RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 TPD52L1Q16890 204 aaPredicted RBP28.7■■■□□ 2.18
SDCCAG3-201ENST00000298537 CREBRFQ8IUR6 639 aa28.7■■■□□ 2.18
SDCCAG3-201ENST00000298537 PHIPQ8WWQ0 1821 aa28.7■■■□□ 2.18
SDCCAG3-201ENST00000298537 TBX3O15119 743 aa28.69■■■□□ 2.18
SDCCAG3-201ENST00000298537 IDEP14735 1019 aa28.69■■■□□ 2.18
SDCCAG3-201ENST00000298537 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.69■■■□□ 2.18
SDCCAG3-201ENST00000298537 VWA5AO00534 786 aa28.69■■■□□ 2.18
SDCCAG3-201ENST00000298537 AS3MTQ9HBK9 375 aa28.69■■■□□ 2.18
SDCCAG3-201ENST00000298537 IMPACTQ9P2X3 320 aa28.69■■■□□ 2.18
SDCCAG3-201ENST00000298537 NR1I3Q14994 352 aa28.68■■■□□ 2.18
SDCCAG3-201ENST00000298537 IRF2BP1Q8IU81 584 aa28.68■■■□□ 2.18
SDCCAG3-201ENST00000298537 RGL1Q9NZL6 768 aa28.68■■■□□ 2.18
SDCCAG3-201ENST00000298537 CHMP2AO43633 222 aa28.68■■■□□ 2.18
SDCCAG3-201ENST00000298537 VGLL4Q14135 290 aa28.68■■■□□ 2.18
SDCCAG3-201ENST00000298537 DNAJC19Q96DA6 116 aa28.68■■■□□ 2.18
SDCCAG3-201ENST00000298537 FAM20AQ96MK3 541 aa28.68■■■□□ 2.18
SDCCAG3-201ENST00000298537 PPP2R3BQ9Y5P8 575 aa28.68■■■□□ 2.18
SDCCAG3-201ENST00000298537 A0A1B0GTH6 734 aa28.67■■■□□ 2.18
SDCCAG3-201ENST00000298537 SKILP12757 684 aa28.67■■■□□ 2.18
SDCCAG3-201ENST00000298537 SUPT20HL1Q3ZLR7 823 aa28.67■■■□□ 2.18
SDCCAG3-201ENST00000298537 CEP55Q53EZ4 464 aa28.67■■■□□ 2.18
SDCCAG3-201ENST00000298537 SNCAIPQ9Y6H5 919 aa28.67■■■□□ 2.18
SDCCAG3-201ENST00000298537 PEX10O60683 326 aa28.66■■■□□ 2.18
SDCCAG3-201ENST00000298537 PLA2G4BP0C869 781 aa28.66■■■□□ 2.18
SDCCAG3-201ENST00000298537 MOB2Q70IA6 237 aa28.66■■■□□ 2.18
SDCCAG3-201ENST00000298537 UNC13DQ70J99 1090 aa28.66■■■□□ 2.18
SDCCAG3-201ENST00000298537 PKD2L1Q9P0L9 805 aa28.66■■■□□ 2.18
SDCCAG3-201ENST00000298537 AFG3L2Q9Y4W6 797 aa28.66■■■□□ 2.18
SDCCAG3-201ENST00000298537 ITGB5P18084 799 aa28.66■■■□□ 2.18
SDCCAG3-201ENST00000298537 KRT31Q15323 416 aa28.66■■■□□ 2.18
SDCCAG3-201ENST00000298537 FGFBP2Q9BYJ0 223 aa28.66■■■□□ 2.18
SDCCAG3-201ENST00000298537 ADD3Q9UEY8 706 aaKnown RBP28.66■■■□□ 2.18
SDCCAG3-201ENST00000298537 PARP14Q460N5 1801 aa28.66■■■□□ 2.18
SDCCAG3-201ENST00000298537 RLFQ13129 1914 aa28.65■■■□□ 2.18
SDCCAG3-201ENST00000298537 KDM3AQ9Y4C1 1321 aa28.65■■■□□ 2.18
SDCCAG3-201ENST00000298537 RPS6P62753 249 aaKnown RBP28.65■■■□□ 2.18
SDCCAG3-201ENST00000298537 LRRC41Q15345 812 aa28.65■■■□□ 2.18
SDCCAG3-201ENST00000298537 TTI2Q6NXR4 508 aa28.65■■■□□ 2.18
SDCCAG3-201ENST00000298537 SYTL5Q8TDW5 730 aaPredicted RBP28.65■■■□□ 2.18
SDCCAG3-201ENST00000298537 TAAR1Q96RJ0 339 aa28.65■■■□□ 2.18
SDCCAG3-201ENST00000298537 DUSP9Q99956 384 aaKnown RBP28.65■■■□□ 2.18
SDCCAG3-201ENST00000298537 NT5C3AQ9H0P0 336 aa28.65■■■□□ 2.18
SDCCAG3-201ENST00000298537 NKRFO15226 690 aaKnown RBP eCLIP28.65■■■□□ 2.18
SDCCAG3-201ENST00000298537 ANKRD40Q6AI12 368 aa28.65■■■□□ 2.18
SDCCAG3-201ENST00000298537 OTOP1Q7RTM1 612 aa28.65■■■□□ 2.18
SDCCAG3-201ENST00000298537 DCPSQ96C86 337 aaKnown RBP28.65■■■□□ 2.18
SDCCAG3-201ENST00000298537 TRERF1Q96PN7 1200 aa28.65■■■□□ 2.18
SDCCAG3-201ENST00000298537 POLD4Q9HCU8 107 aa28.65■■■□□ 2.18
SDCCAG3-201ENST00000298537 PSMD10O75832 226 aa28.64■■■□□ 2.18
SDCCAG3-201ENST00000298537 REPS2Q8NFH8 660 aa28.64■■■□□ 2.18
SDCCAG3-201ENST00000298537 SPTLC3Q9NUV7 552 aa28.64■■■□□ 2.18
SDCCAG3-201ENST00000298537 TAB2Q9NYJ8 693 aa28.64■■■□□ 2.18
SDCCAG3-201ENST00000298537 PITPNM2Q9BZ72 1349 aa28.64■■■□□ 2.18
SDCCAG3-201ENST00000298537 ZBED4O75132 1171 aa28.64■■■□□ 2.17
SDCCAG3-201ENST00000298537 OFD1O75665 1012 aa28.64■■■□□ 2.17
SDCCAG3-201ENST00000298537 GSDMDP57764 484 aa28.64■■■□□ 2.17
SDCCAG3-201ENST00000298537 PABPC4Q13310 644 aaKnown RBP eCLIP28.64■■■□□ 2.171e-6■■■□□ 19.1
SDCCAG3-201ENST00000298537 ARSHQ5FYA8 562 aa28.64■■■□□ 2.17
SDCCAG3-201ENST00000298537 LRCH2Q5VUJ6 765 aa28.64■■■□□ 2.17
SDCCAG3-201ENST00000298537 EIF2AK1Q9BQI3 630 aaKnown RBP28.64■■■□□ 2.17
SDCCAG3-201ENST00000298537 VPS16Q9H269 839 aa28.64■■■□□ 2.17
SDCCAG3-201ENST00000298537 BCAS3Q9H6U6 928 aa28.64■■■□□ 2.17
SDCCAG3-201ENST00000298537 TBC1D7Q9P0N9 293 aa28.64■■■□□ 2.17
SDCCAG3-201ENST00000298537 CTDP1Q9Y5B0 961 aaPredicted RBP28.64■■■□□ 2.17
SDCCAG3-201ENST00000298537 USP27XA6NNY8 438 aa28.63■■■□□ 2.17
SDCCAG3-201ENST00000298537 PSMA7O14818 248 aa28.63■■■□□ 2.17
SDCCAG3-201ENST00000298537 CTTNQ14247 550 aaKnown RBP28.63■■■□□ 2.17
SDCCAG3-201ENST00000298537 NOL9Q5SY16 702 aaKnown RBP28.63■■■□□ 2.17
SDCCAG3-201ENST00000298537 GPBP1Q86WP2 473 aa28.63■■■□□ 2.17
SDCCAG3-201ENST00000298537 SULF1Q8IWU6 871 aa28.63■■■□□ 2.17
SDCCAG3-201ENST00000298537 C12orf42Q96LP6 360 aa28.63■■■□□ 2.17
SDCCAG3-201ENST00000298537 SRRTQ9BXP5 876 aaKnown RBP28.63■■■□□ 2.17
SDCCAG3-201ENST00000298537 WDR11Q9BZH6 1224 aa28.63■■■□□ 2.17
SDCCAG3-201ENST00000298537 SEMA6BQ9H3T3 888 aa28.63■■■□□ 2.17
SDCCAG3-201ENST00000298537 RPTORQ8N122 1335 aa28.63■■■□□ 2.17
SDCCAG3-201ENST00000298537 KCNJ18B7U540 433 aa28.63■■■□□ 2.17
SDCCAG3-201ENST00000298537 CYP11B2P19099 503 aa28.63■■■□□ 2.17
SDCCAG3-201ENST00000298537 EIF2AK2P19525 551 aaKnown RBP28.63■■■□□ 2.17
SDCCAG3-201ENST00000298537 RPA1P27694 616 aa28.63■■■□□ 2.17
SDCCAG3-201ENST00000298537 SLC12A3P55017 1021 aa28.63■■■□□ 2.17
SDCCAG3-201ENST00000298537 EHHADHQ08426 723 aa28.63■■■□□ 2.17
SDCCAG3-201ENST00000298537 KCNJ12Q14500 433 aa28.63■■■□□ 2.17
SDCCAG3-201ENST00000298537 TCP11X2Q5H9J9 407 aa28.63■■■□□ 2.17
SDCCAG3-201ENST00000298537 NSMFQ6X4W1 530 aa28.63■■■□□ 2.17
SDCCAG3-201ENST00000298537 SLC5A5Q92911 643 aa28.63■■■□□ 2.17
SDCCAG3-201ENST00000298537 TRIM47Q96LD4 638 aa28.63■■■□□ 2.17
SDCCAG3-201ENST00000298537 COL11A1P12107 1806 aaPredicted RBP28.62■■■□□ 2.17
SDCCAG3-201ENST00000298537 ZBTB39O15060 712 aa28.62■■■□□ 2.17
SDCCAG3-201ENST00000298537 MRPS9P82933 396 aaKnown RBP28.62■■■□□ 2.17
SDCCAG3-201ENST00000298537 HAUS3Q68CZ6 603 aa28.62■■■□□ 2.17
SDCCAG3-201ENST00000298537 CNNM4Q6P4Q7 775 aa28.62■■■□□ 2.17
SDCCAG3-201ENST00000298537 KRT26Q7Z3Y9 468 aa28.62■■■□□ 2.17
SDCCAG3-201ENST00000298537 PVALEFA0A1B0GWK0 134 aa28.61■■■□□ 2.17
SDCCAG3-201ENST00000298537 DDX39AO00148 427 aaKnown RBP28.61■■■□□ 2.17
SDCCAG3-201ENST00000298537 SFPQP23246 707 aaKnown RBP eCLIP28.61■■■□□ 2.17
SDCCAG3-201ENST00000298537 DSG3P32926 999 aa28.61■■■□□ 2.17
SDCCAG3-201ENST00000298537 COASYQ13057 564 aa28.61■■■□□ 2.17
SDCCAG3-201ENST00000298537 TBX2Q13207 712 aaPredicted RBP28.61■■■□□ 2.17
SDCCAG3-201ENST00000298537 CEP135Q66GS9 1140 aa28.61■■■□□ 2.17
SDCCAG3-201ENST00000298537 P2RX5Q93086 422 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms