RNA–Protein interactions for RNA: ENST00000274695.8

CDKAL1-201, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKAL1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-201ENST00000274695 STAT4Q14765 748 aa6.95□□□□□ -1.3
CDKAL1-201ENST00000274695 PCBP1Q15365 356 aaKnown RBP eCLIP6.95□□□□□ -1.3
CDKAL1-201ENST00000274695 SEPT7Q16181 437 aaKnown RBP6.95□□□□□ -1.3
CDKAL1-201ENST00000274695 LONRF1Q17RB8 773 aa6.95□□□□□ -1.3
CDKAL1-201ENST00000274695 LRRFIP1Q32MZ4 808 aaKnown RBP6.95□□□□□ -1.3
CDKAL1-201ENST00000274695 JAKMIP3Q5VZ66 844 aa6.95□□□□□ -1.3
CDKAL1-201ENST00000274695 TTBK2Q6IQ55 1244 aa6.95□□□□□ -1.3
CDKAL1-201ENST00000274695 PDE12Q6L8Q7 609 aaKnown RBP6.95□□□□□ -1.3
CDKAL1-201ENST00000274695 ITIH6Q6UXX5 1313 aa6.95□□□□□ -1.3
CDKAL1-201ENST00000274695 ZBTB46Q86UZ6 589 aa6.95□□□□□ -1.3
CDKAL1-201ENST00000274695 MB21D2Q8IYB1 491 aaPredicted RBP6.95□□□□□ -1.3
CDKAL1-201ENST00000274695 CEP57L1Q8IYX8 460 aa6.95□□□□□ -1.3
CDKAL1-201ENST00000274695 GPR161Q8N6U8 529 aaKnown RBP6.95□□□□□ -1.3
CDKAL1-201ENST00000274695 MRPS27Q92552 414 aaKnown RBP6.95□□□□□ -1.3
CDKAL1-201ENST00000274695 RUBCNQ92622 972 aa6.95□□□□□ -1.3
CDKAL1-201ENST00000274695 KISS1RQ969F8 398 aaPredicted RBP6.95□□□□□ -1.3
CDKAL1-201ENST00000274695 DCBLD2Q96PD2 775 aa6.95□□□□□ -1.3
CDKAL1-201ENST00000274695 LRRC3Q9BY71 257 aa6.95□□□□□ -1.3
CDKAL1-201ENST00000274695 YY1AP1Q9H869 796 aa6.95□□□□□ -1.3
CDKAL1-201ENST00000274695 IP6K2Q9UHH9 426 aa6.95□□□□□ -1.3
CDKAL1-201ENST00000274695 TPX2Q9ULW0 747 aaKnown RBP6.95□□□□□ -1.3
CDKAL1-201ENST00000274695 VWA3AA6NCI4 1184 aa6.95□□□□□ -1.3
CDKAL1-201ENST00000274695 TIMM44O43615 452 aa6.95□□□□□ -1.3
CDKAL1-201ENST00000274695 CAPN2P17655 700 aa6.95□□□□□ -1.3
CDKAL1-201ENST00000274695 PDIA3P30101 505 aaKnown RBP6.95□□□□□ -1.3
CDKAL1-201ENST00000274695 HALP42357 657 aa6.95□□□□□ -1.3
CDKAL1-201ENST00000274695 CYP2U1Q7Z449 544 aa6.95□□□□□ -1.3
CDKAL1-201ENST00000274695 TRIM42Q8IWZ5 723 aa6.95□□□□□ -1.3
CDKAL1-201ENST00000274695 NECAB1Q8N987 351 aa6.95□□□□□ -1.3
CDKAL1-201ENST00000274695 C16orf45Q96MC5 204 aaPredicted RBP6.95□□□□□ -1.3
CDKAL1-201ENST00000274695 USP28Q96RU2 1077 aa6.95□□□□□ -1.3
CDKAL1-201ENST00000274695 TLR7Q9NYK1 1049 aaKnown RBP6.95□□□□□ -1.3
CDKAL1-201ENST00000274695 KANSL3Q9P2N6 904 aa6.95□□□□□ -1.3
CDKAL1-201ENST00000274695 PCDHA7Q9UN72 937 aa6.95□□□□□ -1.3
CDKAL1-201ENST00000274695 MAP3K2Q9Y2U5 619 aa6.95□□□□□ -1.3
CDKAL1-201ENST00000274695 H7C1W4 665 aa6.94□□□□□ -1.3
CDKAL1-201ENST00000274695 GPR39O43194 453 aa6.94□□□□□ -1.3
CDKAL1-201ENST00000274695 GRM5P41594 1212 aa6.94□□□□□ -1.3
CDKAL1-201ENST00000274695 ID4P47928 161 aa6.94□□□□□ -1.3
CDKAL1-201ENST00000274695 DGKGP49619 791 aa6.94□□□□□ -1.3
CDKAL1-201ENST00000274695 PURAQ00577 322 aaKnown RBP6.94□□□□□ -1.3
CDKAL1-201ENST00000274695 ESCO1Q5FWF5 840 aa6.94□□□□□ -1.3
CDKAL1-201ENST00000274695 RESP18Q5W5W9 173 aa6.94□□□□□ -1.3
CDKAL1-201ENST00000274695 ATG9AQ7Z3C6 839 aa6.94□□□□□ -1.3
CDKAL1-201ENST00000274695 ZNF572Q7Z3I7 529 aaPredicted RBP6.94□□□□□ -1.3
CDKAL1-201ENST00000274695 CMTR1Q8N1G2 835 aaKnown RBP6.94□□□□□ -1.3
CDKAL1-201ENST00000274695 TRIML1Q8N9V2 468 aa6.94□□□□□ -1.3
CDKAL1-201ENST00000274695 EXOC4Q96A65 974 aa6.94□□□□□ -1.3
CDKAL1-201ENST00000274695 TRIM5Q9C035 493 aa6.94□□□□□ -1.3
CDKAL1-201ENST00000274695 INTS13Q9NVM9 706 aa6.94□□□□□ -1.3
CDKAL1-201ENST00000274695 DZANK1Q9NVP4 752 aa6.94□□□□□ -1.3
CDKAL1-201ENST00000274695 DDX20Q9UHI6 824 aaKnown RBP6.94□□□□□ -1.3
CDKAL1-201ENST00000274695 SALL4Q9UJQ4 1053 aa6.94□□□□□ -1.3
CDKAL1-201ENST00000274695 RTCBQ9Y3I0 505 aaKnown RBP6.94□□□□□ -1.3
CDKAL1-201ENST00000274695 RFPL3O75679 317 aa6.94□□□□□ -1.3
CDKAL1-201ENST00000274695 GABBR2O75899 941 aa6.94□□□□□ -1.3
CDKAL1-201ENST00000274695 HTR3AP46098 478 aa6.94□□□□□ -1.3
CDKAL1-201ENST00000274695 FOXO4P98177 505 aa6.94□□□□□ -1.3
CDKAL1-201ENST00000274695 FAM209AQ5JX71 171 aa6.94□□□□□ -1.3
CDKAL1-201ENST00000274695 PKN3Q6P5Z2 889 aa6.94□□□□□ -1.3
CDKAL1-201ENST00000274695 SV2BQ7L1I2 683 aa6.94□□□□□ -1.3
CDKAL1-201ENST00000274695 SUGP1Q8IWZ8 645 aaKnown RBP6.94□□□□□ -1.3
CDKAL1-201ENST00000274695 CNTD1Q8N815 330 aa6.94□□□□□ -1.3
CDKAL1-201ENST00000274695 RABGGTAQ92696 567 aa6.94□□□□□ -1.3
CDKAL1-201ENST00000274695 STRBPQ96SI9 672 aaKnown RBP6.94□□□□□ -1.3
CDKAL1-201ENST00000274695 C9orf78Q9NZ63 289 aaPredicted RBP6.94□□□□□ -1.3
CDKAL1-201ENST00000274695 PUF60Q9UHX1 559 aaKnown RBP6.94□□□□□ -1.3
CDKAL1-201ENST00000274695 ZHX1Q9UKY1 873 aaPredicted RBP6.94□□□□□ -1.3
CDKAL1-201ENST00000274695 NHSQ6T4R5 1651 aa6.94□□□□□ -1.3
CDKAL1-201ENST00000274695 MROH7-TTC4A0A0A0MT08 1334 aa6.93□□□□□ -1.3
CDKAL1-201ENST00000274695 STX10O60499 249 aa6.93□□□□□ -1.3
CDKAL1-201ENST00000274695 JAK2O60674 1132 aa6.93□□□□□ -1.3
CDKAL1-201ENST00000274695 RNASEH2AO75792 299 aaKnown RBP6.93□□□□□ -1.3
CDKAL1-201ENST00000274695 TUBBP07437 444 aa6.93□□□□□ -1.3
CDKAL1-201ENST00000274695 AARSP49588 968 aaKnown RBP eCLIP6.93□□□□□ -1.3
CDKAL1-201ENST00000274695 GPSM2P81274 684 aa6.93□□□□□ -1.3
CDKAL1-201ENST00000274695 SLC39A14Q15043 492 aa6.93□□□□□ -1.3
CDKAL1-201ENST00000274695 ZYXQ15942 572 aaKnown RBP6.93□□□□□ -1.3
CDKAL1-201ENST00000274695 DNTTIP2Q5QJE6 756 aaKnown RBP6.93□□□□□ -1.3
CDKAL1-201ENST00000274695 ICE2Q659A1 982 aa6.93□□□□□ -1.3
CDKAL1-201ENST00000274695 Q6ZUG5 572 aa6.93□□□□□ -1.3
CDKAL1-201ENST00000274695 AACSQ86V21 672 aa6.93□□□□□ -1.3
CDKAL1-201ENST00000274695 PASD1Q8IV76 773 aa6.93□□□□□ -1.3
CDKAL1-201ENST00000274695 SP7Q8TDD2 431 aaPredicted RBP6.93□□□□□ -1.3
CDKAL1-201ENST00000274695 FUT8Q9BYC5 575 aa6.93□□□□□ -1.3
CDKAL1-201ENST00000274695 MUC3BQ9H195 1237 aa6.93□□□□□ -1.3
CDKAL1-201ENST00000274695 PTPDC1A2A3K4 754 aa6.93□□□□□ -1.3
CDKAL1-201ENST00000274695 CCDC151A5D8V7 595 aa6.93□□□□□ -1.3
CDKAL1-201ENST00000274695 RASSF10A6NK89 507 aa6.93□□□□□ -1.3
CDKAL1-201ENST00000274695 ARHGAP6O43182 974 aa6.93□□□□□ -1.3
CDKAL1-201ENST00000274695 RPLP1P05386 114 aaKnown RBP6.93□□□□□ -1.3
CDKAL1-201ENST00000274695 HOXB1P14653 301 aaPredicted RBP6.93□□□□□ -1.3
CDKAL1-201ENST00000274695 SLC10A6Q3KNW5 377 aa6.93□□□□□ -1.3
CDKAL1-201ENST00000274695 PLEKHO1Q53GL0 409 aaPredicted RBP6.93□□□□□ -1.3
CDKAL1-201ENST00000274695 KIAA0319Q5VV43 1072 aa6.93□□□□□ -1.3
CDKAL1-201ENST00000274695 NECAB2Q7Z6G3 386 aa6.93□□□□□ -1.3
CDKAL1-201ENST00000274695 FBXO18Q8NFZ0 1043 aa6.93□□□□□ -1.3
CDKAL1-201ENST00000274695 DDX11Q96FC9 970 aa6.93□□□□□ -1.3
CDKAL1-201ENST00000274695 TRMT2BQ96GJ1 504 aaKnown RBP6.93□□□□□ -1.3
CDKAL1-201ENST00000274695 VIPAS39Q9H9C1 493 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms