RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 GAKO14976 1311 aa11.23□□□□□ -0.61
CPNE9-201ENST00000273027 FAM205AQ6ZU69 1335 aa11.23□□□□□ -0.61
CPNE9-201ENST00000273027 KDM3AQ9Y4C1 1321 aa11.23□□□□□ -0.61
CPNE9-201ENST00000273027 TTC26A0AVF1 554 aa11.22□□□□□ -0.61
CPNE9-201ENST00000273027 G3V3G9 751 aa11.22□□□□□ -0.61
CPNE9-201ENST00000273027 GNA14O95837 355 aa11.22□□□□□ -0.61
CPNE9-201ENST00000273027 FLT1P17948 1338 aa11.22□□□□□ -0.61
CPNE9-201ENST00000273027 TRIM21P19474 475 aaKnown RBP11.22□□□□□ -0.61
CPNE9-201ENST00000273027 ARHGAP25P42331 645 aa11.22□□□□□ -0.61
CPNE9-201ENST00000273027 AMPD2Q01433 879 aa11.22□□□□□ -0.61
CPNE9-201ENST00000273027 PDE4DQ08499 809 aa11.22□□□□□ -0.61
CPNE9-201ENST00000273027 MKRN3Q13064 507 aaKnown RBP11.22□□□□□ -0.61
CPNE9-201ENST00000273027 MTF1Q14872 753 aa11.22□□□□□ -0.61
CPNE9-201ENST00000273027 SPA17Q15506 151 aa11.22□□□□□ -0.61
CPNE9-201ENST00000273027 INF2Q27J81 1249 aa11.22□□□□□ -0.61
CPNE9-201ENST00000273027 DCAF8Q5TAQ9 597 aa11.22□□□□□ -0.61
CPNE9-201ENST00000273027 ANGEL2Q5VTE6 544 aaKnown RBP11.22□□□□□ -0.61
CPNE9-201ENST00000273027 PPP4R3AQ6IN85 833 aa11.22□□□□□ -0.61
CPNE9-201ENST00000273027 CENPPQ6IPU0 288 aa11.22□□□□□ -0.61
CPNE9-201ENST00000273027 TRAPPC11Q7Z392 1133 aa11.22□□□□□ -0.61
CPNE9-201ENST00000273027 REXO1Q8N1G1 1221 aaKnown RBP11.22□□□□□ -0.61
CPNE9-201ENST00000273027 STAG2Q8N3U4 1231 aa11.22□□□□□ -0.61
CPNE9-201ENST00000273027 TRIM58Q8NG06 486 aa11.22□□□□□ -0.61
CPNE9-201ENST00000273027 SH3RF3Q8TEJ3 882 aaPredicted RBP11.22□□□□□ -0.61
CPNE9-201ENST00000273027 TGFBRAP1Q8WUH2 860 aa11.22□□□□□ -0.61
CPNE9-201ENST00000273027 TSG101Q99816 390 aa11.22□□□□□ -0.61
CPNE9-201ENST00000273027 TTYH3Q9C0H2 523 aa11.22□□□□□ -0.61
CPNE9-201ENST00000273027 NT5C3AQ9H0P0 336 aa11.22□□□□□ -0.61
CPNE9-201ENST00000273027 CD209Q9NNX6 404 aa11.22□□□□□ -0.61
CPNE9-201ENST00000273027 RNF14Q9UBS8 474 aa11.22□□□□□ -0.61
CPNE9-201ENST00000273027 POLLQ9UGP5 575 aa11.22□□□□□ -0.61
CPNE9-201ENST00000273027 GGA1Q9UJY5 639 aa11.22□□□□□ -0.61
CPNE9-201ENST00000273027 L1RE1Q9UN81 338 aa11.22□□□□□ -0.61
CPNE9-201ENST00000273027 PLAGL2Q9UPG8 496 aa11.22□□□□□ -0.61
CPNE9-201ENST00000273027 SAR1BQ9Y6B6 198 aa11.22□□□□□ -0.61
CPNE9-201ENST00000273027 ATAD5Q96QE3 1844 aa11.21□□□□□ -0.61
CPNE9-201ENST00000273027 CYTH3O43739 400 aa11.21□□□□□ -0.61
CPNE9-201ENST00000273027 CCNT1O60563 726 aaKnown RBP11.21□□□□□ -0.61
CPNE9-201ENST00000273027 FKTNO75072 461 aa11.21□□□□□ -0.61
CPNE9-201ENST00000273027 CYP2D6P10635 497 aa11.21□□□□□ -0.61
CPNE9-201ENST00000273027 PLCG1P19174 1290 aa11.21□□□□□ -0.61
CPNE9-201ENST00000273027 MTIF2P46199 727 aaKnown RBP11.21□□□□□ -0.61
CPNE9-201ENST00000273027 FKBP1BP68106 108 aa11.21□□□□□ -0.61
CPNE9-201ENST00000273027 ASIC1P78348 528 aa11.21□□□□□ -0.61
CPNE9-201ENST00000273027 GPSM2P81274 684 aa11.21□□□□□ -0.61
CPNE9-201ENST00000273027 KIF5AQ12840 1032 aa11.21□□□□□ -0.61
CPNE9-201ENST00000273027 TTLL12Q14166 644 aaPredicted RBP11.21□□□□□ -0.61
CPNE9-201ENST00000273027 MAN2A1Q16706 1144 aa11.21□□□□□ -0.61
CPNE9-201ENST00000273027 HSP90B2PQ58FF3 399 aa11.21□□□□□ -0.61
CPNE9-201ENST00000273027 BEND6Q5SZJ8 279 aaPredicted RBP11.21□□□□□ -0.61
CPNE9-201ENST00000273027 GPATCH4Q5T3I0 446 aaKnown RBP11.21□□□□□ -0.61
CPNE9-201ENST00000273027 PRAMEF18Q5VWM3 479 aa11.21□□□□□ -0.61
CPNE9-201ENST00000273027 ZNF572Q7Z3I7 529 aaPredicted RBP11.21□□□□□ -0.61
CPNE9-201ENST00000273027 KIAA1328Q86T90 577 aa11.21□□□□□ -0.61
CPNE9-201ENST00000273027 TEX11Q8IYF3 940 aa11.21□□□□□ -0.61
CPNE9-201ENST00000273027 SMYD4Q8IYR2 804 aaPredicted RBP11.21□□□□□ -0.61
CPNE9-201ENST00000273027 LRRN4CLQ8ND94 238 aa11.21□□□□□ -0.61
CPNE9-201ENST00000273027 SYN2Q92777 582 aaPredicted RBP11.21□□□□□ -0.61
CPNE9-201ENST00000273027 CDK5RAP3Q96JB5 506 aa11.21□□□□□ -0.61
CPNE9-201ENST00000273027 PURBQ96QR8 312 aaKnown RBP11.21□□□□□ -0.61
CPNE9-201ENST00000273027 BMP2KQ9NSY1 1161 aaPredicted RBP11.21□□□□□ -0.61
CPNE9-201ENST00000273027 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.21□□□□□ -0.61
CPNE9-201ENST00000273027 STX8Q9UNK0 236 aa11.21□□□□□ -0.61
CPNE9-201ENST00000273027 SCAF8Q9UPN6 1271 aaKnown RBP11.21□□□□□ -0.61
CPNE9-201ENST00000273027 GDAQ9Y2T3 454 aa11.21□□□□□ -0.61
CPNE9-201ENST00000273027 KIAA0100Q14667 2235 aaKnown RBP11.2□□□□□ -0.62
CPNE9-201ENST00000273027 ATP8B3O60423 1300 aa11.2□□□□□ -0.62
CPNE9-201ENST00000273027 SSU72P8A0A1W2PR75 194 aa11.2□□□□□ -0.62
CPNE9-201ENST00000273027 A6NNZ2 444 aa11.2□□□□□ -0.62
CPNE9-201ENST00000273027 TACC1O75410 805 aa11.2□□□□□ -0.62
CPNE9-201ENST00000273027 LCA5LO95447 670 aa11.2□□□□□ -0.62
CPNE9-201ENST00000273027 VIL1P09327 827 aaKnown RBP11.2□□□□□ -0.62
CPNE9-201ENST00000273027 SNHG28P0DPA3 235 aa11.2□□□□□ -0.62
CPNE9-201ENST00000273027 CASP1P29466 404 aa11.2□□□□□ -0.62
CPNE9-201ENST00000273027 BTDP43251 543 aa11.2□□□□□ -0.62
CPNE9-201ENST00000273027 TM4SF4P48230 202 aa11.2□□□□□ -0.62
CPNE9-201ENST00000273027 VAV2P52735 878 aa11.2□□□□□ -0.62
CPNE9-201ENST00000273027 TUBB8Q3ZCM7 444 aa11.2□□□□□ -0.62
CPNE9-201ENST00000273027 NOM1Q5C9Z4 860 aaKnown RBP11.2□□□□□ -0.62
CPNE9-201ENST00000273027 MUM1L1Q5H9M0 696 aa11.2□□□□□ -0.62
CPNE9-201ENST00000273027 HYIQ5T013 277 aa11.2□□□□□ -0.62
CPNE9-201ENST00000273027 CCDC122Q5T0U0 273 aa11.2□□□□□ -0.62
CPNE9-201ENST00000273027 KRT79Q5XKE5 535 aa11.2□□□□□ -0.62
CPNE9-201ENST00000273027 MOXD1Q6UVY6 613 aa11.2□□□□□ -0.62
CPNE9-201ENST00000273027 PPP4R3CPQ6ZMV5 832 aa11.2□□□□□ -0.62
CPNE9-201ENST00000273027 GOLGA6L1Q8N7Z2 621 aa11.2□□□□□ -0.62
CPNE9-201ENST00000273027 FAM71BQ8TC56 605 aa11.2□□□□□ -0.62
CPNE9-201ENST00000273027 LARP4BQ92615 738 aaKnown RBP11.2□□□□□ -0.62
CPNE9-201ENST00000273027 STAMQ92783 540 aa11.2□□□□□ -0.62
CPNE9-201ENST00000273027 GPKOWQ92917 476 aaPredicted RBP eCLIP11.2□□□□□ -0.62
CPNE9-201ENST00000273027 JAKMIP2Q96AA8 810 aa11.2□□□□□ -0.62
CPNE9-201ENST00000273027 CNOT6LQ96LI5 555 aaKnown RBP11.2□□□□□ -0.62
CPNE9-201ENST00000273027 CCDC17Q96LX7 622 aa11.2□□□□□ -0.62
CPNE9-201ENST00000273027 MTMR9Q96QG7 549 aa11.2□□□□□ -0.62
CPNE9-201ENST00000273027 DUSP9Q99956 384 aaKnown RBP11.2□□□□□ -0.62
CPNE9-201ENST00000273027 NOC4LQ9BVI4 516 aaKnown RBP11.2□□□□□ -0.62
CPNE9-201ENST00000273027 ZC3H12CQ9C0D7 883 aaKnown RBP11.2□□□□□ -0.62
CPNE9-201ENST00000273027 TMEM60Q9H2L4 133 aa11.2□□□□□ -0.62
CPNE9-201ENST00000273027 R3HDMLQ9H3Y0 253 aa11.2□□□□□ -0.62
CPNE9-201ENST00000273027 ANKZF1Q9H8Y5 726 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms