RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 RSPH10B2B2RC85 870 aa6.72□□□□□ -1.33
TNFSF4-201ENST00000281834 PLEKP08567 350 aaPredicted RBP6.72□□□□□ -1.33
TNFSF4-201ENST00000281834 RSPH10BP0C881 870 aa6.72□□□□□ -1.33
TNFSF4-201ENST00000281834 COASYQ13057 564 aa6.72□□□□□ -1.33
TNFSF4-201ENST00000281834 KCNB1Q14721 858 aa6.72□□□□□ -1.33
TNFSF4-201ENST00000281834 CACNA2D4Q7Z3S7 1137 aa6.72□□□□□ -1.33
TNFSF4-201ENST00000281834 SUPT20HQ8NEM7 779 aa6.72□□□□□ -1.33
TNFSF4-201ENST00000281834 OR8K1Q8NGG5 319 aa6.72□□□□□ -1.33
TNFSF4-201ENST00000281834 DCAF4Q8WV16 495 aa6.72□□□□□ -1.33
TNFSF4-201ENST00000281834 C7orf43Q8WVR3 580 aa6.72□□□□□ -1.33
TNFSF4-201ENST00000281834 ERO1AQ96HE7 468 aa6.72□□□□□ -1.33
TNFSF4-201ENST00000281834 EHD4Q9H223 541 aa6.72□□□□□ -1.33
TNFSF4-201ENST00000281834 CTDP1Q9Y5B0 961 aaPredicted RBP6.72□□□□□ -1.33
TNFSF4-201ENST00000281834 hCG_1984214I3L0E3 225 aa6.72□□□□□ -1.33
TNFSF4-201ENST00000281834 EPHB6O15197 1021 aa6.72□□□□□ -1.33
TNFSF4-201ENST00000281834 ALAS1P13196 640 aa6.72□□□□□ -1.33
TNFSF4-201ENST00000281834 SMARCA1P28370 1054 aa6.72□□□□□ -1.33
TNFSF4-201ENST00000281834 FXR2P51116 673 aaKnown RBP eCLIP6.72□□□□□ -1.33
TNFSF4-201ENST00000281834 RASA3Q14644 834 aa6.72□□□□□ -1.33
TNFSF4-201ENST00000281834 PTPROQ16827 1216 aa6.72□□□□□ -1.33
TNFSF4-201ENST00000281834 CYP26C1Q6V0L0 522 aa6.72□□□□□ -1.33
TNFSF4-201ENST00000281834 UNC13DQ70J99 1090 aa6.72□□□□□ -1.33
TNFSF4-201ENST00000281834 RRAGAQ7L523 313 aa6.72□□□□□ -1.33
TNFSF4-201ENST00000281834 KSR1Q8IVT5 923 aa6.72□□□□□ -1.33
TNFSF4-201ENST00000281834 MYOCDQ8IZQ8 938 aa6.72□□□□□ -1.33
TNFSF4-201ENST00000281834 ZNF713Q8N859 430 aaPredicted RBP6.72□□□□□ -1.33
TNFSF4-201ENST00000281834 DHTKD1Q96HY7 919 aaPredicted RBP6.72□□□□□ -1.33
TNFSF4-201ENST00000281834 AGBL1Q96MI9 1066 aa6.72□□□□□ -1.33
TNFSF4-201ENST00000281834 PANX2Q96RD6 677 aa6.72□□□□□ -1.33
TNFSF4-201ENST00000281834 MAP7D2Q96T17 732 aa6.72□□□□□ -1.33
TNFSF4-201ENST00000281834 C7orf25Q9BPX7 421 aa6.72□□□□□ -1.33
TNFSF4-201ENST00000281834 EPN1Q9Y6I3 576 aaPredicted RBP6.72□□□□□ -1.33
TNFSF4-201ENST00000281834 DUSP10Q9Y6W6 482 aa6.72□□□□□ -1.33
TNFSF4-201ENST00000281834 CLIC2O15247 247 aa6.71□□□□□ -1.33
TNFSF4-201ENST00000281834 PRPF6O94906 941 aaKnown RBP6.71□□□□□ -1.33
TNFSF4-201ENST00000281834 SEC31AO94979 1220 aaKnown RBP6.71□□□□□ -1.33
TNFSF4-201ENST00000281834 RHOXF2BP0C7M4 288 aa6.71□□□□□ -1.33
TNFSF4-201ENST00000281834 NT5C2P49902 561 aa6.71□□□□□ -1.33
TNFSF4-201ENST00000281834 PPP2R3AQ06190 1150 aa6.71□□□□□ -1.33
TNFSF4-201ENST00000281834 DCAF17Q5H9S7 520 aaPredicted RBP6.71□□□□□ -1.33
TNFSF4-201ENST00000281834 CCDC122Q5T0U0 273 aa6.71□□□□□ -1.33
TNFSF4-201ENST00000281834 CATSPER3Q86XQ3 398 aa6.71□□□□□ -1.33
TNFSF4-201ENST00000281834 TSG101Q99816 390 aa6.71□□□□□ -1.33
TNFSF4-201ENST00000281834 RHOXF2Q9BQY4 288 aa6.71□□□□□ -1.33
TNFSF4-201ENST00000281834 CUEDC2Q9H467 287 aa6.71□□□□□ -1.33
TNFSF4-201ENST00000281834 HDAC6Q9UBN7 1215 aa6.71□□□□□ -1.33
TNFSF4-201ENST00000281834 SCN9AQ15858 1988 aa6.71□□□□□ -1.33
TNFSF4-201ENST00000281834 LAMB1P07942 1786 aa6.71□□□□□ -1.33
TNFSF4-201ENST00000281834 ABCB11O95342 1321 aa6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 ZNF831Q5JPB2 1677 aa6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 WNT10BO00744 389 aa6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 HMGB2P26583 209 aaKnown RBP6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 EEF1GP26641 437 aaKnown RBP6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 PBX1P40424 430 aa6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 DNM2P50570 870 aa6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 PPP4R3AQ6IN85 833 aa6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 TATDN1Q6P1N9 297 aa6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 TMTC1Q8IUR5 882 aa6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 RTKN2Q8IZC4 609 aa6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 RDH13Q8NBN7 331 aa6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 UBE2Q2Q8WVN8 375 aa6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 THAP9Q9H5L6 903 aa6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 STK17AQ9UEE5 414 aa6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 DNM3Q9UQ16 869 aa6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 CENPFP49454 3210 aa6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 PLIN4Q96Q06 1357 aa6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 SMCHD1A6NHR9 2005 aa6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 EML1O00423 815 aa6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 MSH4O15457 936 aa6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 AKR1B10O60218 316 aa6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 SRGAP2O75044 1071 aa6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 NDUFA10O95299 355 aa6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 GCNT3O95395 438 aa6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 NOVP48745 357 aa6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 CASP5P51878 434 aa6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 NSMFQ6X4W1 530 aa6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 SFR1Q86XK3 245 aa6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 FAM114A1Q8IWE2 563 aa6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 CCDC65Q8IXS2 484 aa6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 PURBQ96QR8 312 aaKnown RBP6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 CCDC94Q9BW85 323 aaPredicted RBP6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 NDST4Q9H3R1 872 aa6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 GOPCQ9HD26 462 aa6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 CCPG1Q9ULG6 757 aa6.71□□□□□ -1.34
TNFSF4-201ENST00000281834 GCOM1H8Y6P7 765 aaPredicted RBP6.7□□□□□ -1.34
TNFSF4-201ENST00000281834 TBCAO75347 108 aaKnown RBP6.7□□□□□ -1.34
TNFSF4-201ENST00000281834 ENTPD3O75355 529 aa6.7□□□□□ -1.34
TNFSF4-201ENST00000281834 FLOT1O75955 427 aa6.7□□□□□ -1.34
TNFSF4-201ENST00000281834 POLR2MP0CAP2 368 aa6.7□□□□□ -1.34
TNFSF4-201ENST00000281834 MYCLP12524 364 aaPredicted RBP6.7□□□□□ -1.34
TNFSF4-201ENST00000281834 CLK2P49760 499 aaKnown RBP6.7□□□□□ -1.34
TNFSF4-201ENST00000281834 MRPS25P82663 173 aaKnown RBP6.7□□□□□ -1.34
TNFSF4-201ENST00000281834 HDLBPQ00341 1268 aaKnown RBP6.7□□□□□ -1.34
TNFSF4-201ENST00000281834 RASSF7Q02833 373 aa6.7□□□□□ -1.34
TNFSF4-201ENST00000281834 KCNA1Q09470 495 aa6.7□□□□□ -1.34
TNFSF4-201ENST00000281834 PDIA5Q14554 519 aa6.7□□□□□ -1.34
TNFSF4-201ENST00000281834 LRCH2Q5VUJ6 765 aa6.7□□□□□ -1.34
TNFSF4-201ENST00000281834 DLK2Q6UY11 383 aa6.7□□□□□ -1.34
TNFSF4-201ENST00000281834 MTERF4Q7Z6M4 381 aaKnown RBP6.7□□□□□ -1.34
TNFSF4-201ENST00000281834 DNAAF5Q86Y56 855 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms