RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 TCP11L1Q9NUJ3 509 aa14.33□□□□□ -0.12
TVP23A-201ENST00000299866 PPP1R12AO14974 1030 aaPredicted RBP14.32□□□□□ -0.12
TVP23A-201ENST00000299866 ELF3P78545 371 aaPredicted RBP14.32□□□□□ -0.12
TVP23A-201ENST00000299866 MYO1EQ12965 1108 aa14.32□□□□□ -0.12
TVP23A-201ENST00000299866 MAN2A1Q16706 1144 aa14.32□□□□□ -0.12
TVP23A-201ENST00000299866 ASTE1Q2TB18 679 aaPredicted RBP14.32□□□□□ -0.12
TVP23A-201ENST00000299866 LRIG3Q6UXM1 1119 aa14.32□□□□□ -0.12
TVP23A-201ENST00000299866 DYMQ7RTS9 669 aa14.32□□□□□ -0.12
TVP23A-201ENST00000299866 CCDC84Q86UT8 332 aaPredicted RBP14.32□□□□□ -0.12
TVP23A-201ENST00000299866 LRRC45Q96CN5 670 aa14.32□□□□□ -0.12
TVP23A-201ENST00000299866 ISCUQ9H1K1 167 aa14.32□□□□□ -0.12
TVP23A-201ENST00000299866 PARP4Q9UKK3 1724 aaKnown RBP14.32□□□□□ -0.12
TVP23A-201ENST00000299866 H0YGN5 161 aa14.32□□□□□ -0.12
TVP23A-201ENST00000299866 DDAH1O94760 285 aa14.32□□□□□ -0.12
TVP23A-201ENST00000299866 ATP6V1G2O95670 118 aa14.32□□□□□ -0.12
TVP23A-201ENST00000299866 CALML3P27482 149 aa14.32□□□□□ -0.12
TVP23A-201ENST00000299866 SLC9C1Q4G0N8 1177 aa14.32□□□□□ -0.12
TVP23A-201ENST00000299866 TLDC1Q6P9B6 456 aa14.32□□□□□ -0.12
TVP23A-201ENST00000299866 GIGYF2Q6Y7W6 1299 aaKnown RBP14.32□□□□□ -0.12
TVP23A-201ENST00000299866 DNAAF5Q86Y56 855 aa14.32□□□□□ -0.12
TVP23A-201ENST00000299866 C1orf131Q8NDD1 294 aaKnown RBP14.32□□□□□ -0.12
TVP23A-201ENST00000299866 ZCRB1Q8TBF4 217 aaKnown RBP14.32□□□□□ -0.12
TVP23A-201ENST00000299866 CCSER1Q9C0I3 900 aa14.32□□□□□ -0.12
TVP23A-201ENST00000299866 LRRC4CQ9HCJ2 640 aa14.32□□□□□ -0.12
TVP23A-201ENST00000299866 NFS1Q9Y697 457 aa14.32□□□□□ -0.12
TVP23A-201ENST00000299866 CHD4Q14839 1912 aa14.32□□□□□ -0.12
TVP23A-201ENST00000299866 SRRM3A6NNA2 597 aaPredicted RBP14.31□□□□□ -0.12
TVP23A-201ENST00000299866 MYL1P05976 194 aa14.31□□□□□ -0.12
TVP23A-201ENST00000299866 XRCC4Q13426 336 aa14.31□□□□□ -0.12
TVP23A-201ENST00000299866 HGSNATQ68CP4 663 aa14.31□□□□□ -0.12
TVP23A-201ENST00000299866 TATDN2Q93075 761 aa14.31□□□□□ -0.12
TVP23A-201ENST00000299866 RSRC1Q96IZ7 334 aaKnown RBP14.31□□□□□ -0.12
TVP23A-201ENST00000299866 GRID2IPA4D2P6 1211 aa14.31□□□□□ -0.12
TVP23A-201ENST00000299866 USP17L12C9JPN9 530 aa14.31□□□□□ -0.12
TVP23A-201ENST00000299866 USP17L21D6R901 530 aa14.31□□□□□ -0.12
TVP23A-201ENST00000299866 PDE6BP35913 854 aa14.31□□□□□ -0.12
TVP23A-201ENST00000299866 IFFO1Q0D2I5 559 aa14.31□□□□□ -0.12
TVP23A-201ENST00000299866 LRRC41Q15345 812 aa14.31□□□□□ -0.12
TVP23A-201ENST00000299866 MEI1Q5TIA1 1274 aa14.31□□□□□ -0.12
TVP23A-201ENST00000299866 CCT6BQ92526 530 aa14.31□□□□□ -0.12
TVP23A-201ENST00000299866 DDX47Q9H0S4 455 aaKnown RBP14.31□□□□□ -0.12
TVP23A-201ENST00000299866 KANSL2Q9H9L4 492 aa14.31□□□□□ -0.12
TVP23A-201ENST00000299866 ADAMTS1Q9UHI8 967 aa14.31□□□□□ -0.12
TVP23A-201ENST00000299866 PCDHA4Q9UN74 947 aa14.31□□□□□ -0.12
TVP23A-201ENST00000299866 BIRC3Q13489 604 aa14.31□□□□□ -0.12
TVP23A-201ENST00000299866 NAB2Q15742 525 aa14.31□□□□□ -0.12
TVP23A-201ENST00000299866 SFMBT2Q5VUG0 894 aa14.31□□□□□ -0.12
TVP23A-201ENST00000299866 CNNM4Q6P4Q7 775 aa14.31□□□□□ -0.12
TVP23A-201ENST00000299866 STAG2Q8N3U4 1231 aa14.31□□□□□ -0.12
TVP23A-201ENST00000299866 NSMCE1Q8WV22 266 aa14.31□□□□□ -0.12
TVP23A-201ENST00000299866 IQCDQ96DY2 449 aa14.31□□□□□ -0.12
TVP23A-201ENST00000299866 TRIM31Q9BZY9 425 aa14.31□□□□□ -0.12
TVP23A-201ENST00000299866 L3MBTL1Q9Y468 752 aa14.31□□□□□ -0.12
TVP23A-201ENST00000299866 CAMTA1Q9Y6Y1 1673 aa14.31□□□□□ -0.12
TVP23A-201ENST00000299866 DAPK3O43293 454 aa14.3□□□□□ -0.12
TVP23A-201ENST00000299866 MGRN1O60291 552 aa14.3□□□□□ -0.12
TVP23A-201ENST00000299866 PDE8AO60658 829 aa14.3□□□□□ -0.12
TVP23A-201ENST00000299866 ECHS1P30084 290 aa14.3□□□□□ -0.12
TVP23A-201ENST00000299866 CDC25CP30307 473 aa14.3□□□□□ -0.12
TVP23A-201ENST00000299866 POLR2FP61218 127 aaKnown RBP14.3□□□□□ -0.12
TVP23A-201ENST00000299866 RAPGEF1Q13905 1077 aa14.3□□□□□ -0.12
TVP23A-201ENST00000299866 RPS6KA1Q15418 735 aa14.3□□□□□ -0.12
TVP23A-201ENST00000299866 TBC1D1Q86TI0 1168 aaPredicted RBP14.3□□□□□ -0.12
TVP23A-201ENST00000299866 PROSER2Q86WR7 435 aaPredicted RBP14.3□□□□□ -0.12
TVP23A-201ENST00000299866 DPH5Q9H2P9 285 aa14.3□□□□□ -0.12
TVP23A-201ENST00000299866 NUP188Q5SRE5 1749 aa14.3□□□□□ -0.12
TVP23A-201ENST00000299866 MROH5Q6ZUA9 1318 aa14.3□□□□□ -0.12
TVP23A-201ENST00000299866 CTNND1O60716 968 aaKnown RBP14.3□□□□□ -0.12
TVP23A-201ENST00000299866 DRD4P21917 467 aa14.3□□□□□ -0.12
TVP23A-201ENST00000299866 TECP42680 631 aa14.3□□□□□ -0.12
TVP23A-201ENST00000299866 HEATR3Q7Z4Q2 680 aa14.3□□□□□ -0.12
TVP23A-201ENST00000299866 CCDC63Q8NA47 563 aa14.3□□□□□ -0.12
TVP23A-201ENST00000299866 LUC7LQ9NQ29 371 aaKnown RBP14.3□□□□□ -0.12
TVP23A-201ENST00000299866 ANAPC4Q9UJX5 808 aa14.3□□□□□ -0.12
TVP23A-201ENST00000299866 SSU72P8A0A1W2PR75 194 aa14.3□□□□□ -0.12
TVP23A-201ENST00000299866 TLR2O60603 784 aa14.3□□□□□ -0.12
TVP23A-201ENST00000299866 TRIM37O94972 964 aa14.3□□□□□ -0.12
TVP23A-201ENST00000299866 CCNHP51946 323 aaPredicted RBP14.3□□□□□ -0.12
TVP23A-201ENST00000299866 LETM2Q2VYF4 491 aa14.3□□□□□ -0.12
TVP23A-201ENST00000299866 LACTB2Q53H82 288 aaPredicted RBP14.3□□□□□ -0.12
TVP23A-201ENST00000299866 FAM133BQ5BKY9 247 aaKnown RBP14.3□□□□□ -0.12
TVP23A-201ENST00000299866 MAGEC3Q8TD91 643 aa14.3□□□□□ -0.12
TVP23A-201ENST00000299866 CUL5Q93034 780 aa14.3□□□□□ -0.12
TVP23A-201ENST00000299866 MYH2Q9UKX2 1941 aa14.29□□□□□ -0.12
TVP23A-201ENST00000299866 A0A087X0T9 212 aa14.29□□□□□ -0.12
TVP23A-201ENST00000299866 F8W031 263 aaPredicted RBP14.29□□□□□ -0.12
TVP23A-201ENST00000299866 SART1O43290 800 aaKnown RBP14.29□□□□□ -0.12
TVP23A-201ENST00000299866 RTN2O75298 545 aa14.29□□□□□ -0.12
TVP23A-201ENST00000299866 FAM228BP0C875 321 aa14.29□□□□□ -0.12
TVP23A-201ENST00000299866 GCKP35557 465 aa14.29□□□□□ -0.12
TVP23A-201ENST00000299866 CENPPQ6IPU0 288 aa14.29□□□□□ -0.12
TVP23A-201ENST00000299866 CCDC197Q8NCU1 140 aa14.29□□□□□ -0.12
TVP23A-201ENST00000299866 SELENOSQ9BQE4 189 aa14.29□□□□□ -0.12
TVP23A-201ENST00000299866 LSM14BQ9BX40 385 aaKnown RBP14.29□□□□□ -0.12
TVP23A-201ENST00000299866 SMIM23A6NLE4 172 aa14.29□□□□□ -0.12
TVP23A-201ENST00000299866 CCT8L1PA6NM43 557 aa14.29□□□□□ -0.12
TVP23A-201ENST00000299866 ERVV-2B6SEH9 535 aa14.29□□□□□ -0.12
TVP23A-201ENST00000299866 ORC4O43929 436 aa14.29□□□□□ -0.12
TVP23A-201ENST00000299866 PEX19P40855 299 aa14.29□□□□□ -0.12
TVP23A-201ENST00000299866 DHX9Q08211 1270 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms