RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 DHX40Q8IX18 779 aaKnown RBP12.7□□□□□ -0.38
SNIP1-201ENST00000296215 SPEF1Q9Y4P9 236 aa12.7□□□□□ -0.38
SNIP1-201ENST00000296215 SNTNA6NMZ2 147 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 SART1O43290 800 aaKnown RBP12.69□□□□□ -0.38
SNIP1-201ENST00000296215 HAUS5O94927 633 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 MCF2P10911 925 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 LRPAP1P30533 357 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 CCR3P51677 355 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 ARID5AQ03989 594 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 TRAF7Q6Q0C0 670 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 B3GNT6Q6ZMB0 384 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 ANKRD13AQ8IZ07 590 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 GIPC3Q8TF64 312 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 DHTKD1Q96HY7 919 aaPredicted RBP12.69□□□□□ -0.38
SNIP1-201ENST00000296215 RILPQ96NA2 401 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 PSMA7O14818 248 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 RTN2O75298 545 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 STAM2O75886 525 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 CALB2P22676 271 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 SLCO1A2P46721 670 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 NDUFA8P51970 172 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 RASSF7Q02833 373 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 ELMSAN1Q6PJG2 1045 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 NEK10Q6ZWH5 1172 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 GALNT6Q8NCL4 622 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 PALM3A6NDB9 673 aaPredicted RBP12.69□□□□□ -0.38
SNIP1-201ENST00000296215 SERPINB1P30740 379 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 ANKRD20A4Q4UJ75 823 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 RIC3Q7Z5B4 369 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 CCDC85AQ96PX6 553 aaPredicted RBP12.69□□□□□ -0.38
SNIP1-201ENST00000296215 PANK4Q9NVE7 773 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 EMC3Q9P0I2 261 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 TBC1D7Q9P0N9 293 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 RNF14Q9UBS8 474 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 ESYT3A0FGR9 886 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 RSPH10B2B2RC85 870 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 KRIT1O00522 736 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 RSPH10BP0C881 870 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 MARK3P27448 753 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 XRCC4Q13426 336 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 CEP295NLQ96MC4 621 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 FUCA2Q9BTY2 467 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 TMEM60Q9H2L4 133 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 PRM3Q9NNZ6 103 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 RABGEF1Q9UJ41 708 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 CAB39Q9Y376 341 aaPredicted RBP12.69□□□□□ -0.38
SNIP1-201ENST00000296215 N6AMT1Q9Y5N5 214 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 DMRT2Q9Y5R5 561 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 MYOM3Q5VTT5 1437 aa12.69□□□□□ -0.38
SNIP1-201ENST00000296215 CAPN9O14815 690 aa12.68□□□□□ -0.38
SNIP1-201ENST00000296215 NAT2P11245 290 aa12.68□□□□□ -0.38
SNIP1-201ENST00000296215 ITIH4Q14624 930 aa12.68□□□□□ -0.38
SNIP1-201ENST00000296215 CDCA2Q69YH5 1023 aaPredicted RBP12.68□□□□□ -0.38
SNIP1-201ENST00000296215 OSCP1Q8WVF1 389 aa12.68□□□□□ -0.38
SNIP1-201ENST00000296215 ACSBG1Q96GR2 724 aa12.68□□□□□ -0.38
SNIP1-201ENST00000296215 PAIP1Q9H074 479 aaKnown RBP12.68□□□□□ -0.38
SNIP1-201ENST00000296215 SPDYE5A6NIY4 337 aa12.68□□□□□ -0.38
SNIP1-201ENST00000296215 HOXD12P35452 270 aa12.68□□□□□ -0.38
SNIP1-201ENST00000296215 KRT20P35900 424 aa12.68□□□□□ -0.38
SNIP1-201ENST00000296215 STMN3Q9NZ72 180 aa12.68□□□□□ -0.38
SNIP1-201ENST00000296215 EIF2B5Q13144 721 aaKnown RBP12.68□□□□□ -0.38
SNIP1-201ENST00000296215 LRRC36Q1X8D7 754 aa12.68□□□□□ -0.38
SNIP1-201ENST00000296215 C1orf146Q5VVC0 180 aa12.68□□□□□ -0.38
SNIP1-201ENST00000296215 ANO1Q5XXA6 986 aa12.68□□□□□ -0.38
SNIP1-201ENST00000296215 CREB3L3Q68CJ9 461 aa12.68□□□□□ -0.38
SNIP1-201ENST00000296215 TAS2R42Q7RTR8 314 aa12.68□□□□□ -0.38
SNIP1-201ENST00000296215 HEATR4Q86WZ0 1026 aa12.68□□□□□ -0.38
SNIP1-201ENST00000296215 NELFBQ8WX92 580 aa12.68□□□□□ -0.38
SNIP1-201ENST00000296215 ZFYVE19Q96K21 471 aa12.68□□□□□ -0.38
SNIP1-201ENST00000296215 BHMT2Q9H2M3 363 aa12.68□□□□□ -0.38
SNIP1-201ENST00000296215 KCNK3O14649 394 aa12.68□□□□□ -0.38
SNIP1-201ENST00000296215 VDRP11473 427 aa12.68□□□□□ -0.38
SNIP1-201ENST00000296215 HSPA1LP34931 641 aa12.68□□□□□ -0.38
SNIP1-201ENST00000296215 GRIN1Q05586 938 aa12.68□□□□□ -0.38
SNIP1-201ENST00000296215 STRN3Q13033 797 aa12.68□□□□□ -0.38
SNIP1-201ENST00000296215 LRRC1Q9BTT6 524 aa12.68□□□□□ -0.38
SNIP1-201ENST00000296215 NACAP1Q9BZK3 213 aa12.68□□□□□ -0.38
SNIP1-201ENST00000296215 UBE2OQ9C0C9 1292 aaKnown RBP12.68□□□□□ -0.38
SNIP1-201ENST00000296215 KRT82Q9NSB4 513 aa12.68□□□□□ -0.38
SNIP1-201ENST00000296215 TSPYL4Q9UJ04 414 aa12.68□□□□□ -0.38
SNIP1-201ENST00000296215 LEMD3Q9Y2U8 911 aa12.68□□□□□ -0.38
SNIP1-201ENST00000296215 FANCD2Q9BXW9 1451 aa12.68□□□□□ -0.38
SNIP1-201ENST00000296215 LINC00854A0A1B0GVQ3 168 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 TBKBP1A7MCY6 615 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 UBOX5O94941 541 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 NDUFA10O95299 355 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 CLPTM1O96005 669 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 NFE2L2Q16236 605 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 TMTC4Q5T4D3 741 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 SNX30Q5VWJ9 437 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 RFX8Q6ZV50 586 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 WAPLQ7Z5K2 1190 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 FAM9CQ8IZT9 166 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 RUBCNQ92622 972 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 FAM161BQ96MY7 647 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 CLIC5Q9NZA1 410 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 GNAT3A8MTJ3 354 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 ATP2A1O14983 1001 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 TEX28O15482 410 aa12.67□□□□□ -0.38
SNIP1-201ENST00000296215 GAS8O95995 478 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms