RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 KRT26Q7Z3Y9 468 aa11.95□□□□□ -0.5
PBRM1-201ENST00000296302 DHX40Q8IX18 779 aaKnown RBP11.95□□□□□ -0.5
PBRM1-201ENST00000296302 RUBCNQ92622 972 aa11.95□□□□□ -0.5
PBRM1-201ENST00000296302 SDCCAG3Q96C92 435 aa11.95□□□□□ -0.5
PBRM1-201ENST00000296302 CARD10Q9BWT7 1032 aa11.95□□□□□ -0.5
PBRM1-201ENST00000296302 EXOC1LA0A1B0GW35 172 aa11.95□□□□□ -0.5
PBRM1-201ENST00000296302 SGK1O00141 431 aa11.95□□□□□ -0.5
PBRM1-201ENST00000296302 TTC4O95801 387 aa11.95□□□□□ -0.5
PBRM1-201ENST00000296302 LRRC41Q15345 812 aa11.95□□□□□ -0.5
PBRM1-201ENST00000296302 MMEL1Q495T6 779 aa11.95□□□□□ -0.5
PBRM1-201ENST00000296302 ALKBH5Q6P6C2 394 aaKnown RBP11.95□□□□□ -0.5
PBRM1-201ENST00000296302 COG1Q8WTW3 980 aa11.95□□□□□ -0.5
PBRM1-201ENST00000296302 CCDC127Q96BQ5 260 aa11.95□□□□□ -0.5
PBRM1-201ENST00000296302 TEKT3Q9BXF9 490 aa11.95□□□□□ -0.5
PBRM1-201ENST00000296302 IFT122Q9HBG6 1241 aa11.95□□□□□ -0.5
PBRM1-201ENST00000296302 PPP4R3CPQ6ZMV5 832 aa11.95□□□□□ -0.5
PBRM1-201ENST00000296302 TRIM50Q86XT4 487 aa11.95□□□□□ -0.5
PBRM1-201ENST00000296302 CCDC117Q8IWD4 279 aaPredicted RBP11.95□□□□□ -0.5
PBRM1-201ENST00000296302 EFHD1Q9BUP0 239 aa11.95□□□□□ -0.5
PBRM1-201ENST00000296302 AP1M1Q9BXS5 423 aa11.95□□□□□ -0.5
PBRM1-201ENST00000296302 ALDH8A1Q9H2A2 487 aaPredicted RBP11.95□□□□□ -0.5
PBRM1-201ENST00000296302 MAD1L1Q9Y6D9 718 aa11.95□□□□□ -0.5
PBRM1-201ENST00000296302 FRMPD2Q68DX3 1309 aaPredicted RBP11.95□□□□□ -0.5
PBRM1-201ENST00000296302 GPC4O75487 556 aa11.95□□□□□ -0.5
PBRM1-201ENST00000296302 PDE1BQ01064 536 aa11.95□□□□□ -0.5
PBRM1-201ENST00000296302 SATB1Q01826 763 aa11.95□□□□□ -0.5
PBRM1-201ENST00000296302 ADCY1Q08828 1119 aa11.95□□□□□ -0.5
PBRM1-201ENST00000296302 NLRP14Q86W24 1093 aa11.95□□□□□ -0.5
PBRM1-201ENST00000296302 PUS3Q9BZE2 481 aaKnown RBP11.95□□□□□ -0.5
PBRM1-201ENST00000296302 PARP3Q9Y6F1 533 aa11.95□□□□□ -0.5
PBRM1-201ENST00000296302 CFAP73A6NFT4 308 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 NOP56O00567 594 aaKnown RBP11.94□□□□□ -0.5
PBRM1-201ENST00000296302 GYG1P46976 350 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 DRP2Q13474 957 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 PROSER3Q2NL68 480 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 FBXO11Q86XK2 927 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 KSR1Q8IVT5 923 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 RHOT2Q8IXI1 618 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 VIPAS39Q9H9C1 493 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 DISC1Q9NRI5 854 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 GFPT2O94808 682 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 SASH1O94885 1247 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 POLR2MP0CAP2 368 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 PPP2R2AP63151 447 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 SCYL2Q6P3W7 929 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 NSMFQ6X4W1 530 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 GDAP1Q8TB36 358 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 SCYL1Q96KG9 808 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 PITPNM3Q9BZ71 974 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 GCNT4Q9P109 453 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 STOML1Q9UBI4 398 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 MRPL11Q9Y3B7 192 aaKnown RBP11.94□□□□□ -0.5
PBRM1-201ENST00000296302 PRDM15P57071 1507 aaPredicted RBP11.94□□□□□ -0.5
PBRM1-201ENST00000296302 GRID2IPA4D2P6 1211 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 H7C0C1 242 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 DLATP10515 647 aaKnown RBP11.94□□□□□ -0.5
PBRM1-201ENST00000296302 ATP5OP48047 213 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 PPP2R5CQ13362 524 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 SNX1Q13596 522 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 ASPRV1Q53RT3 343 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 PARP9Q8IXQ6 854 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.94□□□□□ -0.5
PBRM1-201ENST00000296302 KCNF1Q9H3M0 494 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 EMILIN3Q9NT22 766 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.94□□□□□ -0.5
PBRM1-201ENST00000296302 STK36Q9NRP7 1315 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 ATP10DQ9P241 1426 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 SRGAP2O75044 1071 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 PLCG1P19174 1290 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 CA4P22748 312 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 XKR9Q5GH70 373 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 ZNF449Q6P9G9 518 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 RASGRP4Q8TDF6 673 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 AIFM3Q96NN9 605 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 CSRNP1Q96S65 589 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 ZSWIM5Q9P217 1185 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 TBK1Q9UHD2 729 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 ADAMTS1Q9UHI8 967 aa11.94□□□□□ -0.5
PBRM1-201ENST00000296302 TNNC2P02585 160 aa11.93□□□□□ -0.5
PBRM1-201ENST00000296302 CPXCR1Q8N123 301 aa11.93□□□□□ -0.5
PBRM1-201ENST00000296302 PDZD8Q8NEN9 1154 aa11.93□□□□□ -0.5
PBRM1-201ENST00000296302 MRPL47Q9HD33 250 aaKnown RBP11.93□□□□□ -0.5
PBRM1-201ENST00000296302 IPO5O00410 1097 aaKnown RBP11.93□□□□□ -0.5
PBRM1-201ENST00000296302 FGGP02679 453 aa11.93□□□□□ -0.5
PBRM1-201ENST00000296302 NT5C2P49902 561 aa11.93□□□□□ -0.5
PBRM1-201ENST00000296302 PTPN12Q05209 780 aaKnown RBP11.93□□□□□ -0.5
PBRM1-201ENST00000296302 PABPC4Q13310 644 aaKnown RBP eCLIP11.93□□□□□ -0.5
PBRM1-201ENST00000296302 DMP1Q13316 513 aaPredicted RBP11.93□□□□□ -0.5
PBRM1-201ENST00000296302 SPARCL1Q14515 664 aa11.93□□□□□ -0.5
PBRM1-201ENST00000296302 ZYXQ15942 572 aaKnown RBP11.93□□□□□ -0.5
PBRM1-201ENST00000296302 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.93□□□□□ -0.5
PBRM1-201ENST00000296302 GPATCH4Q5T3I0 446 aaKnown RBP11.93□□□□□ -0.5
PBRM1-201ENST00000296302 TBCKQ8TEA7 893 aa11.93□□□□□ -0.5
PBRM1-201ENST00000296302 ATP6V1G3Q96LB4 118 aa11.93□□□□□ -0.5
PBRM1-201ENST00000296302 KIF2CQ99661 725 aa11.93□□□□□ -0.5
PBRM1-201ENST00000296302 PUS7LQ9H0K6 701 aaKnown RBP11.93□□□□□ -0.5
PBRM1-201ENST00000296302 PACSIN2Q9UNF0 486 aaPredicted RBP11.93□□□□□ -0.5
PBRM1-201ENST00000296302 WDR19Q8NEZ3 1342 aa11.93□□□□□ -0.5
PBRM1-201ENST00000296302 MIF4GDA9UHW6 222 aaKnown RBP11.93□□□□□ -0.5
PBRM1-201ENST00000296302 CTIFO43310 598 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms