RNA–Protein interactions for RNA: ENST00000290378.4

ACTC1-201, Transcript of actin, alpha, cardiac muscle 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTC1, Length 4,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTC1-201ENST00000290378 TRIML1Q8N9V2 468 aa12.08□□□□□ -0.48
ACTC1-201ENST00000290378 SGSM3Q96HU1 749 aa12.08□□□□□ -0.48
ACTC1-201ENST00000290378 RPGRIP1Q96KN7 1286 aa12.08□□□□□ -0.48
ACTC1-201ENST00000290378 SLC40A1Q9NP59 571 aa12.08□□□□□ -0.48
ACTC1-201ENST00000290378 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.08□□□□□ -0.48
ACTC1-201ENST00000290378 ATP8A2Q9NTI2 1148 aa12.08□□□□□ -0.48
ACTC1-201ENST00000290378 ABCC12Q96J65 1359 aa12.08□□□□□ -0.48
ACTC1-201ENST00000290378 RNF225M0QZC1 329 aaPredicted RBP12.08□□□□□ -0.48
ACTC1-201ENST00000290378 SMIM24O75264 130 aa12.08□□□□□ -0.48
ACTC1-201ENST00000290378 ZBTB7AO95365 584 aa12.08□□□□□ -0.48
ACTC1-201ENST00000290378 SLC1A4P43007 532 aa12.08□□□□□ -0.48
ACTC1-201ENST00000290378 TNNC1P63316 161 aa12.08□□□□□ -0.48
ACTC1-201ENST00000290378 SWT1Q5T5J6 900 aaKnown RBP12.08□□□□□ -0.48
ACTC1-201ENST00000290378 TMEM139Q8IV31 216 aa12.08□□□□□ -0.48
ACTC1-201ENST00000290378 PARP9Q8IXQ6 854 aa12.08□□□□□ -0.48
ACTC1-201ENST00000290378 FNBP4Q8N3X1 1017 aaPredicted RBP12.08□□□□□ -0.48
ACTC1-201ENST00000290378 ZNF473Q8WTR7 871 aaKnown RBP12.08□□□□□ -0.48
ACTC1-201ENST00000290378 NBPF3Q9H094 633 aa12.08□□□□□ -0.48
ACTC1-201ENST00000290378 ATP8A1Q9Y2Q0 1164 aa12.08□□□□□ -0.48
ACTC1-201ENST00000290378 SLIT3O75094 1523 aa12.08□□□□□ -0.48
ACTC1-201ENST00000290378 CALML3P27482 149 aa12.08□□□□□ -0.48
ACTC1-201ENST00000290378 TBC1D22AQ8WUA7 517 aa12.08□□□□□ -0.48
ACTC1-201ENST00000290378 NSUN4Q96CB9 384 aaKnown RBP12.08□□□□□ -0.48
ACTC1-201ENST00000290378 GOLPH3Q9H4A6 298 aa12.08□□□□□ -0.48
ACTC1-201ENST00000290378 C6orf50Q9HD87 102 aa12.08□□□□□ -0.48
ACTC1-201ENST00000290378 TNS2Q63HR2 1409 aa12.07□□□□□ -0.48
ACTC1-201ENST00000290378 CAND2O75155 1236 aa12.07□□□□□ -0.48
ACTC1-201ENST00000290378 RANBP1P43487 201 aa12.07□□□□□ -0.48
ACTC1-201ENST00000290378 KIAA0753Q2KHM9 967 aa12.07□□□□□ -0.48
ACTC1-201ENST00000290378 GSDMAQ96QA5 445 aa12.07□□□□□ -0.48
ACTC1-201ENST00000290378 MYO1AQ9UBC5 1043 aa12.07□□□□□ -0.48
ACTC1-201ENST00000290378 ADAMTSL3P82987 1691 aa12.07□□□□□ -0.48
ACTC1-201ENST00000290378 MKRN4PQ13434 485 aaPredicted RBP12.07□□□□□ -0.48
ACTC1-201ENST00000290378 TTLL12Q14166 644 aaPredicted RBP12.07□□□□□ -0.48
ACTC1-201ENST00000290378 LRRC41Q15345 812 aa12.07□□□□□ -0.48
ACTC1-201ENST00000290378 CCDC6Q16204 474 aa12.07□□□□□ -0.48
ACTC1-201ENST00000290378 ZNF772Q68DY9 489 aaPredicted RBP12.07□□□□□ -0.48
ACTC1-201ENST00000290378 KCNV1Q6PIU1 500 aa12.07□□□□□ -0.48
ACTC1-201ENST00000290378 EGFL6Q8IUX8 553 aa12.07□□□□□ -0.48
ACTC1-201ENST00000290378 BMP2KQ9NSY1 1161 aaPredicted RBP12.07□□□□□ -0.48
ACTC1-201ENST00000290378 RAB21Q9UL25 225 aa12.07□□□□□ -0.48
ACTC1-201ENST00000290378 TMEM266Q2M3C6 531 aa12.07□□□□□ -0.48
ACTC1-201ENST00000290378 KCTD1Q719H9 257 aa12.07□□□□□ -0.48
ACTC1-201ENST00000290378 CNOT6LQ96LI5 555 aaKnown RBP12.07□□□□□ -0.48
ACTC1-201ENST00000290378 ELAC2Q9BQ52 826 aaKnown RBP12.07□□□□□ -0.48
ACTC1-201ENST00000290378 ALDH8A1Q9H2A2 487 aaPredicted RBP12.07□□□□□ -0.48
ACTC1-201ENST00000290378 SRPRBQ9Y5M8 271 aaKnown RBP12.07□□□□□ -0.48
ACTC1-201ENST00000290378 PDE2AO00408 941 aaPredicted RBP12.06□□□□□ -0.48
ACTC1-201ENST00000290378 PPP1R37O75864 691 aa12.06□□□□□ -0.48
ACTC1-201ENST00000290378 SNAP25P60880 206 aa12.06□□□□□ -0.48
ACTC1-201ENST00000290378 FAM114A1Q8IWE2 563 aa12.06□□□□□ -0.48
ACTC1-201ENST00000290378 CCDC13Q8IYE1 715 aa12.06□□□□□ -0.48
ACTC1-201ENST00000290378 CPXCR1Q8N123 301 aa12.06□□□□□ -0.48
ACTC1-201ENST00000290378 MB21D1Q8N884 522 aa12.06□□□□□ -0.48
ACTC1-201ENST00000290378 HSD3B7Q9H2F3 369 aa12.06□□□□□ -0.48
ACTC1-201ENST00000290378 LRRC4BQ9NT99 713 aa12.06□□□□□ -0.48
ACTC1-201ENST00000290378 HDAC9Q9UKV0 1011 aa12.06□□□□□ -0.48
ACTC1-201ENST00000290378 BAG6P46379 1132 aa12.06□□□□□ -0.48
ACTC1-201ENST00000290378 DNM2P50570 870 aa12.06□□□□□ -0.48
ACTC1-201ENST00000290378 CAPRIN2Q6IMN6 1127 aaKnown RBP12.06□□□□□ -0.48
ACTC1-201ENST00000290378 DEFB132Q7Z7B7 95 aa12.06□□□□□ -0.48
ACTC1-201ENST00000290378 RBM12Q9NTZ6 932 aaKnown RBP12.06□□□□□ -0.48
ACTC1-201ENST00000290378 TOPAZ1Q8N9V7 1692 aa12.06□□□□□ -0.48
ACTC1-201ENST00000290378 SCG2P13521 617 aa12.06□□□□□ -0.48
ACTC1-201ENST00000290378 TCP1P17987 556 aaKnown RBP12.06□□□□□ -0.48
ACTC1-201ENST00000290378 ERFP50548 548 aa12.06□□□□□ -0.48
ACTC1-201ENST00000290378 PTPAQ15257 358 aa12.06□□□□□ -0.48
ACTC1-201ENST00000290378 CALML4Q96GE6 196 aa12.06□□□□□ -0.48
ACTC1-201ENST00000290378 SPATA31A6Q5VVP1 1343 aa12.05□□□□□ -0.48
ACTC1-201ENST00000290378 SMCO2A6NFE2 343 aa12.05□□□□□ -0.48
ACTC1-201ENST00000290378 LGR5O75473 907 aa12.05□□□□□ -0.48
ACTC1-201ENST00000290378 POLE2P56282 527 aa12.05□□□□□ -0.48
ACTC1-201ENST00000290378 SP4Q02446 784 aa12.05□□□□□ -0.48
ACTC1-201ENST00000290378 EVX2Q03828 476 aa12.05□□□□□ -0.48
ACTC1-201ENST00000290378 GFPT1Q06210 699 aaPredicted RBP12.05□□□□□ -0.48
ACTC1-201ENST00000290378 DNAAF5Q86Y56 855 aa12.05□□□□□ -0.48
ACTC1-201ENST00000290378 OSBPL9Q96SU4 736 aa12.05□□□□□ -0.48
ACTC1-201ENST00000290378 FBXO2Q9UK22 296 aaPredicted RBP12.05□□□□□ -0.48
ACTC1-201ENST00000290378 KIF1AQ12756 1690 aa12.05□□□□□ -0.48
ACTC1-201ENST00000290378 H7C1D1 291 aa12.05□□□□□ -0.48
ACTC1-201ENST00000290378 IFNAR1P17181 557 aa12.05□□□□□ -0.48
ACTC1-201ENST00000290378 SLC8A1P32418 973 aa12.05□□□□□ -0.48
ACTC1-201ENST00000290378 MAGOHP61326 146 aaKnown RBP12.05□□□□□ -0.48
ACTC1-201ENST00000290378 MXRA7P84157 204 aa12.05□□□□□ -0.48
ACTC1-201ENST00000290378 SNX1Q13596 522 aa12.05□□□□□ -0.48
ACTC1-201ENST00000290378 RPS6KA1Q15418 735 aa12.05□□□□□ -0.48
ACTC1-201ENST00000290378 TSEN2Q8NCE0 465 aaKnown RBP12.05□□□□□ -0.48
ACTC1-201ENST00000290378 MDM1Q8TC05 714 aa12.05□□□□□ -0.48
ACTC1-201ENST00000290378 MAGOHBQ96A72 148 aaKnown RBP12.05□□□□□ -0.48
ACTC1-201ENST00000290378 COA7Q96BR5 231 aa12.05□□□□□ -0.48
ACTC1-201ENST00000290378 TSG101Q99816 390 aa12.05□□□□□ -0.48
ACTC1-201ENST00000290378 TSGA10Q9BZW7 698 aa12.05□□□□□ -0.48
ACTC1-201ENST00000290378 HOMER2Q9NSB8 354 aa12.05□□□□□ -0.48
ACTC1-201ENST00000290378 PCDHA13Q9Y5I0 950 aa12.05□□□□□ -0.48
ACTC1-201ENST00000290378 H0Y3Z8 333 aa12.05□□□□□ -0.48
ACTC1-201ENST00000290378 FGFR1OPO95684 399 aaKnown RBP12.05□□□□□ -0.48
ACTC1-201ENST00000290378 PDHA1P08559 390 aa12.05□□□□□ -0.48
ACTC1-201ENST00000290378 GYS1P13807 737 aa12.05□□□□□ -0.48
ACTC1-201ENST00000290378 AOC3Q16853 763 aa12.05□□□□□ -0.48
ACTC1-201ENST00000290378 MIGA2Q7L4E1 593 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms