RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 ADAM9Q13443 819 aa13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 FAM153CQ494X1 144 aa13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 PEX26Q7Z412 305 aa13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 CCDC91Q7Z6B0 441 aa13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 DAAM2Q86T65 1068 aa13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 CCDC65Q8IXS2 484 aa13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 ARFGAP2Q8N6H7 521 aa13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 GLIS3Q8NEA6 775 aa13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 FAM153AQ9UHL3 310 aa13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 TMEM110-MUSTN1A8MSY1 372 aa13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 AGPSO00116 658 aa13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 KRIT1O00522 736 aa13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 MYCNP04198 464 aaPredicted RBP13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 FAM98CQ17RN3 349 aaKnown RBP13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 HAUS3Q68CZ6 603 aa13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 GPBP1Q86WP2 473 aa13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 ZSCAN29Q8IWY8 852 aaPredicted RBP13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 KIAA0895Q8NCT3 520 aa13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 LRRC27Q9C0I9 530 aa13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 NWD2Q9ULI1 1742 aa13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 PCDHA12Q9UN75 941 aa13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 COL4A3BPQ9Y5P4 624 aa13.84□□□□□ -0.19
TMEM200A-201ENST00000296978 STXBP3O00186 592 aa13.83□□□□□ -0.2
TMEM200A-201ENST00000296978 CLGNO14967 610 aa13.83□□□□□ -0.2
TMEM200A-201ENST00000296978 NTSR2O95665 410 aa13.83□□□□□ -0.2
TMEM200A-201ENST00000296978 SLC16A2P36021 539 aa13.83□□□□□ -0.2
TMEM200A-201ENST00000296978 ZNF76P36508 570 aa13.83□□□□□ -0.2
TMEM200A-201ENST00000296978 MEA1Q16626 185 aa13.83□□□□□ -0.2
TMEM200A-201ENST00000296978 TMED8Q6PL24 325 aaPredicted RBP13.83□□□□□ -0.2
TMEM200A-201ENST00000296978 TXNRD3Q86VQ6 643 aa13.83□□□□□ -0.2
TMEM200A-201ENST00000296978 CLEC10AQ8IUN9 316 aa13.83□□□□□ -0.2
TMEM200A-201ENST00000296978 MMGT1Q8N4V1 131 aa13.83□□□□□ -0.2
TMEM200A-201ENST00000296978 RNPC3Q96LT9 517 aaKnown RBP13.83□□□□□ -0.2
TMEM200A-201ENST00000296978 DDX47Q9H0S4 455 aaKnown RBP13.83□□□□□ -0.2
TMEM200A-201ENST00000296978 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.83□□□□□ -0.2
TMEM200A-201ENST00000296978 CAMTA2O94983 1202 aa13.83□□□□□ -0.2
TMEM200A-201ENST00000296978 KLRC1P26715 233 aa13.83□□□□□ -0.2
TMEM200A-201ENST00000296978 ERGIC2Q96RQ1 377 aa13.83□□□□□ -0.2
TMEM200A-201ENST00000296978 ANKRD2Q9GZV1 360 aa13.83□□□□□ -0.2
TMEM200A-201ENST00000296978 SRP68Q9UHB9 627 aaKnown RBP13.83□□□□□ -0.2
TMEM200A-201ENST00000296978 TSKSQ9UJT2 592 aa13.83□□□□□ -0.2
TMEM200A-201ENST00000296978 PCDHB13Q9Y5F0 798 aa13.83□□□□□ -0.2
TMEM200A-201ENST00000296978 MAP2K2P36507 400 aa13.82□□□□□ -0.2
TMEM200A-201ENST00000296978 GSTO1P78417 241 aa13.82□□□□□ -0.2
TMEM200A-201ENST00000296978 GRM4Q14833 912 aa13.82□□□□□ -0.2
TMEM200A-201ENST00000296978 LLGL1Q15334 1064 aa13.82□□□□□ -0.2
TMEM200A-201ENST00000296978 MCTP2Q6DN12 878 aa13.82□□□□□ -0.2
TMEM200A-201ENST00000296978 GALNT17Q6IS24 598 aa13.82□□□□□ -0.2
TMEM200A-201ENST00000296978 RCSD1Q6JBY9 416 aa13.82□□□□□ -0.2
TMEM200A-201ENST00000296978 TPTE2Q6XPS3 522 aa13.82□□□□□ -0.2
TMEM200A-201ENST00000296978 UNC13DQ70J99 1090 aa13.82□□□□□ -0.2
TMEM200A-201ENST00000296978 DYDC1Q8WWB3 177 aa13.82□□□□□ -0.2
TMEM200A-201ENST00000296978 NCAPGQ9BPX3 1015 aa13.82□□□□□ -0.2
TMEM200A-201ENST00000296978 IL17RBQ9NRM6 502 aa13.82□□□□□ -0.2
TMEM200A-201ENST00000296978 USP17L5A8MUK1 530 aa13.82□□□□□ -0.2
TMEM200A-201ENST00000296978 CYTH3O43739 400 aa13.82□□□□□ -0.2
TMEM200A-201ENST00000296978 AENQ8WTP8 325 aaKnown RBP13.82□□□□□ -0.2
TMEM200A-201ENST00000296978 U2AF1L4Q8WU68 220 aaKnown RBP13.82□□□□□ -0.2
TMEM200A-201ENST00000296978 MAGEF1Q9HAY2 307 aa13.82□□□□□ -0.2
TMEM200A-201ENST00000296978 SH3GLB2Q9NR46 395 aa13.82□□□□□ -0.2
TMEM200A-201ENST00000296978 BTDP43251 543 aa13.82□□□□□ -0.2
TMEM200A-201ENST00000296978 SF3B2Q13435 895 aaKnown RBP13.82□□□□□ -0.2
TMEM200A-201ENST00000296978 C12orf60Q5U649 245 aa13.82□□□□□ -0.2
TMEM200A-201ENST00000296978 PDXDC1Q6P996 788 aa13.82□□□□□ -0.2
TMEM200A-201ENST00000296978 PACSIN1Q9BY11 444 aa13.82□□□□□ -0.2
TMEM200A-201ENST00000296978 MAD2L2Q9UI95 211 aa13.82□□□□□ -0.2
TMEM200A-201ENST00000296978 E9PMD0 336 aa13.81□□□□□ -0.2
TMEM200A-201ENST00000296978 MEIS1O00470 390 aa13.81□□□□□ -0.2
TMEM200A-201ENST00000296978 PLS1Q14651 629 aa13.81□□□□□ -0.2
TMEM200A-201ENST00000296978 TRADDQ15628 312 aa13.81□□□□□ -0.2
TMEM200A-201ENST00000296978 IFI16Q16666 785 aaKnown RBP13.81□□□□□ -0.2
TMEM200A-201ENST00000296978 CCDC25Q86WR0 208 aa13.81□□□□□ -0.2
TMEM200A-201ENST00000296978 TLR10Q9BXR5 811 aa13.81□□□□□ -0.2
TMEM200A-201ENST00000296978 NOVA2Q9UNW9 492 aaKnown RBP13.81□□□□□ -0.2
TMEM200A-201ENST00000296978 NPHP3-ACAD11A0A0J9YXS1 232 aa13.81□□□□□ -0.2
TMEM200A-201ENST00000296978 GNPATO15228 680 aa13.81□□□□□ -0.2
TMEM200A-201ENST00000296978 NR2F2P24468 414 aa13.81□□□□□ -0.2
TMEM200A-201ENST00000296978 LSP1P33241 339 aa13.81□□□□□ -0.2
TMEM200A-201ENST00000296978 TTMPQ5BVD1 217 aa13.81□□□□□ -0.2
TMEM200A-201ENST00000296978 MIIPQ5JXC2 388 aa13.81□□□□□ -0.2
TMEM200A-201ENST00000296978 C4orf32Q8N8J7 132 aa13.81□□□□□ -0.2
TMEM200A-201ENST00000296978 LRRC45Q96CN5 670 aa13.81□□□□□ -0.2
TMEM200A-201ENST00000296978 C7orf25Q9BPX7 421 aa13.81□□□□□ -0.2
TMEM200A-201ENST00000296978 DDX25Q9UHL0 483 aaKnown RBP13.81□□□□□ -0.2
TMEM200A-201ENST00000296978 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.81□□□□□ -0.2
TMEM200A-201ENST00000296978 KCNQ2O43526 872 aa13.81□□□□□ -0.2
TMEM200A-201ENST00000296978 SERPING1P05155 500 aa13.81□□□□□ -0.2
TMEM200A-201ENST00000296978 ACTN1P12814 892 aa13.81□□□□□ -0.2
TMEM200A-201ENST00000296978 HNRNPH1P31943 449 aaKnown RBP13.81□□□□□ -0.2
TMEM200A-201ENST00000296978 ITPK1Q13572 414 aa13.81□□□□□ -0.2
TMEM200A-201ENST00000296978 WDR66Q8TBY9 1149 aa13.81□□□□□ -0.2
TMEM200A-201ENST00000296978 CEP95Q96GE4 821 aa13.81□□□□□ -0.2
TMEM200A-201ENST00000296978 SALL4Q9UJQ4 1053 aa13.81□□□□□ -0.2
TMEM200A-201ENST00000296978 MYO5AQ9Y4I1 1855 aaKnown RBP13.8□□□□□ -0.2
TMEM200A-201ENST00000296978 RPS6KA5O75582 802 aa13.8□□□□□ -0.2
TMEM200A-201ENST00000296978 FECHP22830 423 aa13.8□□□□□ -0.2
TMEM200A-201ENST00000296978 TMOD1P28289 359 aa13.8□□□□□ -0.2
TMEM200A-201ENST00000296978 CDK8P49336 464 aa13.8□□□□□ -0.2
TMEM200A-201ENST00000296978 CYP4A11Q02928 519 aa13.8□□□□□ -0.2
TMEM200A-201ENST00000296978 ACTN3Q08043 901 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms