RNA–Protein interactions for RNA: ENST00000287543.4

MALSU1-201, Transcript of mitochondrial assembly of ribosomal large subunit 1, humanhuman

TSL 2

Gene MALSU1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALSU1-201ENST00000287543 ZSWIM6Q9HCJ5 1215 aa21.73■■□□□ 1.07
MALSU1-201ENST00000287543 FAM217BQ9NTX9 383 aaPredicted RBP21.73■■□□□ 1.07
MALSU1-201ENST00000287543 HOXD8P13378 290 aaPredicted RBP21.72■■□□□ 1.07
MALSU1-201ENST00000287543 UBA1P22314 1058 aaKnown RBP21.72■■□□□ 1.07
MALSU1-201ENST00000287543 EVCP57679 992 aa21.72■■□□□ 1.07
MALSU1-201ENST00000287543 WWC2Q6AWC2 1192 aa21.72■■□□□ 1.07
MALSU1-201ENST00000287543 PSRC1Q6PGN9 363 aaPredicted RBP21.72■■□□□ 1.07
MALSU1-201ENST00000287543 RPUSD2Q8IZ73 545 aaKnown RBP21.72■■□□□ 1.07
MALSU1-201ENST00000287543 SENP7Q9BQF6 1050 aa21.72■■□□□ 1.07
MALSU1-201ENST00000287543 RIC8AQ9NPQ8 531 aa21.72■■□□□ 1.07
MALSU1-201ENST00000287543 BARHL2Q9NY43 387 aa21.72■■□□□ 1.07
MALSU1-201ENST00000287543 NOD1Q9Y239 953 aa21.72■■□□□ 1.07
MALSU1-201ENST00000287543 MAFGO15525 162 aa21.71■■□□□ 1.07
MALSU1-201ENST00000287543 CSF2RAP15509 400 aa21.71■■□□□ 1.07
MALSU1-201ENST00000287543 CDC27P30260 824 aa21.71■■□□□ 1.07
MALSU1-201ENST00000287543 CYP2C18P33260 490 aa21.71■■□□□ 1.07
MALSU1-201ENST00000287543 ADD1P35611 737 aaKnown RBP21.71■■□□□ 1.07
MALSU1-201ENST00000287543 EPHB4P54760 987 aa21.71■■□□□ 1.07
MALSU1-201ENST00000287543 SMAD3P84022 425 aaKnown RBP21.71■■□□□ 1.07
MALSU1-201ENST00000287543 AKAP17AQ02040 695 aaKnown RBP21.71■■□□□ 1.07
MALSU1-201ENST00000287543 MCTP2Q6DN12 878 aa21.71■■□□□ 1.07
MALSU1-201ENST00000287543 FAM109BQ6ICB4 259 aaPredicted RBP21.71■■□□□ 1.07
MALSU1-201ENST00000287543 METTL7BQ6UX53 244 aa21.71■■□□□ 1.07
MALSU1-201ENST00000287543 C7orf31Q8N865 590 aa21.71■■□□□ 1.07
MALSU1-201ENST00000287543 RETREG2Q8NC44 543 aa21.71■■□□□ 1.07
MALSU1-201ENST00000287543 CCDC12Q8WUD4 166 aaPredicted RBP21.71■■□□□ 1.07
MALSU1-201ENST00000287543 GPKOWQ92917 476 aaPredicted RBP eCLIP21.71■■□□□ 1.07
MALSU1-201ENST00000287543 GPRASP2Q96D09 838 aa21.71■■□□□ 1.07
MALSU1-201ENST00000287543 MTIF3Q9H2K0 278 aaKnown RBP21.71■■□□□ 1.07
MALSU1-201ENST00000287543 IL23AQ9NPF7 189 aa21.71■■□□□ 1.07
MALSU1-201ENST00000287543 TRMT13Q9NUP7 481 aaKnown RBP21.71■■□□□ 1.07
MALSU1-201ENST00000287543 RTEL1Q9NZ71 1219 aa21.71■■□□□ 1.07
MALSU1-201ENST00000287543 PCDHA6Q9UN73 950 aa21.71■■□□□ 1.07
MALSU1-201ENST00000287543 PCDHA8Q9Y5H6 950 aa21.71■■□□□ 1.07
MALSU1-201ENST00000287543 TRIOBPQ9H2D6 2365 aa21.71■■□□□ 1.07
MALSU1-201ENST00000287543 NOP56O00567 594 aaKnown RBP21.7■■□□□ 1.06
MALSU1-201ENST00000287543 F2P00734 622 aa21.7■■□□□ 1.06
MALSU1-201ENST00000287543 PSEN2P49810 448 aa21.7■■□□□ 1.06
MALSU1-201ENST00000287543 ADCY7P51828 1080 aa21.7■■□□□ 1.06
MALSU1-201ENST00000287543 CHMP4BP1P59074 171 aa21.7■■□□□ 1.06
MALSU1-201ENST00000287543 SP2Q02086 613 aa21.7■■□□□ 1.06
MALSU1-201ENST00000287543 BFSP2Q13515 415 aa21.7■■□□□ 1.06
MALSU1-201ENST00000287543 PFKFB3Q16875 520 aaPredicted RBP21.7■■□□□ 1.06
MALSU1-201ENST00000287543 HSDL1Q3SXM5 330 aa21.7■■□□□ 1.06
MALSU1-201ENST00000287543 CCDC155Q8N6L0 562 aa21.7■■□□□ 1.06
MALSU1-201ENST00000287543 KAT2BQ92831 832 aa21.7■■□□□ 1.06
MALSU1-201ENST00000287543 NID2Q14112 1375 aa21.7■■□□□ 1.06
MALSU1-201ENST00000287543 SMCO2A6NFE2 343 aa21.69■■□□□ 1.06
MALSU1-201ENST00000287543 STXBP3O00186 592 aa21.69■■□□□ 1.06
MALSU1-201ENST00000287543 PRPF3O43395 683 aaKnown RBP21.69■■□□□ 1.06
MALSU1-201ENST00000287543 PFKMP08237 780 aa21.69■■□□□ 1.06
MALSU1-201ENST00000287543 MFSD10Q14728 455 aa21.69■■□□□ 1.06
MALSU1-201ENST00000287543 ZFP91Q96JP5 570 aaPredicted RBP21.69■■□□□ 1.06
MALSU1-201ENST00000287543 RANBP2P49792 3224 aaKnown RBP21.68■■□□□ 1.06
MALSU1-201ENST00000287543 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.68■■□□□ 1.06
MALSU1-201ENST00000287543 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.68■■□□□ 1.06
MALSU1-201ENST00000287543 HAS3O00219 553 aa21.68■■□□□ 1.06
MALSU1-201ENST00000287543 PITPNM1O00562 1244 aa21.68■■□□□ 1.06
MALSU1-201ENST00000287543 SCG2P13521 617 aa21.68■■□□□ 1.06
MALSU1-201ENST00000287543 RFC2P35250 354 aa21.68■■□□□ 1.06
MALSU1-201ENST00000287543 AP3B2Q13367 1082 aa21.68■■□□□ 1.06
MALSU1-201ENST00000287543 PTGISQ16647 500 aa21.68■■□□□ 1.06
MALSU1-201ENST00000287543 UBE2SQ16763 222 aa21.68■■□□□ 1.06
MALSU1-201ENST00000287543 TMEM240Q5SV17 173 aa21.68■■□□□ 1.06
MALSU1-201ENST00000287543 DEFB123Q8N688 67 aa21.68■■□□□ 1.06
MALSU1-201ENST00000287543 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.68■■□□□ 1.063e-10■■□□□ 11.9
MALSU1-201ENST00000287543 DNAH12Q6ZR08 3092 aa21.67■■□□□ 1.06
MALSU1-201ENST00000287543 FGBP02675 491 aa21.67■■□□□ 1.06
MALSU1-201ENST00000287543 CYP2C9P11712 490 aa21.67■■□□□ 1.06
MALSU1-201ENST00000287543 PDIA3P30101 505 aaKnown RBP21.67■■□□□ 1.06
MALSU1-201ENST00000287543 CCL23P55773 120 aa21.67■■□□□ 1.06
MALSU1-201ENST00000287543 ANAPC15P60006 121 aa21.67■■□□□ 1.06
MALSU1-201ENST00000287543 KIAA0753Q2KHM9 967 aa21.67■■□□□ 1.06
MALSU1-201ENST00000287543 CYFIP1Q7L576 1253 aa21.67■■□□□ 1.06
MALSU1-201ENST00000287543 CAGE1Q8TC20 777 aa21.67■■□□□ 1.06
MALSU1-201ENST00000287543 ZNF274Q96GC6 653 aaPredicted RBP21.67■■□□□ 1.06
MALSU1-201ENST00000287543 JADE2Q9NQC1 790 aa21.67■■□□□ 1.06
MALSU1-201ENST00000287543 GTF2IRD1Q9UHL9 959 aa21.67■■□□□ 1.06
MALSU1-201ENST00000287543 UBIAD1Q9Y5Z9 338 aa21.67■■□□□ 1.06
MALSU1-201ENST00000287543 ESYT2A0FGR8 921 aa21.66■■□□□ 1.06
MALSU1-201ENST00000287543 IFNAR1P17181 557 aa21.66■■□□□ 1.06
MALSU1-201ENST00000287543 SEMA3FQ13275 785 aa21.66■■□□□ 1.06
MALSU1-201ENST00000287543 MTMR1Q13613 665 aa21.66■■□□□ 1.06
MALSU1-201ENST00000287543 ZNF365Q70YC5 407 aa21.66■■□□□ 1.06
MALSU1-201ENST00000287543 C16orf59Q7L2K0 433 aa21.66■■□□□ 1.06
MALSU1-201ENST00000287543 ALG1Q9BT22 464 aa21.66■■□□□ 1.06
MALSU1-201ENST00000287543 RNF26Q9BY78 433 aaPredicted RBP21.66■■□□□ 1.06
MALSU1-201ENST00000287543 C6orf50Q9HD87 102 aa21.66■■□□□ 1.06
MALSU1-201ENST00000287543 PARNO95453 639 aaKnown RBP21.65■■□□□ 1.06
MALSU1-201ENST00000287543 ZNF286BP0CG31 522 aa21.65■■□□□ 1.06
MALSU1-201ENST00000287543 GNA11P29992 359 aa21.65■■□□□ 1.06
MALSU1-201ENST00000287543 TYW1BQ6NUM6 668 aa21.65■■□□□ 1.06
MALSU1-201ENST00000287543 CPLX2Q6PUV4 134 aaKnown RBP21.65■■□□□ 1.06
MALSU1-201ENST00000287543 HERVK_113Q902F9 699 aa21.65■■□□□ 1.06
MALSU1-201ENST00000287543 GPR20Q99678 358 aa21.65■■□□□ 1.06
MALSU1-201ENST00000287543 C16orf70Q9BSU1 422 aa21.65■■□□□ 1.06
MALSU1-201ENST00000287543 WNT8AQ9H1J5 351 aa21.65■■□□□ 1.06
MALSU1-201ENST00000287543 PDRG1Q9NUG6 133 aa21.65■■□□□ 1.06
MALSU1-201ENST00000287543 HDAC6Q9UBN7 1215 aa21.65■■□□□ 1.06
MALSU1-201ENST00000287543 ZNF215Q9UL58 517 aaPredicted RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms