RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 LRRC74AQ0VAA2 488 aa13.44□□□□□ -0.26
SLX4-201ENST00000294008 KIAA1755Q5JYT7 1200 aa13.44□□□□□ -0.26
SLX4-201ENST00000294008 TXLNGQ9NUQ3 528 aa13.44□□□□□ -0.26
SLX4-201ENST00000294008 TPCN1Q9ULQ1 816 aa13.44□□□□□ -0.26
SLX4-201ENST00000294008 PCDHA1Q9Y5I3 950 aa13.44□□□□□ -0.26
SLX4-201ENST00000294008 EPB42P16452 691 aa13.44□□□□□ -0.26
SLX4-201ENST00000294008 AKAP4Q5JQC9 854 aa13.44□□□□□ -0.26
SLX4-201ENST00000294008 TAS2R42Q7RTR8 314 aa13.44□□□□□ -0.26
SLX4-201ENST00000294008 THEM5Q8N1Q8 247 aa13.44□□□□□ -0.26
SLX4-201ENST00000294008 NRBF2Q96F24 287 aa13.44□□□□□ -0.26
SLX4-201ENST00000294008 ZWILCHQ9H900 591 aa13.44□□□□□ -0.26
SLX4-201ENST00000294008 TYW1Q9NV66 732 aaKnown RBP13.44□□□□□ -0.26
SLX4-201ENST00000294008 MTERF2Q49AM1 385 aa13.43□□□□□ -0.26
SLX4-201ENST00000294008 FAM117BQ6P1L5 589 aa13.43□□□□□ -0.26
SLX4-201ENST00000294008 CYTH2Q99418 400 aa13.43□□□□□ -0.26
SLX4-201ENST00000294008 PLCH2O75038 1416 aa13.43□□□□□ -0.26
SLX4-201ENST00000294008 EFHD1Q9BUP0 239 aa13.43□□□□□ -0.26
SLX4-201ENST00000294008 EPRSP07814 1512 aaKnown RBP13.43□□□□□ -0.26
SLX4-201ENST00000294008 TUBB4BP68371 445 aa13.43□□□□□ -0.26
SLX4-201ENST00000294008 DIS3L2Q8IYB7 885 aaKnown RBP13.43□□□□□ -0.26
SLX4-201ENST00000294008 MAML1Q92585 1016 aa13.43□□□□□ -0.26
SLX4-201ENST00000294008 HSPA1AP0DMV8 641 aaKnown RBP13.43□□□□□ -0.26
SLX4-201ENST00000294008 HSPA1BP0DMV9 641 aaKnown RBP13.43□□□□□ -0.26
SLX4-201ENST00000294008 PDE1AP54750 535 aa13.43□□□□□ -0.26
SLX4-201ENST00000294008 ANO1Q5XXA6 986 aa13.43□□□□□ -0.26
SLX4-201ENST00000294008 OR6B3Q8NGW1 331 aa13.43□□□□□ -0.26
SLX4-201ENST00000294008 ZNF215Q9UL58 517 aaPredicted RBP13.43□□□□□ -0.26
SLX4-201ENST00000294008 PCDHA12Q9UN75 941 aa13.43□□□□□ -0.26
SLX4-201ENST00000294008 PRR23D1E9PI22 279 aaPredicted RBP13.43□□□□□ -0.26
SLX4-201ENST00000294008 PRR23D2P0DMB1 279 aaPredicted RBP13.43□□□□□ -0.26
SLX4-201ENST00000294008 FSD1LQ9BXM9 530 aa13.43□□□□□ -0.26
SLX4-201ENST00000294008 L3MBTL1Q9Y468 752 aa13.43□□□□□ -0.26
SLX4-201ENST00000294008 SCINQ9Y6U3 715 aa13.43□□□□□ -0.26
SLX4-201ENST00000294008 PRG4Q92954 1404 aaPredicted RBP13.43□□□□□ -0.26
SLX4-201ENST00000294008 EIF3CLB5ME19 914 aaKnown RBP13.43□□□□□ -0.26
SLX4-201ENST00000294008 FOSP01100 380 aaPredicted RBP13.43□□□□□ -0.26
SLX4-201ENST00000294008 ARHGAP25P42331 645 aa13.43□□□□□ -0.26
SLX4-201ENST00000294008 STX19Q8N4C7 294 aa13.43□□□□□ -0.26
SLX4-201ENST00000294008 TOP2AP11388 1531 aaKnown RBP13.42□□□□□ -0.26
SLX4-201ENST00000294008 KDM3AQ9Y4C1 1321 aa13.42□□□□□ -0.26
SLX4-201ENST00000294008 ARHGAP10A1A4S6 786 aa13.42□□□□□ -0.26
SLX4-201ENST00000294008 ARHGEF9O43307 516 aa13.42□□□□□ -0.26
SLX4-201ENST00000294008 ADRA2BP18089 450 aa13.42□□□□□ -0.26
SLX4-201ENST00000294008 FANCCQ00597 558 aa13.42□□□□□ -0.26
SLX4-201ENST00000294008 PTK2Q05397 1052 aa13.42□□□□□ -0.26
SLX4-201ENST00000294008 TCP11X2Q5H9J9 407 aa13.42□□□□□ -0.26
SLX4-201ENST00000294008 MSH2P43246 934 aa13.42□□□□□ -0.26
SLX4-201ENST00000294008 KRT77Q7Z794 578 aa13.42□□□□□ -0.26
SLX4-201ENST00000294008 GTSE1Q9NYZ3 720 aa13.42□□□□□ -0.26
SLX4-201ENST00000294008 UPP2O95045 317 aa13.42□□□□□ -0.26
SLX4-201ENST00000294008 GNGT1P63211 74 aa13.42□□□□□ -0.26
SLX4-201ENST00000294008 ICA1Q05084 483 aa13.42□□□□□ -0.26
SLX4-201ENST00000294008 ALFQ53S48 1182 aa13.42□□□□□ -0.26
SLX4-201ENST00000294008 ADALQ6DHV7 355 aa13.42□□□□□ -0.26
SLX4-201ENST00000294008 RNF135Q8IUD6 432 aa13.42□□□□□ -0.26
SLX4-201ENST00000294008 FBXO2Q9UK22 296 aaPredicted RBP13.42□□□□□ -0.26
SLX4-201ENST00000294008 GTF2A1LQ9UNN4 478 aa13.42□□□□□ -0.26
SLX4-201ENST00000294008 GPAA1O43292 621 aa13.42□□□□□ -0.26
SLX4-201ENST00000294008 MYO1EQ12965 1108 aa13.42□□□□□ -0.26
SLX4-201ENST00000294008 EEF2KMTQ96G04 330 aa13.42□□□□□ -0.26
SLX4-201ENST00000294008 KMT5AQ9NQR1 393 aa13.42□□□□□ -0.26
SLX4-201ENST00000294008 ADKP55263 362 aaKnown RBP13.42□□□□□ -0.26
SLX4-201ENST00000294008 CUL1Q13616 776 aa13.42□□□□□ -0.26
SLX4-201ENST00000294008 MIGA2Q7L4E1 593 aa13.42□□□□□ -0.26
SLX4-201ENST00000294008 NOSTRINQ8IVI9 506 aa13.42□□□□□ -0.26
SLX4-201ENST00000294008 GPKOWQ92917 476 aaPredicted RBP eCLIP13.42□□□□□ -0.26
SLX4-201ENST00000294008 NEUROD4Q9HD90 331 aa13.42□□□□□ -0.26
SLX4-201ENST00000294008 PPARGC1AQ9UBK2 798 aaKnown RBP13.42□□□□□ -0.26
SLX4-201ENST00000294008 MAN1A2O60476 641 aa13.41□□□□□ -0.26
SLX4-201ENST00000294008 RFX3P48380 749 aa13.41□□□□□ -0.26
SLX4-201ENST00000294008 PDXDC1Q6P996 788 aa13.41□□□□□ -0.26
SLX4-201ENST00000294008 SUN2Q9UH99 717 aa13.41□□□□□ -0.26
SLX4-201ENST00000294008 PDE8AO60658 829 aa13.41□□□□□ -0.26
SLX4-201ENST00000294008 LRRN2O75325 713 aa13.41□□□□□ -0.26
SLX4-201ENST00000294008 PKN3Q6P5Z2 889 aa13.41□□□□□ -0.26
SLX4-201ENST00000294008 MYOCDQ8IZQ8 938 aa13.41□□□□□ -0.26
SLX4-201ENST00000294008 URGCPQ8TCY9 931 aa13.41□□□□□ -0.26
SLX4-201ENST00000294008 PCDH11XQ9BZA7 1347 aa13.41□□□□□ -0.26
SLX4-201ENST00000294008 PCDH11YQ9BZA8 1340 aa13.41□□□□□ -0.26
SLX4-201ENST00000294008 UBA6A0AVT1 1052 aaPredicted RBP13.41□□□□□ -0.26
SLX4-201ENST00000294008 LMNB2Q03252 620 aa13.41□□□□□ -0.26
SLX4-201ENST00000294008 SLC39A2Q9NP94 309 aa13.41□□□□□ -0.26
SLX4-201ENST00000294008 HOMER3Q9NSC5 361 aa13.41□□□□□ -0.26
SLX4-201ENST00000294008 THEGQ9P2T0 379 aa13.41□□□□□ -0.26
SLX4-201ENST00000294008 PPP3CCP48454 512 aa13.41□□□□□ -0.26
SLX4-201ENST00000294008 GRIN1Q05586 938 aa13.41□□□□□ -0.26
SLX4-201ENST00000294008 RALGDSQ12967 914 aa13.41□□□□□ -0.26
SLX4-201ENST00000294008 ASZ1Q8WWH4 475 aa13.41□□□□□ -0.26
SLX4-201ENST00000294008 NT5C3AQ9H0P0 336 aa13.41□□□□□ -0.26
SLX4-201ENST00000294008 MAPK4P31152 587 aa13.41□□□□□ -0.26
SLX4-201ENST00000294008 PNOCQ13519 176 aa13.41□□□□□ -0.26
SLX4-201ENST00000294008 POSTNQ15063 836 aa13.41□□□□□ -0.26
SLX4-201ENST00000294008 ARL13BQ3SXY8 428 aa13.41□□□□□ -0.26
SLX4-201ENST00000294008 MCM8Q9UJA3 840 aa13.41□□□□□ -0.26
SLX4-201ENST00000294008 AQRO60306 1485 aaKnown RBP eCLIP13.41□□□□□ -0.26
SLX4-201ENST00000294008 TTI1O43156 1089 aa13.41□□□□□ -0.26
SLX4-201ENST00000294008 PRPSAP2O60256 369 aa13.41□□□□□ -0.26
SLX4-201ENST00000294008 HNRNPCP07910 306 aaKnown RBP eCLIP13.41□□□□□ -0.26
SLX4-201ENST00000294008 TMEM161AQ9NX61 479 aa13.41□□□□□ -0.26
SLX4-201ENST00000294008 PJA2O43164 708 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms