RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 PANK4Q9NVE7 773 aa13.11□□□□□ -0.31
RHO-201ENST00000296271 RNF216Q9NWF9 866 aaPredicted RBP13.11□□□□□ -0.31
RHO-201ENST00000296271 ZBTB39O15060 712 aa13.1□□□□□ -0.31
RHO-201ENST00000296271 PLA2G4BP0C869 781 aa13.1□□□□□ -0.31
RHO-201ENST00000296271 PPP1R18Q6NYC8 613 aa13.1□□□□□ -0.31
RHO-201ENST00000296271 LENG9Q96B70 501 aa13.1□□□□□ -0.31
RHO-201ENST00000296271 CRACR2AQ9BSW2 395 aa13.1□□□□□ -0.31
RHO-201ENST00000296271 NDST4Q9H3R1 872 aa13.1□□□□□ -0.31
RHO-201ENST00000296271 NHEJ1Q9H9Q4 299 aaPredicted RBP13.1□□□□□ -0.31
RHO-201ENST00000296271 KCNMB3Q9NPA1 279 aa13.1□□□□□ -0.31
RHO-201ENST00000296271 SERPINA10Q9UK55 444 aa13.1□□□□□ -0.31
RHO-201ENST00000296271 COL4A5P29400 1685 aa13.1□□□□□ -0.31
RHO-201ENST00000296271 SPIRE1Q08AE8 756 aa13.1□□□□□ -0.31
RHO-201ENST00000296271 PABPC4Q13310 644 aaKnown RBP eCLIP13.1□□□□□ -0.31
RHO-201ENST00000296271 DGKZQ13574 1117 aa13.1□□□□□ -0.31
RHO-201ENST00000296271 STYK1Q6J9G0 422 aa13.1□□□□□ -0.31
RHO-201ENST00000296271 CCDC174Q6PII3 467 aa13.1□□□□□ -0.31
RHO-201ENST00000296271 TMEM179Q6ZVK1 233 aa13.1□□□□□ -0.31
RHO-201ENST00000296271 GPBP1Q86WP2 473 aa13.1□□□□□ -0.31
RHO-201ENST00000296271 CATSPER3Q86XQ3 398 aa13.1□□□□□ -0.31
RHO-201ENST00000296271 HINFPQ9BQA5 517 aa13.1□□□□□ -0.31
RHO-201ENST00000296271 RAB34Q9BZG1 259 aa13.1□□□□□ -0.31
RHO-201ENST00000296271 SIK3Q9Y2K2 1263 aa13.1□□□□□ -0.31
RHO-201ENST00000296271 PVALEFA0A1B0GWK0 134 aa13.09□□□□□ -0.31
RHO-201ENST00000296271 RSPH10B2B2RC85 870 aa13.09□□□□□ -0.31
RHO-201ENST00000296271 ATP1A1P05023 1023 aaKnown RBP13.09□□□□□ -0.31
RHO-201ENST00000296271 RSPH10BP0C881 870 aa13.09□□□□□ -0.31
RHO-201ENST00000296271 PNMA6AP0CW24 399 aaPredicted RBP13.09□□□□□ -0.31
RHO-201ENST00000296271 TRIM14Q14142 442 aa13.09□□□□□ -0.31
RHO-201ENST00000296271 VWA3BQ502W6 1294 aa13.09□□□□□ -0.31
RHO-201ENST00000296271 SYDE2Q5VT97 1194 aa13.09□□□□□ -0.31
RHO-201ENST00000296271 FBXO11Q86XK2 927 aa13.09□□□□□ -0.31
RHO-201ENST00000296271 NOA1Q8NC60 698 aaKnown RBP13.09□□□□□ -0.31
RHO-201ENST00000296271 DCAF4Q8WV16 495 aa13.09□□□□□ -0.31
RHO-201ENST00000296271 PNKPQ96T60 521 aa13.09□□□□□ -0.31
RHO-201ENST00000296271 TMEM39BQ9GZU3 492 aa13.09□□□□□ -0.31
RHO-201ENST00000296271 SUGCTQ9HAC7 445 aa13.09□□□□□ -0.31
RHO-201ENST00000296271 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.09□□□□□ -0.31
RHO-201ENST00000296271 RGL1Q9NZL6 768 aa13.09□□□□□ -0.31
RHO-201ENST00000296271 CDC23Q9UJX2 597 aa13.09□□□□□ -0.31
RHO-201ENST00000296271 MACROD2A1Z1Q3 448 aa13.09□□□□□ -0.31
RHO-201ENST00000296271 CTAGE9A4FU28 777 aa13.09□□□□□ -0.31
RHO-201ENST00000296271 EML1O00423 815 aa13.09□□□□□ -0.31
RHO-201ENST00000296271 TRAF5O00463 557 aa13.09□□□□□ -0.31
RHO-201ENST00000296271 PSMD14O00487 310 aa13.09□□□□□ -0.31
RHO-201ENST00000296271 RHOXF2BP0C7M4 288 aa13.09□□□□□ -0.31
RHO-201ENST00000296271 BMP3P12645 472 aa13.09□□□□□ -0.31
RHO-201ENST00000296271 CYP11B2P19099 503 aa13.09□□□□□ -0.31
RHO-201ENST00000296271 SLC15A2Q16348 729 aa13.09□□□□□ -0.31
RHO-201ENST00000296271 CCDC122Q5T0U0 273 aa13.09□□□□□ -0.31
RHO-201ENST00000296271 FAM83BQ5T0W9 1011 aa13.09□□□□□ -0.31
RHO-201ENST00000296271 RBM26Q5T8P6 1007 aaKnown RBP13.09□□□□□ -0.31
RHO-201ENST00000296271 GUF1Q8N442 669 aaKnown RBP13.09□□□□□ -0.31
RHO-201ENST00000296271 ETNPPLQ8TBG4 499 aa13.09□□□□□ -0.31
RHO-201ENST00000296271 CRYGNQ8WXF5 182 aa13.09□□□□□ -0.31
RHO-201ENST00000296271 RHOXF2Q9BQY4 288 aa13.09□□□□□ -0.31
RHO-201ENST00000296271 AMNQ9BXJ7 453 aa13.09□□□□□ -0.31
RHO-201ENST00000296271 VEZTQ9HBM0 779 aa13.09□□□□□ -0.31
RHO-201ENST00000296271 FBXO28Q9NVF7 368 aa13.09□□□□□ -0.31
RHO-201ENST00000296271 ARHGAP20Q9P2F6 1191 aa13.09□□□□□ -0.31
RHO-201ENST00000296271 PRR12Q9ULL5 1215 aa13.09□□□□□ -0.31
RHO-201ENST00000296271 SFI1A8K8P3 1242 aa13.08□□□□□ -0.32
RHO-201ENST00000296271 SPATA31C1P0DKV0 1188 aa13.08□□□□□ -0.32
RHO-201ENST00000296271 PLA2G4AP47712 749 aa13.08□□□□□ -0.32
RHO-201ENST00000296271 CHMP4BP1P59074 171 aa13.08□□□□□ -0.32
RHO-201ENST00000296271 ORC2Q13416 577 aaPredicted RBP13.08□□□□□ -0.32
RHO-201ENST00000296271 HERC4Q5GLZ8 1057 aaPredicted RBP13.08□□□□□ -0.32
RHO-201ENST00000296271 FAM26FQ5R3K3 315 aa13.08□□□□□ -0.32
RHO-201ENST00000296271 FLAD1Q8NFF5 587 aa13.08□□□□□ -0.32
RHO-201ENST00000296271 TANGO6Q9C0B7 1094 aa13.08□□□□□ -0.32
RHO-201ENST00000296271 NLRC4Q9NPP4 1024 aa13.08□□□□□ -0.32
RHO-201ENST00000296271 PCDHA2Q9Y5H9 948 aa13.08□□□□□ -0.32
RHO-201ENST00000296271 FAM170AA1A519 330 aa13.08□□□□□ -0.32
RHO-201ENST00000296271 ZNF185O15231 689 aa13.08□□□□□ -0.32
RHO-201ENST00000296271 ZRANB2O95218 330 aaKnown RBP eCLIP13.08□□□□□ -0.32
RHO-201ENST00000296271 CFBP00751 764 aa13.08□□□□□ -0.32
RHO-201ENST00000296271 KCNMA1Q12791 1236 aa13.08□□□□□ -0.32
RHO-201ENST00000296271 MEA1Q16626 185 aa13.08□□□□□ -0.32
RHO-201ENST00000296271 AEBP2Q6ZN18 517 aaPredicted RBP13.08□□□□□ -0.32
RHO-201ENST00000296271 MYOCDQ8IZQ8 938 aa13.08□□□□□ -0.32
RHO-201ENST00000296271 ANKRD13CQ8N6S4 541 aa13.08□□□□□ -0.32
RHO-201ENST00000296271 NOC3LQ8WTT2 800 aaKnown RBP13.08□□□□□ -0.32
RHO-201ENST00000296271 SCFD1Q8WVM8 642 aa13.08□□□□□ -0.32
RHO-201ENST00000296271 CAPZA3Q96KX2 299 aa13.08□□□□□ -0.32
RHO-201ENST00000296271 NAPGQ99747 312 aaPredicted RBP13.08□□□□□ -0.32
RHO-201ENST00000296271 ANKZF1Q9H8Y5 726 aa13.08□□□□□ -0.32
RHO-201ENST00000296271 FAM53CQ9NYF3 392 aa13.08□□□□□ -0.32
RHO-201ENST00000296271 MSH4O15457 936 aa13.07□□□□□ -0.32
RHO-201ENST00000296271 CHMP2AO43633 222 aa13.07□□□□□ -0.32
RHO-201ENST00000296271 ZBED6P86452 979 aa13.07□□□□□ -0.32
RHO-201ENST00000296271 KCNA1Q09470 495 aa13.07□□□□□ -0.32
RHO-201ENST00000296271 ENOX2Q16206 610 aaKnown RBP13.07□□□□□ -0.32
RHO-201ENST00000296271 RRAGAQ7L523 313 aa13.07□□□□□ -0.32
RHO-201ENST00000296271 SRGAP1Q7Z6B7 1085 aa13.07□□□□□ -0.32
RHO-201ENST00000296271 CNKSR1Q969H4 720 aa13.07□□□□□ -0.32
RHO-201ENST00000296271 ERGIC2Q96RQ1 377 aa13.07□□□□□ -0.32
RHO-201ENST00000296271 LRRC53A6NM62 1247 aa13.07□□□□□ -0.32
RHO-201ENST00000296271 SLC12A3P55017 1021 aa13.07□□□□□ -0.32
RHO-201ENST00000296271 AMPD2Q01433 879 aa13.07□□□□□ -0.32
RHO-201ENST00000296271 ZCWPW2Q504Y3 356 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms