RNA–Protein interactions for RNA: ENST00000294119.6

UBXN1-201, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene UBXN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-201ENST00000294119 CACNA1GO43497 2377 aa18.4■□□□□ 0.54
UBXN1-201ENST00000294119 MMP3P08254 477 aa18.4■□□□□ 0.54
UBXN1-201ENST00000294119 MX1P20591 662 aa18.4■□□□□ 0.54
UBXN1-201ENST00000294119 ICAM3P32942 547 aa18.4■□□□□ 0.54
UBXN1-201ENST00000294119 CAMK1Q14012 370 aa18.4■□□□□ 0.54
UBXN1-201ENST00000294119 CCDC62Q6P9F0 684 aa18.4■□□□□ 0.54
UBXN1-201ENST00000294119 PLEKHM2Q8IWE5 1019 aa18.4■□□□□ 0.54
UBXN1-201ENST00000294119 MKNK2Q9HBH9 465 aa18.4■□□□□ 0.54
UBXN1-201ENST00000294119 HDAC6Q9UBN7 1215 aa18.4■□□□□ 0.54
UBXN1-201ENST00000294119 MYH7P12883 1935 aa18.4■□□□□ 0.54
UBXN1-201ENST00000294119 EP300Q09472 2414 aaPredicted RBP18.39■□□□□ 0.53
UBXN1-201ENST00000294119 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.39■□□□□ 0.53
UBXN1-201ENST00000294119 PDGFBP01127 241 aaPredicted RBP18.39■□□□□ 0.53
UBXN1-201ENST00000294119 ATP5JP18859 108 aa18.39■□□□□ 0.53
UBXN1-201ENST00000294119 PDE4AP27815 886 aa18.39■□□□□ 0.53
UBXN1-201ENST00000294119 AFG1LQ8WV93 481 aa18.39■□□□□ 0.53
UBXN1-201ENST00000294119 DNAJC2Q99543 621 aaKnown RBP18.39■□□□□ 0.53
UBXN1-201ENST00000294119 PRR12Q9ULL5 1215 aa18.39■□□□□ 0.53
UBXN1-201ENST00000294119 ACACBO00763 2458 aa18.38■□□□□ 0.53
UBXN1-201ENST00000294119 HAS3O00219 553 aa18.38■□□□□ 0.53
UBXN1-201ENST00000294119 NFIBO00712 420 aa18.38■□□□□ 0.53
UBXN1-201ENST00000294119 ICAM1P05362 532 aa18.38■□□□□ 0.53
UBXN1-201ENST00000294119 TXNP10599 105 aaKnown RBP18.38■□□□□ 0.53
UBXN1-201ENST00000294119 BMPR1AP36894 532 aa18.38■□□□□ 0.53
UBXN1-201ENST00000294119 PDE1AP54750 535 aa18.38■□□□□ 0.53
UBXN1-201ENST00000294119 SNAP25P60880 206 aa18.38■□□□□ 0.53
UBXN1-201ENST00000294119 ADSSL1Q8N142 457 aa18.38■□□□□ 0.53
UBXN1-201ENST00000294119 RIPOR3Q96MK2 946 aa18.38■□□□□ 0.53
UBXN1-201ENST00000294119 C11orf84Q9BUA3 381 aaPredicted RBP18.38■□□□□ 0.53
UBXN1-201ENST00000294119 PUS7LQ9H0K6 701 aaKnown RBP18.38■□□□□ 0.53
UBXN1-201ENST00000294119 RC3H2Q9HBD1 1191 aaKnown RBP18.38■□□□□ 0.53
UBXN1-201ENST00000294119 ECHDC1Q9NTX5 307 aa18.38■□□□□ 0.53
UBXN1-201ENST00000294119 CCPG1Q9ULG6 757 aa18.38■□□□□ 0.53
UBXN1-201ENST00000294119 SALL3Q9BXA9 1300 aa18.38■□□□□ 0.53
UBXN1-201ENST00000294119 MMP1P03956 469 aa18.37■□□□□ 0.53
UBXN1-201ENST00000294119 ARHGAP1Q07960 439 aa18.37■□□□□ 0.53
UBXN1-201ENST00000294119 PTPN21Q16825 1174 aa18.37■□□□□ 0.53
UBXN1-201ENST00000294119 GIMAP6Q6P9H5 292 aa18.37■□□□□ 0.53
UBXN1-201ENST00000294119 CLP1Q92989 425 aaKnown RBP18.37■□□□□ 0.53
UBXN1-201ENST00000294119 NKD2Q969F2 451 aaPredicted RBP18.37■□□□□ 0.53
UBXN1-201ENST00000294119 PHF7Q9BWX1 381 aaPredicted RBP18.37■□□□□ 0.53
UBXN1-201ENST00000294119 GSG1L2A8MUP6 293 aa18.36■□□□□ 0.53
UBXN1-201ENST00000294119 CTNNB1P35222 781 aa18.36■□□□□ 0.53
UBXN1-201ENST00000294119 SLC1A4P43007 532 aa18.36■□□□□ 0.53
UBXN1-201ENST00000294119 CHMP4BP1P59074 171 aa18.36■□□□□ 0.53
UBXN1-201ENST00000294119 HIC1Q14526 733 aa18.36■□□□□ 0.53
UBXN1-201ENST00000294119 SLC30A10Q6XR72 485 aa18.36■□□□□ 0.53
UBXN1-201ENST00000294119 NEDD1Q8NHV4 660 aa18.36■□□□□ 0.53
UBXN1-201ENST00000294119 CHD6Q8TD26 2715 aa18.36■□□□□ 0.53
UBXN1-201ENST00000294119 RMDN1Q96DB5 314 aa18.36■□□□□ 0.53
UBXN1-201ENST00000294119 RANBP17Q9H2T7 1088 aaKnown RBP18.36■□□□□ 0.53
UBXN1-201ENST00000294119 PAG1Q9NWQ8 432 aa18.36■□□□□ 0.53
UBXN1-201ENST00000294119 USP15Q9Y4E8 981 aaPredicted RBP18.36■□□□□ 0.53
UBXN1-201ENST00000294119 KDM4AO75164 1064 aa18.35■□□□□ 0.53
UBXN1-201ENST00000294119 F2P00734 622 aa18.35■□□□□ 0.53
UBXN1-201ENST00000294119 PDE4DQ08499 809 aa18.35■□□□□ 0.53
UBXN1-201ENST00000294119 RCSD1Q6JBY9 416 aa18.35■□□□□ 0.53
UBXN1-201ENST00000294119 FRMD5Q7Z6J6 570 aa18.35■□□□□ 0.53
UBXN1-201ENST00000294119 EFHBQ8N7U6 833 aa18.35■□□□□ 0.53
UBXN1-201ENST00000294119 TMEM105Q8N8V8 129 aa18.35■□□□□ 0.53
UBXN1-201ENST00000294119 DNERQ8NFT8 737 aa18.35■□□□□ 0.53
UBXN1-201ENST00000294119 CLEC4DQ8WXI8 215 aa18.35■□□□□ 0.53
UBXN1-201ENST00000294119 SUSD6Q92537 303 aa18.35■□□□□ 0.53
UBXN1-201ENST00000294119 STRBPQ96SI9 672 aaKnown RBP18.35■□□□□ 0.53
UBXN1-201ENST00000294119 BCL11AQ9H165 835 aa18.35■□□□□ 0.53
UBXN1-201ENST00000294119 IGFLR1Q9H665 355 aa18.35■□□□□ 0.53
UBXN1-201ENST00000294119 BAHCC1Q9P281 2608 aa18.34■□□□□ 0.53
UBXN1-201ENST00000294119 RSPH10B2B2RC85 870 aa18.34■□□□□ 0.53
UBXN1-201ENST00000294119 GLP2RO95838 553 aa18.34■□□□□ 0.53
UBXN1-201ENST00000294119 RSPH10BP0C881 870 aa18.34■□□□□ 0.53
UBXN1-201ENST00000294119 ATF7P17544 494 aaPredicted RBP18.34■□□□□ 0.53
UBXN1-201ENST00000294119 CASTP20810 708 aaKnown RBP18.34■□□□□ 0.53
UBXN1-201ENST00000294119 MCCP23508 829 aa18.34■□□□□ 0.53
UBXN1-201ENST00000294119 PSEN2P49810 448 aa18.34■□□□□ 0.53
UBXN1-201ENST00000294119 NDUFV1P49821 464 aa18.34■□□□□ 0.53
UBXN1-201ENST00000294119 ZNF200P98182 395 aaPredicted RBP18.34■□□□□ 0.53
UBXN1-201ENST00000294119 MCTP2Q6DN12 878 aa18.34■□□□□ 0.53
UBXN1-201ENST00000294119 KCTD1Q719H9 257 aa18.34■□□□□ 0.53
UBXN1-201ENST00000294119 SERINC5Q86VE9 423 aa18.34■□□□□ 0.53
UBXN1-201ENST00000294119 STK11IPQ8N1F8 1099 aa18.34■□□□□ 0.53
UBXN1-201ENST00000294119 C7orf31Q8N865 590 aa18.34■□□□□ 0.53
UBXN1-201ENST00000294119 HAUS7Q99871 368 aa18.34■□□□□ 0.53
UBXN1-201ENST00000294119 OSBPL7Q9BZF2 842 aa18.34■□□□□ 0.53
UBXN1-201ENST00000294119 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.34■□□□□ 0.53
UBXN1-201ENST00000294119 INCENPQ9NQS7 918 aa18.34■□□□□ 0.53
UBXN1-201ENST00000294119 RWDD3Q9Y3V2 267 aa18.34■□□□□ 0.53
UBXN1-201ENST00000294119 CEP250Q9BV73 2442 aa18.34■□□□□ 0.53
UBXN1-201ENST00000294119 PRDM1O75626 825 aa18.33■□□□□ 0.52
UBXN1-201ENST00000294119 UPP2O95045 317 aa18.33■□□□□ 0.52
UBXN1-201ENST00000294119 PDE4BQ07343 736 aa18.33■□□□□ 0.52
UBXN1-201ENST00000294119 IKQ13123 557 aaPredicted RBP18.33■□□□□ 0.52
UBXN1-201ENST00000294119 RASGRP2Q7LDG7 609 aa18.33■□□□□ 0.52
UBXN1-201ENST00000294119 TICAM2Q86XR7 235 aa18.33■□□□□ 0.52
UBXN1-201ENST00000294119 ZNF444Q8N0Y2 327 aaPredicted RBP18.33■□□□□ 0.52
UBXN1-201ENST00000294119 FIBCD1Q8N539 461 aa18.33■□□□□ 0.52
UBXN1-201ENST00000294119 OTUD7AQ8TE49 926 aaPredicted RBP18.33■□□□□ 0.52
UBXN1-201ENST00000294119 IL17RAQ96F46 866 aa18.33■□□□□ 0.52
UBXN1-201ENST00000294119 IFIH1Q9BYX4 1025 aaKnown RBP18.33■□□□□ 0.52
UBXN1-201ENST00000294119 BOLA2Q9H3K6 86 aa18.33■□□□□ 0.52
UBXN1-201ENST00000294119 GH1P01241 217 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms