RNA–Protein interactions for RNA: ENST00000300853.7

ERCC1-202, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC1, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-202ENST00000300853 HERC4Q5GLZ8 1057 aaPredicted RBP12.96□□□□□ -0.33
ERCC1-202ENST00000300853 SPDYE1Q8NFV5 336 aaPredicted RBP12.96□□□□□ -0.33
ERCC1-202ENST00000300853 SNX29Q8TEQ0 813 aa12.96□□□□□ -0.33
ERCC1-202ENST00000300853 LPIN2Q92539 896 aa12.96□□□□□ -0.33
ERCC1-202ENST00000300853 TMOD3Q9NYL9 352 aa12.96□□□□□ -0.33
ERCC1-202ENST00000300853 KAT6BQ8WYB5 2073 aa12.96□□□□□ -0.34
ERCC1-202ENST00000300853 A0A087X0B3 334 aa12.96□□□□□ -0.34
ERCC1-202ENST00000300853 RCCD1A6NED2 376 aa12.96□□□□□ -0.34
ERCC1-202ENST00000300853 SART1O43290 800 aaKnown RBP12.96□□□□□ -0.34
ERCC1-202ENST00000300853 ATP2A2P16615 1042 aaKnown RBP12.96□□□□□ -0.34
ERCC1-202ENST00000300853 ATP2C1P98194 919 aaPredicted RBP12.96□□□□□ -0.34
ERCC1-202ENST00000300853 PSMD2Q13200 908 aa12.96□□□□□ -0.34
ERCC1-202ENST00000300853 KCNB1Q14721 858 aa12.96□□□□□ -0.34
ERCC1-202ENST00000300853 SEL1L2Q5TEA6 688 aa12.96□□□□□ -0.34
ERCC1-202ENST00000300853 ANKRD40Q6AI12 368 aa12.96□□□□□ -0.34
ERCC1-202ENST00000300853 MYOCDQ8IZQ8 938 aa12.96□□□□□ -0.34
ERCC1-202ENST00000300853 STAG2Q8N3U4 1231 aa12.96□□□□□ -0.34
ERCC1-202ENST00000300853 GDAP1Q8TB36 358 aa12.96□□□□□ -0.34
ERCC1-202ENST00000300853 ASIC3Q9UHC3 531 aa12.96□□□□□ -0.34
ERCC1-202ENST00000300853 TRPC6Q9Y210 931 aa12.96□□□□□ -0.34
ERCC1-202ENST00000300853 DLG5Q8TDM6 1919 aa12.96□□□□□ -0.34
ERCC1-202ENST00000300853 PDS5AQ29RF7 1337 aaKnown RBP12.96□□□□□ -0.34
ERCC1-202ENST00000300853 TNNI2P48788 182 aa12.95□□□□□ -0.34
ERCC1-202ENST00000300853 SLC8A3P57103 927 aa12.95□□□□□ -0.34
ERCC1-202ENST00000300853 SEPT2Q15019 361 aa12.95□□□□□ -0.34
ERCC1-202ENST00000300853 RCSD1Q6JBY9 416 aa12.95□□□□□ -0.34
ERCC1-202ENST00000300853 LCORLQ8N3X6 602 aa12.95□□□□□ -0.34
ERCC1-202ENST00000300853 MRRFQ96E11 262 aaKnown RBP12.95□□□□□ -0.34
ERCC1-202ENST00000300853 UIMC1Q96RL1 719 aa12.95□□□□□ -0.34
ERCC1-202ENST00000300853 LEMD3Q9Y2U8 911 aa12.95□□□□□ -0.34
ERCC1-202ENST00000300853 GRID2IPA4D2P6 1211 aa12.95□□□□□ -0.34
ERCC1-202ENST00000300853 CHN1P15882 459 aa12.95□□□□□ -0.34
ERCC1-202ENST00000300853 LRRC14Q15048 493 aa12.95□□□□□ -0.34
ERCC1-202ENST00000300853 NTRK3Q16288 839 aa12.95□□□□□ -0.34
ERCC1-202ENST00000300853 CDC37Q16543 378 aaPredicted RBP12.95□□□□□ -0.34
ERCC1-202ENST00000300853 LRRC23Q53EV4 343 aaPredicted RBP12.95□□□□□ -0.34
ERCC1-202ENST00000300853 NBPF10Q6P3W6 841 aaKnown RBP12.95□□□□□ -0.34
ERCC1-202ENST00000300853 LRIG3Q6UXM1 1119 aa12.95□□□□□ -0.34
ERCC1-202ENST00000300853 TRPM8Q7Z2W7 1104 aa12.95□□□□□ -0.34
ERCC1-202ENST00000300853 TBC1D22AQ8WUA7 517 aa12.95□□□□□ -0.34
ERCC1-202ENST00000300853 MCUR1Q96AQ8 359 aa12.95□□□□□ -0.34
ERCC1-202ENST00000300853 AZI2Q9H6S1 392 aa12.95□□□□□ -0.34
ERCC1-202ENST00000300853 TMBIM4Q9HC24 238 aa12.95□□□□□ -0.34
ERCC1-202ENST00000300853 RASGRF2O14827 1237 aa12.95□□□□□ -0.34
ERCC1-202ENST00000300853 OR52Z1P0C646 297 aa12.95□□□□□ -0.34
ERCC1-202ENST00000300853 TSPY3P0CV98 308 aa12.95□□□□□ -0.34
ERCC1-202ENST00000300853 TSPY8P0CW00 308 aa12.95□□□□□ -0.34
ERCC1-202ENST00000300853 MYBL1P10243 752 aa12.95□□□□□ -0.34
ERCC1-202ENST00000300853 LTKP29376 864 aa12.95□□□□□ -0.34
ERCC1-202ENST00000300853 RANBP1P43487 201 aa12.95□□□□□ -0.34
ERCC1-202ENST00000300853 NONOQ15233 471 aaKnown RBP eCLIP12.95□□□□□ -0.34
ERCC1-202ENST00000300853 KRT28Q7Z3Y7 464 aa12.95□□□□□ -0.34
ERCC1-202ENST00000300853 DZIP1Q86YF9 867 aaKnown RBP12.95□□□□□ -0.34
ERCC1-202ENST00000300853 GBP7Q8N8V2 638 aaPredicted RBP12.95□□□□□ -0.34
ERCC1-202ENST00000300853 DDX23Q9BUQ8 820 aaKnown RBP12.95□□□□□ -0.34
ERCC1-202ENST00000300853 TMX4Q9H1E5 349 aaPredicted RBP12.95□□□□□ -0.34
ERCC1-202ENST00000300853 SNX24Q9Y343 169 aa12.95□□□□□ -0.34
ERCC1-202ENST00000300853 CCDC188H7C350 402 aa12.94□□□□□ -0.34
ERCC1-202ENST00000300853 GNA11P29992 359 aa12.94□□□□□ -0.34
ERCC1-202ENST00000300853 PBX1P40424 430 aa12.94□□□□□ -0.34
ERCC1-202ENST00000300853 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.94□□□□□ -0.34
ERCC1-202ENST00000300853 CCDC65Q8IXS2 484 aa12.94□□□□□ -0.34
ERCC1-202ENST00000300853 MCM9Q9NXL9 1143 aa12.94□□□□□ -0.34
ERCC1-202ENST00000300853 GRIN2DO15399 1336 aa12.94□□□□□ -0.34
ERCC1-202ENST00000300853 OVOS2A0A0G2JMS6 1433 aa12.94□□□□□ -0.34
ERCC1-202ENST00000300853 FCER1AP12319 257 aa12.94□□□□□ -0.34
ERCC1-202ENST00000300853 FOXO4P98177 505 aa12.94□□□□□ -0.34
ERCC1-202ENST00000300853 IKQ13123 557 aaPredicted RBP12.94□□□□□ -0.34
ERCC1-202ENST00000300853 HPS3Q969F9 1004 aa12.94□□□□□ -0.34
ERCC1-202ENST00000300853 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.94□□□□□ -0.34
ERCC1-202ENST00000300853 RASSF10A6NK89 507 aa12.94□□□□□ -0.34
ERCC1-202ENST00000300853 USP17L12C9JPN9 530 aa12.94□□□□□ -0.34
ERCC1-202ENST00000300853 USP17L21D6R901 530 aa12.94□□□□□ -0.34
ERCC1-202ENST00000300853 FGGP02679 453 aa12.94□□□□□ -0.34
ERCC1-202ENST00000300853 MYL1P05976 194 aa12.94□□□□□ -0.34
ERCC1-202ENST00000300853 RASSF2P50749 326 aa12.94□□□□□ -0.34
ERCC1-202ENST00000300853 ARL6IP4Q66PJ3 421 aaKnown RBP12.94□□□□□ -0.34
ERCC1-202ENST00000300853 VPS52Q8N1B4 723 aa12.94□□□□□ -0.34
ERCC1-202ENST00000300853 FBXL16Q8N461 479 aa12.94□□□□□ -0.34
ERCC1-202ENST00000300853 CARD10Q9BWT7 1032 aa12.94□□□□□ -0.34
ERCC1-202ENST00000300853 GREM2Q9H772 168 aa12.94□□□□□ -0.34
ERCC1-202ENST00000300853 ETNK1Q9HBU6 452 aa12.94□□□□□ -0.34
ERCC1-202ENST00000300853 PRDM11Q9NQV5 511 aa12.94□□□□□ -0.34
ERCC1-202ENST00000300853 SCOCQ9UIL1 159 aa12.94□□□□□ -0.34
ERCC1-202ENST00000300853 PHKG2P15735 406 aa12.93□□□□□ -0.34
ERCC1-202ENST00000300853 PRLRP16471 622 aa12.93□□□□□ -0.34
ERCC1-202ENST00000300853 ZNF449Q6P9G9 518 aa12.93□□□□□ -0.34
ERCC1-202ENST00000300853 PLVAPQ9BX97 442 aa12.93□□□□□ -0.34
ERCC1-202ENST00000300853 CEMIPQ8WUJ3 1361 aa12.93□□□□□ -0.34
ERCC1-202ENST00000300853 IGF2BP3O00425 579 aaKnown RBP eCLIP12.93□□□□□ -0.34
ERCC1-202ENST00000300853 SPOPO43791 374 aa12.93□□□□□ -0.34
ERCC1-202ENST00000300853 TNFAIP3P21580 790 aa12.93□□□□□ -0.34
ERCC1-202ENST00000300853 RAD23BP54727 409 aa12.93□□□□□ -0.34
ERCC1-202ENST00000300853 AGBL2Q5U5Z8 902 aa12.93□□□□□ -0.34
ERCC1-202ENST00000300853 PRMT1Q99873 361 aaKnown RBP12.93□□□□□ -0.34
ERCC1-202ENST00000300853 GOLPH3Q9H4A6 298 aa12.93□□□□□ -0.34
ERCC1-202ENST00000300853 CTTNBP2NLQ9P2B4 639 aa12.93□□□□□ -0.34
ERCC1-202ENST00000300853 FBXO3Q9UK99 471 aa12.93□□□□□ -0.34
ERCC1-202ENST00000300853 C15orf41Q9Y2V0 281 aa12.93□□□□□ -0.34
ERCC1-202ENST00000300853 CYP2D7A0A087X1C5 515 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms