RNA–Protein interactions for RNA: ENST00000296783.7

PAPD4-201, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

APPRIS P3 TSL 2 BASIC

Gene PAPD4, Length 3,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-201ENST00000296783 CDK17Q00537 523 aa11.66□□□□□ -0.54
PAPD4-201ENST00000296783 KIF4BQ2VIQ3 1234 aa11.66□□□□□ -0.54
PAPD4-201ENST00000296783 FKBP15Q5T1M5 1219 aa11.66□□□□□ -0.54
PAPD4-201ENST00000296783 SYDE2Q5VT97 1194 aa11.66□□□□□ -0.54
PAPD4-201ENST00000296783 BTNL9Q6UXG8 535 aa11.66□□□□□ -0.54
PAPD4-201ENST00000296783 KRT222Q8N1A0 295 aa11.66□□□□□ -0.54
PAPD4-201ENST00000296783 CSRNP1Q96S65 589 aa11.66□□□□□ -0.54
PAPD4-201ENST00000296783 HAUS4Q9H6D7 363 aa11.66□□□□□ -0.54
PAPD4-201ENST00000296783 NHEJ1Q9H9Q4 299 aaPredicted RBP11.66□□□□□ -0.54
PAPD4-201ENST00000296783 PANK4Q9NVE7 773 aa11.66□□□□□ -0.54
PAPD4-201ENST00000296783 FAM86B1E9PN63 330 aa11.66□□□□□ -0.54
PAPD4-201ENST00000296783 FAM86B2P0C5J1 330 aa11.66□□□□□ -0.54
PAPD4-201ENST00000296783 PLA2G4BP0C869 781 aa11.66□□□□□ -0.54
PAPD4-201ENST00000296783 CHMP4BP1P59074 171 aa11.66□□□□□ -0.54
PAPD4-201ENST00000296783 TUBB2AQ13885 445 aa11.66□□□□□ -0.54
PAPD4-201ENST00000296783 TSR1Q2NL82 804 aaKnown RBP11.66□□□□□ -0.54
PAPD4-201ENST00000296783 USH1GQ495M9 461 aa11.66□□□□□ -0.54
PAPD4-201ENST00000296783 Q4G0T1 1027 aa11.66□□□□□ -0.54
PAPD4-201ENST00000296783 FBXO11Q86XK2 927 aa11.66□□□□□ -0.54
PAPD4-201ENST00000296783 MYOCDQ8IZQ8 938 aa11.66□□□□□ -0.54
PAPD4-201ENST00000296783 TUBB2BQ9BVA1 445 aa11.66□□□□□ -0.54
PAPD4-201ENST00000296783 ARGLU1Q9NWB6 273 aaPredicted RBP11.66□□□□□ -0.54
PAPD4-201ENST00000296783 GUCA1BQ9UMX6 200 aa11.66□□□□□ -0.54
PAPD4-201ENST00000296783 RCCD1A6NED2 376 aa11.65□□□□□ -0.54
PAPD4-201ENST00000296783 BMP3P12645 472 aa11.65□□□□□ -0.54
PAPD4-201ENST00000296783 CYP11B2P19099 503 aa11.65□□□□□ -0.54
PAPD4-201ENST00000296783 HNRNPH3P31942 346 aaKnown RBP11.65□□□□□ -0.54
PAPD4-201ENST00000296783 SREBF1P36956 1147 aa11.65□□□□□ -0.54
PAPD4-201ENST00000296783 SLC12A3P55017 1021 aa11.65□□□□□ -0.54
PAPD4-201ENST00000296783 FAM26FQ5R3K3 315 aa11.65□□□□□ -0.54
PAPD4-201ENST00000296783 RBM26Q5T8P6 1007 aaKnown RBP11.65□□□□□ -0.54
PAPD4-201ENST00000296783 CC2D2BQ6DHV5 1058 aa11.65□□□□□ -0.54
PAPD4-201ENST00000296783 SLFN12Q8IYM2 578 aa11.65□□□□□ -0.54
PAPD4-201ENST00000296783 CCDC170Q8IYT3 715 aa11.65□□□□□ -0.54
PAPD4-201ENST00000296783 PARD6BQ9BYG5 372 aa11.65□□□□□ -0.54
PAPD4-201ENST00000296783 ZSWIM4Q9H7M6 989 aa11.65□□□□□ -0.54
PAPD4-201ENST00000296783 PUF60Q9UHX1 559 aaKnown RBP11.65□□□□□ -0.54
PAPD4-201ENST00000296783 PLAGL2Q9UPG8 496 aa11.65□□□□□ -0.54
PAPD4-201ENST00000296783 NPHP3-ACAD11A0A0J9YXS1 232 aa11.65□□□□□ -0.54
PAPD4-201ENST00000296783 FRMD3A2A2Y4 597 aa11.65□□□□□ -0.54
PAPD4-201ENST00000296783 EIF3CLB5ME19 914 aaKnown RBP11.65□□□□□ -0.54
PAPD4-201ENST00000296783 PSMD14O00487 310 aa11.65□□□□□ -0.54
PAPD4-201ENST00000296783 PPIP5K2O43314 1243 aa11.65□□□□□ -0.54
PAPD4-201ENST00000296783 SLC26A4O43511 780 aa11.65□□□□□ -0.54
PAPD4-201ENST00000296783 FGFR1OPO95684 399 aaKnown RBP11.65□□□□□ -0.54
PAPD4-201ENST00000296783 PNMA6AP0CW24 399 aaPredicted RBP11.65□□□□□ -0.54
PAPD4-201ENST00000296783 SLC15A2Q16348 729 aa11.65□□□□□ -0.54
PAPD4-201ENST00000296783 PRR16Q569H4 304 aa11.65□□□□□ -0.54
PAPD4-201ENST00000296783 ARSHQ5FYA8 562 aa11.65□□□□□ -0.54
PAPD4-201ENST00000296783 TMCO3Q6UWJ1 677 aa11.65□□□□□ -0.54
PAPD4-201ENST00000296783 CEP112Q8N8E3 955 aa11.65□□□□□ -0.54
PAPD4-201ENST00000296783 PCMTD1Q96MG8 357 aaPredicted RBP11.65□□□□□ -0.54
PAPD4-201ENST00000296783 EIF3CQ99613 913 aaKnown RBP11.65□□□□□ -0.54
PAPD4-201ENST00000296783 POTEFA5A3E0 1075 aa11.64□□□□□ -0.55
PAPD4-201ENST00000296783 ZNF263O14978 683 aa11.64□□□□□ -0.55
PAPD4-201ENST00000296783 TBX3O15119 743 aa11.64□□□□□ -0.55
PAPD4-201ENST00000296783 SEC31AO94979 1220 aaKnown RBP11.64□□□□□ -0.55
PAPD4-201ENST00000296783 POTEIP0CG38 1075 aa11.64□□□□□ -0.55
PAPD4-201ENST00000296783 ECE1P42892 770 aa11.64□□□□□ -0.55
PAPD4-201ENST00000296783 CACNB1Q02641 598 aaPredicted RBP11.64□□□□□ -0.55
PAPD4-201ENST00000296783 BMS1Q14692 1282 aaKnown RBP11.64□□□□□ -0.55
PAPD4-201ENST00000296783 KIAA1755Q5JYT7 1200 aa11.64□□□□□ -0.55
PAPD4-201ENST00000296783 POTEGQ6S5H5 508 aa11.64□□□□□ -0.55
PAPD4-201ENST00000296783 POTEEQ6S8J3 1075 aa11.64□□□□□ -0.55
PAPD4-201ENST00000296783 CATSPER3Q86XQ3 398 aa11.64□□□□□ -0.55
PAPD4-201ENST00000296783 IQCDQ96DY2 449 aa11.64□□□□□ -0.55
PAPD4-201ENST00000296783 LACRTQ9GZZ8 138 aa11.64□□□□□ -0.55
PAPD4-201ENST00000296783 C21orf2O43822 256 aa11.64□□□□□ -0.55
PAPD4-201ENST00000296783 SSBP05455 408 aaKnown RBP eCLIP11.64□□□□□ -0.55
PAPD4-201ENST00000296783 PLEKP08567 350 aaPredicted RBP11.64□□□□□ -0.55
PAPD4-201ENST00000296783 SPATA31C1P0DKV0 1188 aa11.64□□□□□ -0.55
PAPD4-201ENST00000296783 ERCC3P19447 782 aa11.64□□□□□ -0.55
PAPD4-201ENST00000296783 CIITAP33076 1130 aa11.64□□□□□ -0.55
PAPD4-201ENST00000296783 CYLC1P35663 651 aaPredicted RBP11.64□□□□□ -0.55
PAPD4-201ENST00000296783 KRT83P78385 493 aa11.64□□□□□ -0.55
PAPD4-201ENST00000296783 CC2D1AQ6P1N0 951 aaPredicted RBP11.64□□□□□ -0.55
PAPD4-201ENST00000296783 GPBP1Q86WP2 473 aa11.64□□□□□ -0.55
PAPD4-201ENST00000296783 SPICE1Q8N0Z3 855 aa11.64□□□□□ -0.55
PAPD4-201ENST00000296783 ANKZF1Q9H8Y5 726 aa11.64□□□□□ -0.55
PAPD4-201ENST00000296783 FAM207AQ9NSI2 230 aaPredicted RBP11.64□□□□□ -0.55
PAPD4-201ENST00000296783 ZNHIT6Q9NWK9 470 aaKnown RBP11.64□□□□□ -0.55
PAPD4-201ENST00000296783 TBC1D7Q9P0N9 293 aa11.64□□□□□ -0.55
PAPD4-201ENST00000296783 PRR12Q9ULL5 1215 aa11.64□□□□□ -0.55
PAPD4-201ENST00000296783 SYNPO2Q9UMS6 1093 aa11.64□□□□□ -0.55
PAPD4-201ENST00000296783 COL4A5P29400 1685 aa11.64□□□□□ -0.55
PAPD4-201ENST00000296783 SPDYE2BA6NHP3 402 aa11.64□□□□□ -0.55
PAPD4-201ENST00000296783 SPDYE6P0CI01 402 aa11.64□□□□□ -0.55
PAPD4-201ENST00000296783 PSMC6P62333 389 aa11.64□□□□□ -0.55
PAPD4-201ENST00000296783 FKBP3Q00688 224 aaKnown RBP11.64□□□□□ -0.55
PAPD4-201ENST00000296783 CCDC122Q5T0U0 273 aa11.64□□□□□ -0.55
PAPD4-201ENST00000296783 MCTP2Q6DN12 878 aa11.64□□□□□ -0.55
PAPD4-201ENST00000296783 SUPT20HQ8NEM7 779 aa11.64□□□□□ -0.55
PAPD4-201ENST00000296783 SCFD1Q8WVM8 642 aa11.64□□□□□ -0.55
PAPD4-201ENST00000296783 TSG101Q99816 390 aa11.64□□□□□ -0.55
PAPD4-201ENST00000296783 KCTD10Q9H3F6 313 aa11.64□□□□□ -0.55
PAPD4-201ENST00000296783 BMP2KQ9NSY1 1161 aaPredicted RBP11.64□□□□□ -0.55
PAPD4-201ENST00000296783 ARHGAP20Q9P2F6 1191 aa11.64□□□□□ -0.55
PAPD4-201ENST00000296783 HERC5Q9UII4 1024 aaKnown RBP11.64□□□□□ -0.55
PAPD4-201ENST00000296783 SPDYE3A6NKU9 549 aa11.63□□□□□ -0.55
PAPD4-201ENST00000296783 FOSP01100 380 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms