RNA–Protein interactions for RNA: ENST00000295688.7

CCT3-201, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT3, Length 2,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-201ENST00000295688 BARGINQ6ZT62 677 aa16.37■□□□□ 0.21
CCT3-201ENST00000295688 C15orf52Q6ZUT6 534 aaKnown RBP16.37■□□□□ 0.21
CCT3-201ENST00000295688 DDX12PQ92771 950 aa16.37■□□□□ 0.21
CCT3-201ENST00000295688 VAT1LQ9HCJ6 419 aa16.37■□□□□ 0.21
CCT3-201ENST00000295688 ANKIB1Q9P2G1 1089 aa16.37■□□□□ 0.21
CCT3-201ENST00000295688 SNED1Q8TER0 1413 aa16.37■□□□□ 0.21
CCT3-201ENST00000295688 SLC26A4O43511 780 aa16.37■□□□□ 0.21
CCT3-201ENST00000295688 TM4SF1P30408 202 aa16.37■□□□□ 0.21
CCT3-201ENST00000295688 PAK2Q13177 524 aa16.37■□□□□ 0.21
CCT3-201ENST00000295688 DIXDC1Q155Q3 683 aa16.37■□□□□ 0.21
CCT3-201ENST00000295688 CCDC40Q4G0X9 1142 aa16.37■□□□□ 0.21
CCT3-201ENST00000295688 ASPRV1Q53RT3 343 aa16.37■□□□□ 0.21
CCT3-201ENST00000295688 PPP1R18Q6NYC8 613 aa16.37■□□□□ 0.21
CCT3-201ENST00000295688 SLF2Q8IX21 1173 aa16.37■□□□□ 0.21
CCT3-201ENST00000295688 RTFDC1Q9BY42 306 aaPredicted RBP16.37■□□□□ 0.21
CCT3-201ENST00000295688 NKRFO15226 690 aaKnown RBP eCLIP16.36■□□□□ 0.21
CCT3-201ENST00000295688 EIF3HO15372 352 aaKnown RBP eCLIP16.36■□□□□ 0.21
CCT3-201ENST00000295688 RPS6KA4O75676 772 aa16.36■□□□□ 0.21
CCT3-201ENST00000295688 HGSNATQ68CP4 663 aa16.36■□□□□ 0.21
CCT3-201ENST00000295688 PPP4R3AQ6IN85 833 aa16.36■□□□□ 0.21
CCT3-201ENST00000295688 TEX11Q8IYF3 940 aa16.36■□□□□ 0.21
CCT3-201ENST00000295688 ZFP91Q96JP5 570 aaPredicted RBP16.36■□□□□ 0.21
CCT3-201ENST00000295688 NAP1L4Q99733 375 aaKnown RBP16.36■□□□□ 0.21
CCT3-201ENST00000295688 CPVLQ9H3G5 476 aa16.36■□□□□ 0.21
CCT3-201ENST00000295688 GDF3Q9NR23 364 aa16.36■□□□□ 0.21
CCT3-201ENST00000295688 GPR75-ASB3A0A0A6YYF3 556 aa16.36■□□□□ 0.21
CCT3-201ENST00000295688 BTDP43251 543 aa16.36■□□□□ 0.21
CCT3-201ENST00000295688 SLC7A5Q01650 507 aa16.36■□□□□ 0.21
CCT3-201ENST00000295688 GFPT1Q06210 699 aaPredicted RBP16.36■□□□□ 0.21
CCT3-201ENST00000295688 KCNMA1Q12791 1236 aa16.36■□□□□ 0.21
CCT3-201ENST00000295688 TADA2BQ86TJ2 420 aa16.36■□□□□ 0.21
CCT3-201ENST00000295688 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.36■□□□□ 0.21
CCT3-201ENST00000295688 TMEM260Q9NX78 707 aa16.36■□□□□ 0.21
CCT3-201ENST00000295688 SBF2Q86WG5 1849 aa16.35■□□□□ 0.21
CCT3-201ENST00000295688 SPATA31A5Q5VU36 1347 aa16.35■□□□□ 0.21
CCT3-201ENST00000295688 SPATA31A7Q8IWB4 1347 aa16.35■□□□□ 0.21
CCT3-201ENST00000295688 KDM3AQ9Y4C1 1321 aa16.35■□□□□ 0.21
CCT3-201ENST00000295688 CDK5RAP2Q96SN8 1893 aa16.35■□□□□ 0.21
CCT3-201ENST00000295688 TRAF5O00463 557 aa16.35■□□□□ 0.21
CCT3-201ENST00000295688 GUCY2CP25092 1073 aa16.35■□□□□ 0.21
CCT3-201ENST00000295688 CXCR5P32302 372 aa16.35■□□□□ 0.21
CCT3-201ENST00000295688 GNGT1P63211 74 aa16.35■□□□□ 0.21
CCT3-201ENST00000295688 PDE4CQ08493 712 aa16.35■□□□□ 0.21
CCT3-201ENST00000295688 NAB2Q15742 525 aa16.35■□□□□ 0.21
CCT3-201ENST00000295688 MTMR8Q96EF0 704 aa16.35■□□□□ 0.21
CCT3-201ENST00000295688 CEP95Q96GE4 821 aa16.35■□□□□ 0.21
CCT3-201ENST00000295688 NT5C3AQ9H0P0 336 aa16.35■□□□□ 0.21
CCT3-201ENST00000295688 RBM12Q9NTZ6 932 aaKnown RBP16.35■□□□□ 0.21
CCT3-201ENST00000295688 ATP6V0A2Q9Y487 856 aa16.35■□□□□ 0.21
CCT3-201ENST00000295688 ATXN2Q99700 1313 aaKnown RBP16.35■□□□□ 0.21
CCT3-201ENST00000295688 AHDC1Q5TGY3 1603 aaPredicted RBP16.35■□□□□ 0.21
CCT3-201ENST00000295688 KCNQ2O43526 872 aa16.34■□□□□ 0.21
CCT3-201ENST00000295688 SLC1A4P43007 532 aa16.34■□□□□ 0.21
CCT3-201ENST00000295688 MARSP56192 900 aaKnown RBP16.34■□□□□ 0.21
CCT3-201ENST00000295688 GRAPQ13588 217 aa16.34■□□□□ 0.21
CCT3-201ENST00000295688 ZCWPW2Q504Y3 356 aa16.34■□□□□ 0.21
CCT3-201ENST00000295688 FAM83BQ5T0W9 1011 aa16.34■□□□□ 0.21
CCT3-201ENST00000295688 C10orf76Q5T2E6 689 aa16.34■□□□□ 0.21
CCT3-201ENST00000295688 CFAP58Q5T655 872 aa16.34■□□□□ 0.21
CCT3-201ENST00000295688 SPATS2Q86XZ4 545 aaKnown RBP16.34■□□□□ 0.21
CCT3-201ENST00000295688 MREGQ8N565 214 aa16.34■□□□□ 0.21
CCT3-201ENST00000295688 C1orf131Q8NDD1 294 aaKnown RBP16.34■□□□□ 0.21
CCT3-201ENST00000295688 GRAPLQ8TC17 118 aaPredicted RBP16.34■□□□□ 0.21
CCT3-201ENST00000295688 BCAS4Q8TDM0 211 aa16.34■□□□□ 0.21
CCT3-201ENST00000295688 SALL4Q9UJQ4 1053 aa16.34■□□□□ 0.21
CCT3-201ENST00000295688 CES2O00748 559 aa16.34■□□□□ 0.21
CCT3-201ENST00000295688 NCK2O43639 380 aa16.34■□□□□ 0.21
CCT3-201ENST00000295688 BUB1O43683 1085 aa16.34■□□□□ 0.21
CCT3-201ENST00000295688 GCFC2P16383 781 aaKnown RBP16.34■□□□□ 0.21
CCT3-201ENST00000295688 COASYQ13057 564 aa16.34■□□□□ 0.21
CCT3-201ENST00000295688 FAM26FQ5R3K3 315 aa16.34■□□□□ 0.21
CCT3-201ENST00000295688 CD302Q8IX05 232 aa16.34■□□□□ 0.21
CCT3-201ENST00000295688 CCDC65Q8IXS2 484 aa16.34■□□□□ 0.21
CCT3-201ENST00000295688 WHAMMQ8TF30 809 aa16.34■□□□□ 0.21
CCT3-201ENST00000295688 PANK4Q9NVE7 773 aa16.34■□□□□ 0.21
CCT3-201ENST00000295688 DDX60LQ5H9U9 1706 aaKnown RBP16.33■□□□□ 0.21
CCT3-201ENST00000295688 ATAD5Q96QE3 1844 aa16.33■□□□□ 0.21
CCT3-201ENST00000295688 USP17L5A8MUK1 530 aa16.33■□□□□ 0.2
CCT3-201ENST00000295688 SLC37A4O43826 429 aa16.33■□□□□ 0.2
CCT3-201ENST00000295688 TDP2O95551 362 aa16.33■□□□□ 0.2
CCT3-201ENST00000295688 CCT5P48643 541 aa16.33■□□□□ 0.2
CCT3-201ENST00000295688 SLC18A3Q16572 532 aa16.33■□□□□ 0.2
CCT3-201ENST00000295688 HYIQ5T013 277 aa16.33■□□□□ 0.2
CCT3-201ENST00000295688 B4GALNT4Q76KP1 1039 aa16.33■□□□□ 0.2
CCT3-201ENST00000295688 ANKRD13CQ8N6S4 541 aa16.33■□□□□ 0.2
CCT3-201ENST00000295688 EIF1ADQ8N9N8 165 aaKnown RBP16.33■□□□□ 0.2
CCT3-201ENST00000295688 TSEN2Q8NCE0 465 aaKnown RBP16.33■□□□□ 0.2
CCT3-201ENST00000295688 DNAJC19Q96DA6 116 aa16.33■□□□□ 0.2
CCT3-201ENST00000295688 FAM163AQ96GL9 167 aaPredicted RBP16.33■□□□□ 0.2
CCT3-201ENST00000295688 PSMB7Q99436 277 aa16.33■□□□□ 0.2
CCT3-201ENST00000295688 LSM14BQ9BX40 385 aaKnown RBP16.33■□□□□ 0.2
CCT3-201ENST00000295688 UBA5Q9GZZ9 404 aa16.33■□□□□ 0.2
CCT3-201ENST00000295688 PLEKHA4Q9H4M7 779 aa16.33■□□□□ 0.2
CCT3-201ENST00000295688 NLRC4Q9NPP4 1024 aa16.33■□□□□ 0.2
CCT3-201ENST00000295688 PCDHGC5Q9Y5F6 944 aa16.33■□□□□ 0.2
CCT3-201ENST00000295688 TNRC6CQ9HCJ0 1690 aaKnown RBP16.33■□□□□ 0.2
CCT3-201ENST00000295688 POTEMA6NI47 508 aa16.33■□□□□ 0.2
CCT3-201ENST00000295688 MARCH6O60337 910 aa16.33■□□□□ 0.2
CCT3-201ENST00000295688 PDHBP11177 359 aa16.33■□□□□ 0.2
CCT3-201ENST00000295688 TNNC1P63316 161 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms