RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 PI4KBQ9UBF8 816 aa11.22□□□□□ -0.61
FOXN4-201ENST00000299162 SUFUQ9UMX1 484 aa11.22□□□□□ -0.61
FOXN4-201ENST00000299162 TRAF5O00463 557 aa11.21□□□□□ -0.61
FOXN4-201ENST00000299162 HERC4Q5GLZ8 1057 aaPredicted RBP11.21□□□□□ -0.61
FOXN4-201ENST00000299162 TTI2Q6NXR4 508 aa11.21□□□□□ -0.61
FOXN4-201ENST00000299162 PODNQ7Z5L7 613 aa11.21□□□□□ -0.61
FOXN4-201ENST00000299162 ACER1Q8TDN7 264 aa11.21□□□□□ -0.61
FOXN4-201ENST00000299162 RAB34Q9BZG1 259 aa11.21□□□□□ -0.61
FOXN4-201ENST00000299162 SEMA6BQ9H3T3 888 aa11.21□□□□□ -0.61
FOXN4-201ENST00000299162 BMP2KQ9NSY1 1161 aaPredicted RBP11.21□□□□□ -0.61
FOXN4-201ENST00000299162 FAM53CQ9NYF3 392 aa11.21□□□□□ -0.61
FOXN4-201ENST00000299162 LIMA1Q9UHB6 759 aaKnown RBP11.21□□□□□ -0.61
FOXN4-201ENST00000299162 DUSP10Q9Y6W6 482 aa11.21□□□□□ -0.61
FOXN4-201ENST00000299162 MYO1BO43795 1136 aa11.21□□□□□ -0.62
FOXN4-201ENST00000299162 EDIL3O43854 480 aa11.21□□□□□ -0.62
FOXN4-201ENST00000299162 SRGAP2O75044 1071 aa11.21□□□□□ -0.62
FOXN4-201ENST00000299162 RHOBTB3O94955 611 aa11.21□□□□□ -0.62
FOXN4-201ENST00000299162 NDUFB10O96000 172 aa11.21□□□□□ -0.62
FOXN4-201ENST00000299162 MRPS25P82663 173 aaKnown RBP11.21□□□□□ -0.62
FOXN4-201ENST00000299162 TBC1D10BQ4KMP7 808 aaPredicted RBP11.21□□□□□ -0.62
FOXN4-201ENST00000299162 MICALL1Q8N3F8 863 aa11.21□□□□□ -0.62
FOXN4-201ENST00000299162 LARGE2Q8N3Y3 721 aa11.21□□□□□ -0.62
FOXN4-201ENST00000299162 PANX2Q96RD6 677 aa11.21□□□□□ -0.62
FOXN4-201ENST00000299162 CXorf56Q9H5V9 222 aa11.21□□□□□ -0.62
FOXN4-201ENST00000299162 L2HGDHQ9H9P8 463 aa11.21□□□□□ -0.62
FOXN4-201ENST00000299162 NHSQ6T4R5 1651 aa11.21□□□□□ -0.62
FOXN4-201ENST00000299162 DDX39AO00148 427 aaKnown RBP11.2□□□□□ -0.62
FOXN4-201ENST00000299162 RRP1BQ14684 758 aaKnown RBP11.2□□□□□ -0.62
FOXN4-201ENST00000299162 PTPROQ16827 1216 aa11.2□□□□□ -0.62
FOXN4-201ENST00000299162 DACT2Q5SW24 774 aa11.2□□□□□ -0.62
FOXN4-201ENST00000299162 MAEAQ7L5Y9 396 aa11.2□□□□□ -0.62
FOXN4-201ENST00000299162 DEFB132Q7Z7B7 95 aa11.2□□□□□ -0.62
FOXN4-201ENST00000299162 SRLQ86TD4 932 aa11.2□□□□□ -0.62
FOXN4-201ENST00000299162 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.2□□□□□ -0.62
FOXN4-201ENST00000299162 DONSONQ9NYP3 566 aa11.2□□□□□ -0.62
FOXN4-201ENST00000299162 CCDC189A1A4V9 331 aa11.2□□□□□ -0.62
FOXN4-201ENST00000299162 SPDYE3A6NKU9 549 aa11.2□□□□□ -0.62
FOXN4-201ENST00000299162 ZRANB2O95218 330 aaKnown RBP eCLIP11.2□□□□□ -0.62
FOXN4-201ENST00000299162 NAP1L1P55209 391 aaKnown RBP11.2□□□□□ -0.62
FOXN4-201ENST00000299162 CCDC40Q4G0X9 1142 aa11.2□□□□□ -0.62
FOXN4-201ENST00000299162 CYP26C1Q6V0L0 522 aa11.2□□□□□ -0.62
FOXN4-201ENST00000299162 HAS1Q92839 578 aa11.2□□□□□ -0.62
FOXN4-201ENST00000299162 ANO3Q9BYT9 981 aa11.2□□□□□ -0.62
FOXN4-201ENST00000299162 DEF6Q9H4E7 631 aa11.2□□□□□ -0.62
FOXN4-201ENST00000299162 HOMER2Q9NSB8 354 aa11.2□□□□□ -0.62
FOXN4-201ENST00000299162 SWAP70Q9UH65 585 aa11.2□□□□□ -0.62
FOXN4-201ENST00000299162 TAF1LQ8IZX4 1826 aa11.2□□□□□ -0.62
FOXN4-201ENST00000299162 A0A1W2PRG0 241 aa11.2□□□□□ -0.62
FOXN4-201ENST00000299162 LGALS16A8MUM7 142 aa11.2□□□□□ -0.62
FOXN4-201ENST00000299162 LAD1O00515 517 aa11.2□□□□□ -0.62
FOXN4-201ENST00000299162 CCNE1P24864 410 aa11.2□□□□□ -0.62
FOXN4-201ENST00000299162 PBX1P40424 430 aa11.2□□□□□ -0.62
FOXN4-201ENST00000299162 PLS1Q14651 629 aa11.2□□□□□ -0.62
FOXN4-201ENST00000299162 KCTD19Q17RG1 926 aaPredicted RBP11.2□□□□□ -0.62
FOXN4-201ENST00000299162 CCDC122Q5T0U0 273 aa11.2□□□□□ -0.62
FOXN4-201ENST00000299162 GPATCH4Q5T3I0 446 aaKnown RBP11.2□□□□□ -0.62
FOXN4-201ENST00000299162 CNNM4Q6P4Q7 775 aa11.2□□□□□ -0.62
FOXN4-201ENST00000299162 PACS2Q86VP3 889 aa11.2□□□□□ -0.62
FOXN4-201ENST00000299162 GPBP1Q86WP2 473 aa11.2□□□□□ -0.62
FOXN4-201ENST00000299162 OR8K1Q8NGG5 319 aa11.2□□□□□ -0.62
FOXN4-201ENST00000299162 AKT1S1Q96B36 256 aa11.2□□□□□ -0.62
FOXN4-201ENST00000299162 AK8Q96MA6 479 aa11.2□□□□□ -0.62
FOXN4-201ENST00000299162 SH2D3AQ9BRG2 576 aa11.2□□□□□ -0.62
FOXN4-201ENST00000299162 RIC8AQ9NPQ8 531 aa11.2□□□□□ -0.62
FOXN4-201ENST00000299162 EPN1Q9Y6I3 576 aaPredicted RBP11.2□□□□□ -0.62
FOXN4-201ENST00000299162 MYH1P12882 1939 aa11.2□□□□□ -0.62
FOXN4-201ENST00000299162 PHLPP2Q6ZVD8 1323 aa11.2□□□□□ -0.62
FOXN4-201ENST00000299162 EFCAB8A8MWE9 144 aa11.19□□□□□ -0.62
FOXN4-201ENST00000299162 EPHB6O15197 1021 aa11.19□□□□□ -0.62
FOXN4-201ENST00000299162 IPO7O95373 1038 aaKnown RBP11.19□□□□□ -0.62
FOXN4-201ENST00000299162 PSMC6P62333 389 aa11.19□□□□□ -0.62
FOXN4-201ENST00000299162 DGKZQ13574 1117 aa11.19□□□□□ -0.62
FOXN4-201ENST00000299162 HHIPL2Q6UWX4 724 aa11.19□□□□□ -0.62
FOXN4-201ENST00000299162 P2RX7Q99572 595 aaKnown RBP11.19□□□□□ -0.62
FOXN4-201ENST00000299162 FBXO28Q9NVF7 368 aa11.19□□□□□ -0.62
FOXN4-201ENST00000299162 ZNHIT6Q9NWK9 470 aaKnown RBP11.19□□□□□ -0.62
FOXN4-201ENST00000299162 NAV1Q8NEY1 1877 aa11.19□□□□□ -0.62
FOXN4-201ENST00000299162 YDJCA8MPS7 323 aa11.19□□□□□ -0.62
FOXN4-201ENST00000299162 ACTN2P35609 894 aa11.19□□□□□ -0.62
FOXN4-201ENST00000299162 PRPHP41219 470 aa11.19□□□□□ -0.62
FOXN4-201ENST00000299162 TDRD12Q587J7 1177 aaKnown RBP11.19□□□□□ -0.62
FOXN4-201ENST00000299162 PIGOQ8TEQ8 1089 aa11.19□□□□□ -0.62
FOXN4-201ENST00000299162 ZDHHC15Q96MV8 337 aa11.19□□□□□ -0.62
FOXN4-201ENST00000299162 MTMR9Q96QG7 549 aa11.19□□□□□ -0.62
FOXN4-201ENST00000299162 TMEM39BQ9GZU3 492 aa11.19□□□□□ -0.62
FOXN4-201ENST00000299162 PANK4Q9NVE7 773 aa11.19□□□□□ -0.62
FOXN4-201ENST00000299162 MYH8P13535 1937 aa11.19□□□□□ -0.62
FOXN4-201ENST00000299162 DDX60LQ5H9U9 1706 aaKnown RBP11.19□□□□□ -0.62
FOXN4-201ENST00000299162 SBF2Q86WG5 1849 aa11.19□□□□□ -0.62
FOXN4-201ENST00000299162 SHTN1A0MZ66 631 aa11.19□□□□□ -0.62
FOXN4-201ENST00000299162 KLRG2A4D1S0 409 aaPredicted RBP11.19□□□□□ -0.62
FOXN4-201ENST00000299162 NDUFA10O95299 355 aa11.19□□□□□ -0.62
FOXN4-201ENST00000299162 CCDC93Q567U6 631 aa11.19□□□□□ -0.62
FOXN4-201ENST00000299162 FAM83BQ5T0W9 1011 aa11.19□□□□□ -0.62
FOXN4-201ENST00000299162 RRAGAQ7L523 313 aa11.19□□□□□ -0.62
FOXN4-201ENST00000299162 TMTC1Q8IUR5 882 aa11.19□□□□□ -0.62
FOXN4-201ENST00000299162 CPXCR1Q8N123 301 aa11.19□□□□□ -0.62
FOXN4-201ENST00000299162 RAD54LQ92698 747 aa11.19□□□□□ -0.62
FOXN4-201ENST00000299162 PLCD4Q9BRC7 762 aa11.19□□□□□ -0.62
FOXN4-201ENST00000299162 IKZF4Q9H2S9 585 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms