RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 CCDC65Q8IXS2 484 aa21.65■■□□□ 1.06
HOXC4-201ENST00000303406 ZNF507Q8TCN5 953 aa21.65■■□□□ 1.06
HOXC4-201ENST00000303406 GLIS2Q9BZE0 524 aaPredicted RBP21.65■■□□□ 1.06
HOXC4-201ENST00000303406 VAV3Q9UKW4 847 aa21.65■■□□□ 1.06
HOXC4-201ENST00000303406 FRMD3A2A2Y4 597 aa21.65■■□□□ 1.06
HOXC4-201ENST00000303406 MED24O75448 989 aa21.65■■□□□ 1.06
HOXC4-201ENST00000303406 FDX1P10109 184 aa21.65■■□□□ 1.06
HOXC4-201ENST00000303406 MUTP22033 750 aa21.65■■□□□ 1.06
HOXC4-201ENST00000303406 DNM2P50570 870 aa21.65■■□□□ 1.06
HOXC4-201ENST00000303406 R3HDM1Q15032 1099 aaKnown RBP21.65■■□□□ 1.06
HOXC4-201ENST00000303406 KIF4BQ2VIQ3 1234 aa21.65■■□□□ 1.06
HOXC4-201ENST00000303406 DYMQ7RTS9 669 aa21.65■■□□□ 1.06
HOXC4-201ENST00000303406 MB21D1Q8N884 522 aa21.65■■□□□ 1.06
HOXC4-201ENST00000303406 PRPF38AQ8NAV1 312 aaKnown RBP21.65■■□□□ 1.06
HOXC4-201ENST00000303406 GJA10Q969M2 543 aa21.65■■□□□ 1.06
HOXC4-201ENST00000303406 SLF1Q9BQI6 1058 aa21.65■■□□□ 1.06
HOXC4-201ENST00000303406 SEMA6BQ9H3T3 888 aa21.65■■□□□ 1.06
HOXC4-201ENST00000303406 SLC39A2Q9NP94 309 aa21.65■■□□□ 1.06
HOXC4-201ENST00000303406 MAP3K20Q9NYL2 800 aaKnown RBP21.65■■□□□ 1.06
HOXC4-201ENST00000303406 HACL1Q9UJ83 578 aa21.65■■□□□ 1.06
HOXC4-201ENST00000303406 POTEB3A0JP26 581 aa21.64■■□□□ 1.05
HOXC4-201ENST00000303406 POTECB2RU33 542 aa21.64■■□□□ 1.05
HOXC4-201ENST00000303406 RIOK3O14730 519 aaKnown RBP21.64■■□□□ 1.05
HOXC4-201ENST00000303406 EGFRP00533 1210 aa21.64■■□□□ 1.05
HOXC4-201ENST00000303406 CFBP00751 764 aa21.64■■□□□ 1.05
HOXC4-201ENST00000303406 GYPCP04921 128 aa21.64■■□□□ 1.05
HOXC4-201ENST00000303406 HSD17B4P51659 736 aa21.64■■□□□ 1.05
HOXC4-201ENST00000303406 RASSF7Q02833 373 aa21.64■■□□□ 1.05
HOXC4-201ENST00000303406 GOLGA8FQ08AF8 430 aa21.64■■□□□ 1.05
HOXC4-201ENST00000303406 GOLGA8DPQ0D2H9 430 aa21.64■■□□□ 1.05
HOXC4-201ENST00000303406 COASYQ13057 564 aa21.64■■□□□ 1.05
HOXC4-201ENST00000303406 ZYXQ15942 572 aaKnown RBP21.64■■□□□ 1.05
HOXC4-201ENST00000303406 POTEBQ6S5H4 581 aa21.64■■□□□ 1.05
HOXC4-201ENST00000303406 APOBEC3FQ8IUX4 373 aaKnown RBP21.64■■□□□ 1.05
HOXC4-201ENST00000303406 KIF18AQ8NI77 898 aa21.64■■□□□ 1.05
HOXC4-201ENST00000303406 IQCDQ96DY2 449 aa21.64■■□□□ 1.05
HOXC4-201ENST00000303406 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.64■■□□□ 1.05
HOXC4-201ENST00000303406 PPP1R1BQ9UD71 204 aaPredicted RBP21.64■■□□□ 1.05
HOXC4-201ENST00000303406 ZNF112Q9UJU3 913 aa21.64■■□□□ 1.05
HOXC4-201ENST00000303406 E9PMD0 336 aa21.63■■□□□ 1.05
HOXC4-201ENST00000303406 KIF20AO95235 890 aa21.63■■□□□ 1.05
HOXC4-201ENST00000303406 USP14P54578 494 aa21.63■■□□□ 1.05
HOXC4-201ENST00000303406 SLC12A3P55017 1021 aa21.63■■□□□ 1.05
HOXC4-201ENST00000303406 SETQ01105 290 aaPredicted RBP21.63■■□□□ 1.05
HOXC4-201ENST00000303406 UBXN1Q04323 297 aa21.63■■□□□ 1.05
HOXC4-201ENST00000303406 CATSPER3Q86XQ3 398 aa21.63■■□□□ 1.05
HOXC4-201ENST00000303406 REXO1L1PQ8IX06 675 aa21.63■■□□□ 1.05
HOXC4-201ENST00000303406 SLC5A5Q92911 643 aa21.63■■□□□ 1.05
HOXC4-201ENST00000303406 CNOT6LQ96LI5 555 aaKnown RBP21.63■■□□□ 1.05
HOXC4-201ENST00000303406 WDR18Q9BV38 432 aa21.63■■□□□ 1.05
HOXC4-201ENST00000303406 PANK4Q9NVE7 773 aa21.63■■□□□ 1.05
HOXC4-201ENST00000303406 SPATA31C1P0DKV0 1188 aa21.62■■□□□ 1.05
HOXC4-201ENST00000303406 IDEP14735 1019 aa21.62■■□□□ 1.05
HOXC4-201ENST00000303406 TAL1P17542 331 aaPredicted RBP21.62■■□□□ 1.05
HOXC4-201ENST00000303406 CYP11B2P19099 503 aa21.62■■□□□ 1.05
HOXC4-201ENST00000303406 INPP5BP32019 993 aa21.62■■□□□ 1.05
HOXC4-201ENST00000303406 STAT3P40763 770 aa21.62■■□□□ 1.05
HOXC4-201ENST00000303406 PRELPP51888 382 aa21.62■■□□□ 1.05
HOXC4-201ENST00000303406 FAM26FQ5R3K3 315 aa21.62■■□□□ 1.05
HOXC4-201ENST00000303406 NCAPH2Q6IBW4 605 aa21.62■■□□□ 1.05
HOXC4-201ENST00000303406 MCF2L2Q86YR7 1114 aa21.62■■□□□ 1.05
HOXC4-201ENST00000303406 SYT2Q8N9I0 419 aaPredicted RBP21.62■■□□□ 1.05
HOXC4-201ENST00000303406 RETREG2Q8NC44 543 aa21.62■■□□□ 1.05
HOXC4-201ENST00000303406 TSG101Q99816 390 aa21.62■■□□□ 1.05
HOXC4-201ENST00000303406 TUBGCP2Q9BSJ2 902 aa21.62■■□□□ 1.05
HOXC4-201ENST00000303406 NUP58Q9BVL2 599 aa21.62■■□□□ 1.05
HOXC4-201ENST00000303406 FBXO28Q9NVF7 368 aa21.62■■□□□ 1.05
HOXC4-201ENST00000303406 PPP2R2CQ9Y2T4 447 aa21.62■■□□□ 1.05
HOXC4-201ENST00000303406 ZNF536O15090 1300 aa21.62■■□□□ 1.05
HOXC4-201ENST00000303406 RBBP6Q7Z6E9 1792 aaKnown RBP21.61■■□□□ 1.05
HOXC4-201ENST00000303406 CASP14P31944 242 aa21.61■■□□□ 1.05
HOXC4-201ENST00000303406 PPP2R5CQ13362 524 aa21.61■■□□□ 1.05
HOXC4-201ENST00000303406 SAMD7Q7Z3H4 446 aa21.61■■□□□ 1.05
HOXC4-201ENST00000303406 GPBP1Q86WP2 473 aa21.61■■□□□ 1.05
HOXC4-201ENST00000303406 MYOCDQ8IZQ8 938 aa21.61■■□□□ 1.05
HOXC4-201ENST00000303406 TUFT1Q9NNX1 390 aa21.61■■□□□ 1.05
HOXC4-201ENST00000303406 DNM3Q9UQ16 869 aa21.61■■□□□ 1.05
HOXC4-201ENST00000303406 PPP2R3BQ9Y5P8 575 aa21.61■■□□□ 1.05
HOXC4-201ENST00000303406 GJA3Q9Y6H8 435 aa21.61■■□□□ 1.05
HOXC4-201ENST00000303406 RPTORQ8N122 1335 aa21.61■■□□□ 1.05
HOXC4-201ENST00000303406 CTIFO43310 598 aaKnown RBP21.6■■□□□ 1.05
HOXC4-201ENST00000303406 PSMD10O75832 226 aa21.6■■□□□ 1.05
HOXC4-201ENST00000303406 SYCP1Q15431 976 aa21.6■■□□□ 1.05
HOXC4-201ENST00000303406 TBC1D10BQ4KMP7 808 aaPredicted RBP21.6■■□□□ 1.05
HOXC4-201ENST00000303406 CEP55Q53EZ4 464 aa21.6■■□□□ 1.05
HOXC4-201ENST00000303406 NIPA1Q7RTP0 329 aa21.6■■□□□ 1.05
HOXC4-201ENST00000303406 KRT26Q7Z3Y9 468 aa21.6■■□□□ 1.05
HOXC4-201ENST00000303406 TMTC1Q8IUR5 882 aa21.6■■□□□ 1.05
HOXC4-201ENST00000303406 TBC1D5Q92609 795 aa21.6■■□□□ 1.05
HOXC4-201ENST00000303406 AS3MTQ9HBK9 375 aa21.6■■□□□ 1.05
HOXC4-201ENST00000303406 CCPG1Q9ULG6 757 aa21.6■■□□□ 1.05
HOXC4-201ENST00000303406 PCDHA2Q9Y5H9 948 aa21.6■■□□□ 1.05
HOXC4-201ENST00000303406 DICER1Q9UPY3 1922 aaKnown RBP21.6■■□□□ 1.05
HOXC4-201ENST00000303406 PHLPP2Q6ZVD8 1323 aa21.6■■□□□ 1.05
HOXC4-201ENST00000303406 BCRP11274 1271 aa21.6■■□□□ 1.05
HOXC4-201ENST00000303406 FXR1P51114 621 aaKnown RBP eCLIP21.6■■□□□ 1.05
HOXC4-201ENST00000303406 ETF1P62495 437 aaKnown RBP21.6■■□□□ 1.05
HOXC4-201ENST00000303406 FIGNQ5HY92 759 aa21.6■■□□□ 1.05
HOXC4-201ENST00000303406 SCYL3Q8IZE3 742 aa21.6■■□□□ 1.05
HOXC4-201ENST00000303406 HPS3Q969F9 1004 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms