11■□□□□ 0.01
PRKCB-201ENST00000303531 RESP18Q5W5W9 173 aa15.11■□□□□ 0.01
PRKCB-201ENST00000303531 CLGNO14967 610 aa15.11■□□□□ 0.01
PRKCB-201ENST00000303531 SERPINB6P35237 376 aa15.11■□□□□ 0.01
PRKCB-201ENST00000303531 CEP170P1Q96L14 293 aa15.11■□□□□ 0.01
PRKCB-201ENST00000303531 WDR17Q8IZU2 1322 aa15.11■□□□□ 0.01
PRKCB-201ENST00000303531 GOLGA8SH3BPF8 625 aa15.11■□□□□ 0.01
PRKCB-201ENST00000303531 NNTQ13423 1086 aa15.11■□□□□ 0.01
PRKCB-201ENST00000303531 SEPT2Q15019 361 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms