RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 SCFD2Q8WU76 684 aa17.49■□□□□ 0.39
NCK1-201ENST00000288986 WDR11Q9BZH6 1224 aa17.49■□□□□ 0.39
NCK1-201ENST00000288986 MKI67P46013 3256 aaKnown RBP17.48■□□□□ 0.39
NCK1-201ENST00000288986 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.48■□□□□ 0.39
NCK1-201ENST00000288986 MSCO60682 206 aa17.48■□□□□ 0.39
NCK1-201ENST00000288986 RGS20O76081 388 aa17.48■□□□□ 0.39
NCK1-201ENST00000288986 NCLP19338 710 aaKnown RBP17.48■□□□□ 0.39
NCK1-201ENST00000288986 IQSEC1Q6DN90 963 aa17.48■□□□□ 0.39
NCK1-201ENST00000288986 CFAP45Q9UL16 551 aa17.48■□□□□ 0.39
NCK1-201ENST00000288986 MRVI1Q9Y6F6 885 aa17.48■□□□□ 0.39
NCK1-201ENST00000288986 GADD45BO75293 160 aaPredicted RBP17.47■□□□□ 0.39
NCK1-201ENST00000288986 GJB1P08034 283 aa17.47■□□□□ 0.39
NCK1-201ENST00000288986 TXNP10599 105 aaKnown RBP17.47■□□□□ 0.39
NCK1-201ENST00000288986 RARBP10826 455 aa17.47■□□□□ 0.39
NCK1-201ENST00000288986 UBE2HP62256 183 aa17.47■□□□□ 0.39
NCK1-201ENST00000288986 TTLL4Q14679 1199 aa17.47■□□□□ 0.39
NCK1-201ENST00000288986 INF2Q27J81 1249 aa17.47■□□□□ 0.39
NCK1-201ENST00000288986 LEO1Q8WVC0 666 aaPredicted RBP17.47■□□□□ 0.39
NCK1-201ENST00000288986 LENG1Q96BZ8 264 aaPredicted RBP17.47■□□□□ 0.39
NCK1-201ENST00000288986 SMPD1P17405 629 aa17.47■□□□□ 0.39
NCK1-201ENST00000288986 TMEM63BQ5T3F8 832 aa17.47■□□□□ 0.39
NCK1-201ENST00000288986 MYSM1Q5VVJ2 828 aa17.47■□□□□ 0.39
NCK1-201ENST00000288986 NLRX1Q86UT6 975 aa17.47■□□□□ 0.39
NCK1-201ENST00000288986 U2AF1L4Q8WU68 220 aaKnown RBP17.47■□□□□ 0.39
NCK1-201ENST00000288986 ZNF396Q96N95 335 aaPredicted RBP17.47■□□□□ 0.39
NCK1-201ENST00000288986 INPP4AQ96PE3 977 aaPredicted RBP17.47■□□□□ 0.39
NCK1-201ENST00000288986 TFIP11Q9UBB9 837 aaKnown RBP17.47■□□□□ 0.39
NCK1-201ENST00000288986 RBM47A0AV96 593 aaKnown RBP17.46■□□□□ 0.39
NCK1-201ENST00000288986 ADCY6O43306 1168 aa17.46■□□□□ 0.39
NCK1-201ENST00000288986 SGPL1O95470 568 aa17.46■□□□□ 0.39
NCK1-201ENST00000288986 MYCNP04198 464 aaPredicted RBP17.46■□□□□ 0.39
NCK1-201ENST00000288986 CYP3A4P08684 503 aa17.46■□□□□ 0.39
NCK1-201ENST00000288986 ITGB5P18084 799 aa17.46■□□□□ 0.39
NCK1-201ENST00000288986 LY6KQ17RY6 165 aa17.46■□□□□ 0.39
NCK1-201ENST00000288986 CEP55Q53EZ4 464 aa17.46■□□□□ 0.39
NCK1-201ENST00000288986 EARS2Q5JPH6 523 aaKnown RBP17.46■□□□□ 0.39
NCK1-201ENST00000288986 LHX8Q68G74 356 aa17.46■□□□□ 0.39
NCK1-201ENST00000288986 KCNV1Q6PIU1 500 aa17.46■□□□□ 0.39
NCK1-201ENST00000288986 CYP2W1Q8TAV3 490 aa17.46■□□□□ 0.39
NCK1-201ENST00000288986 CRYGNQ8WXF5 182 aa17.46■□□□□ 0.39
NCK1-201ENST00000288986 USP28Q96RU2 1077 aa17.46■□□□□ 0.39
NCK1-201ENST00000288986 MXRA8Q9BRK3 442 aa17.46■□□□□ 0.39
NCK1-201ENST00000288986 FOXP1Q9H334 677 aaPredicted RBP17.46■□□□□ 0.39
NCK1-201ENST00000288986 RCOR1Q9UKL0 485 aa17.46■□□□□ 0.39
NCK1-201ENST00000288986 ARIH2O95376 493 aa17.45■□□□□ 0.38
NCK1-201ENST00000288986 TFRCP02786 760 aaKnown RBP17.45■□□□□ 0.38
NCK1-201ENST00000288986 USP11P51784 963 aa17.45■□□□□ 0.38
NCK1-201ENST00000288986 MTMR1Q13613 665 aa17.45■□□□□ 0.38
NCK1-201ENST00000288986 DUSP28Q4G0W2 176 aa17.45■□□□□ 0.38
NCK1-201ENST00000288986 GJC2Q5T442 439 aaPredicted RBP17.45■□□□□ 0.38
NCK1-201ENST00000288986 TNFRSF25Q93038 417 aa17.45■□□□□ 0.38
NCK1-201ENST00000288986 JADE2Q9NQC1 790 aa17.45■□□□□ 0.38
NCK1-201ENST00000288986 UBIAD1Q9Y5Z9 338 aa17.45■□□□□ 0.38
NCK1-201ENST00000288986 FAM205CA6NFA0 338 aa17.45■□□□□ 0.38
NCK1-201ENST00000288986 FAM86B1E9PN63 330 aa17.45■□□□□ 0.38
NCK1-201ENST00000288986 DUSP11O75319 330 aaKnown RBP17.45■□□□□ 0.38
NCK1-201ENST00000288986 FAM86B2P0C5J1 330 aa17.45■□□□□ 0.38
NCK1-201ENST00000288986 TGFB3P10600 412 aa17.45■□□□□ 0.38
NCK1-201ENST00000288986 PTGS1P23219 599 aa17.45■□□□□ 0.38
NCK1-201ENST00000288986 GJA8P48165 433 aa17.45■□□□□ 0.38
NCK1-201ENST00000288986 LETM2Q2VYF4 491 aa17.45■□□□□ 0.38
NCK1-201ENST00000288986 NEK8Q86SG6 692 aa17.45■□□□□ 0.38
NCK1-201ENST00000288986 SPATA32Q96LK8 384 aa17.45■□□□□ 0.38
NCK1-201ENST00000288986 XPNPEP3Q9NQH7 507 aa17.45■□□□□ 0.38
NCK1-201ENST00000288986 DDX41Q9UJV9 622 aaKnown RBP17.45■□□□□ 0.38
NCK1-201ENST00000288986 GNEQ9Y223 722 aaKnown RBP17.45■□□□□ 0.38
NCK1-201ENST00000288986 KIAA0100Q14667 2235 aaKnown RBP17.44■□□□□ 0.38
NCK1-201ENST00000288986 MAFGO15525 162 aa17.44■□□□□ 0.38
NCK1-201ENST00000288986 DYNC1LI2O43237 492 aaPredicted RBP17.44■□□□□ 0.38
NCK1-201ENST00000288986 PGK1P00558 417 aa17.44■□□□□ 0.38
NCK1-201ENST00000288986 CCDC62Q6P9F0 684 aa17.44■□□□□ 0.38
NCK1-201ENST00000288986 NOSTRINQ8IVI9 506 aa17.44■□□□□ 0.38
NCK1-201ENST00000288986 COPS5Q92905 334 aa17.44■□□□□ 0.38
NCK1-201ENST00000288986 GPRASP2Q96D09 838 aa17.44■□□□□ 0.38
NCK1-201ENST00000288986 CDHR1Q96JP9 859 aa17.44■□□□□ 0.38
NCK1-201ENST00000288986 KCNH7Q9NS40 1196 aa17.44■□□□□ 0.38
NCK1-201ENST00000288986 POLR3EQ9NVU0 708 aa17.44■□□□□ 0.38
NCK1-201ENST00000288986 POTEFA5A3E0 1075 aa17.43■□□□□ 0.38
NCK1-201ENST00000288986 SPATA31C2B4DYI2 1134 aa17.43■□□□□ 0.38
NCK1-201ENST00000288986 ICAM3P32942 547 aa17.43■□□□□ 0.38
NCK1-201ENST00000288986 NASPP49321 788 aaPredicted RBP17.43■□□□□ 0.38
NCK1-201ENST00000288986 GSE1Q14687 1217 aa17.43■□□□□ 0.38
NCK1-201ENST00000288986 PRR16Q569H4 304 aa17.43■□□□□ 0.38
NCK1-201ENST00000288986 TLK2Q86UE8 772 aa17.43■□□□□ 0.38
NCK1-201ENST00000288986 SPC25Q9HBM1 224 aa17.43■□□□□ 0.38
NCK1-201ENST00000288986 DNAH12Q6ZR08 3092 aa17.43■□□□□ 0.38
NCK1-201ENST00000288986 MEIS1O00470 390 aa17.43■□□□□ 0.38
NCK1-201ENST00000288986 NKRFO15226 690 aaKnown RBP eCLIP17.43■□□□□ 0.38
NCK1-201ENST00000288986 EDIL3O43854 480 aa17.43■□□□□ 0.38
NCK1-201ENST00000288986 SORBS3O60504 671 aa17.43■□□□□ 0.38
NCK1-201ENST00000288986 CCNT1O60563 726 aaKnown RBP17.43■□□□□ 0.38
NCK1-201ENST00000288986 CIITAP33076 1130 aa17.43■□□□□ 0.38
NCK1-201ENST00000288986 SP2Q02086 613 aa17.43■□□□□ 0.38
NCK1-201ENST00000288986 PLA2G4DQ86XP0 818 aa17.43■□□□□ 0.38
NCK1-201ENST00000288986 AP5M1Q9H0R1 490 aa17.43■□□□□ 0.38
NCK1-201ENST00000288986 PKD2L1Q9P0L9 805 aa17.43■□□□□ 0.38
NCK1-201ENST00000288986 YEATS4O95619 227 aa17.42■□□□□ 0.38
NCK1-201ENST00000288986 C6orf222P0C671 652 aaPredicted RBP17.42■□□□□ 0.38
NCK1-201ENST00000288986 ARP10275 920 aa17.42■□□□□ 0.38
NCK1-201ENST00000288986 ATP2B1P20020 1258 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms