RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 GOLGA8FQ08AF8 430 aa9.77□□□□□ -0.84
TRIM43-201ENST00000272395 GOLGA8DPQ0D2H9 430 aa9.77□□□□□ -0.84
TRIM43-201ENST00000272395 TAF1CQ15572 869 aaPredicted RBP9.77□□□□□ -0.84
TRIM43-201ENST00000272395 HSP90AA4PQ58FG1 418 aa9.77□□□□□ -0.84
TRIM43-201ENST00000272395 TMCO3Q6UWJ1 677 aa9.77□□□□□ -0.84
TRIM43-201ENST00000272395 TOGARAM2Q6ZUX3 1019 aa9.77□□□□□ -0.84
TRIM43-201ENST00000272395 TMTC1Q8IUR5 882 aa9.77□□□□□ -0.84
TRIM43-201ENST00000272395 REM2Q8IYK8 340 aaPredicted RBP9.77□□□□□ -0.84
TRIM43-201ENST00000272395 BLIDQ8IZY5 108 aa9.77□□□□□ -0.84
TRIM43-201ENST00000272395 GMCL1P1Q8NEA9 526 aa9.77□□□□□ -0.84
TRIM43-201ENST00000272395 CCDC148Q8NFR7 591 aa9.77□□□□□ -0.84
TRIM43-201ENST00000272395 LPAR1Q92633 364 aa9.77□□□□□ -0.84
TRIM43-201ENST00000272395 RABGGTAQ92696 567 aa9.77□□□□□ -0.84
TRIM43-201ENST00000272395 KIFC2Q96AC6 838 aa9.77□□□□□ -0.84
TRIM43-201ENST00000272395 CARD6Q9BX69 1037 aa9.77□□□□□ -0.84
TRIM43-201ENST00000272395 FBXO28Q9NVF7 368 aa9.77□□□□□ -0.84
TRIM43-201ENST00000272395 ZNF446Q9NWS9 450 aa9.77□□□□□ -0.84
TRIM43-201ENST00000272395 PCDHA4Q9UN74 947 aa9.77□□□□□ -0.84
TRIM43-201ENST00000272395 ADGRG1Q9Y653 693 aa9.77□□□□□ -0.84
TRIM43-201ENST00000272395 FRMPD2Q68DX3 1309 aaPredicted RBP9.77□□□□□ -0.85
TRIM43-201ENST00000272395 hCG_1642624A0A1W2PR95 340 aa9.77□□□□□ -0.85
TRIM43-201ENST00000272395 USP17L15C9J2P7 530 aa9.77□□□□□ -0.85
TRIM43-201ENST00000272395 USP17L13C9JLJ4 530 aa9.77□□□□□ -0.85
TRIM43-201ENST00000272395 USP17L11C9JVI0 530 aa9.77□□□□□ -0.85
TRIM43-201ENST00000272395 USP17L18D6R9N7 530 aa9.77□□□□□ -0.85
TRIM43-201ENST00000272395 USP17L22D6RA61 530 aa9.77□□□□□ -0.85
TRIM43-201ENST00000272395 USP17L17D6RBQ6 530 aa9.77□□□□□ -0.85
TRIM43-201ENST00000272395 USP17L19D6RCP7 530 aa9.77□□□□□ -0.85
TRIM43-201ENST00000272395 USP17L20D6RJB6 530 aa9.77□□□□□ -0.85
TRIM43-201ENST00000272395 WDR46O15213 610 aaKnown RBP9.77□□□□□ -0.85
TRIM43-201ENST00000272395 KIF5CO60282 957 aa9.77□□□□□ -0.85
TRIM43-201ENST00000272395 ECM2O94769 699 aaPredicted RBP9.77□□□□□ -0.85
TRIM43-201ENST00000272395 ZRANB2O95218 330 aaKnown RBP eCLIP9.77□□□□□ -0.85
TRIM43-201ENST00000272395 GOLGA8HP0CJ92 632 aa9.77□□□□□ -0.85
TRIM43-201ENST00000272395 HSPA1AP0DMV8 641 aaKnown RBP9.77□□□□□ -0.85
TRIM43-201ENST00000272395 HSPA1BP0DMV9 641 aaKnown RBP9.77□□□□□ -0.85
TRIM43-201ENST00000272395 IRX3P78415 501 aaPredicted RBP9.77□□□□□ -0.85
TRIM43-201ENST00000272395 RBL2Q08999 1139 aa9.77□□□□□ -0.85
TRIM43-201ENST00000272395 USP17L24Q0WX57 530 aa9.77□□□□□ -0.85
TRIM43-201ENST00000272395 PAK1Q13153 545 aa9.77□□□□□ -0.85
TRIM43-201ENST00000272395 KCNB1Q14721 858 aa9.77□□□□□ -0.85
TRIM43-201ENST00000272395 GRM4Q14833 912 aa9.77□□□□□ -0.85
TRIM43-201ENST00000272395 CCDC96Q2M329 555 aa9.77□□□□□ -0.85
TRIM43-201ENST00000272395 KLHL10Q6JEL2 608 aa9.77□□□□□ -0.85
TRIM43-201ENST00000272395 POTEEQ6S8J3 1075 aa9.77□□□□□ -0.85
TRIM43-201ENST00000272395 CATSPERGQ6ZRH7 1159 aa9.77□□□□□ -0.85
TRIM43-201ENST00000272395 PIK3AP1Q6ZUJ8 805 aa9.77□□□□□ -0.85
TRIM43-201ENST00000272395 KCTD1Q719H9 257 aa9.77□□□□□ -0.85
TRIM43-201ENST00000272395 RSRC2Q7L4I2 434 aaKnown RBP9.77□□□□□ -0.85
TRIM43-201ENST00000272395 C4orf32Q8N8J7 132 aa9.77□□□□□ -0.85
TRIM43-201ENST00000272395 PNMA1Q8ND90 353 aa9.77□□□□□ -0.85
TRIM43-201ENST00000272395 WDR24Q96S15 920 aa9.77□□□□□ -0.85
TRIM43-201ENST00000272395 P2RX7Q99572 595 aaKnown RBP9.77□□□□□ -0.85
TRIM43-201ENST00000272395 CUEDC2Q9H467 287 aa9.77□□□□□ -0.85
TRIM43-201ENST00000272395 MAGEF1Q9HAY2 307 aa9.77□□□□□ -0.85
TRIM43-201ENST00000272395 MYO1AQ9UBC5 1043 aa9.77□□□□□ -0.85
TRIM43-201ENST00000272395 CPA4Q9UI42 421 aa9.77□□□□□ -0.85
TRIM43-201ENST00000272395 WNT7AO00755 349 aa9.76□□□□□ -0.85
TRIM43-201ENST00000272395 FANCGO15287 622 aa9.76□□□□□ -0.85
TRIM43-201ENST00000272395 TEX33O43247 280 aa9.76□□□□□ -0.85
TRIM43-201ENST00000272395 RPN1P04843 607 aaKnown RBP9.76□□□□□ -0.85
TRIM43-201ENST00000272395 PDHBP11177 359 aa9.76□□□□□ -0.85
TRIM43-201ENST00000272395 OSBPP22059 807 aa9.76□□□□□ -0.85
TRIM43-201ENST00000272395 HOXA7P31268 230 aaPredicted RBP9.76□□□□□ -0.85
TRIM43-201ENST00000272395 MCM7P33993 719 aa9.76□□□□□ -0.85
TRIM43-201ENST00000272395 SLC16A2P36021 539 aa9.76□□□□□ -0.85
TRIM43-201ENST00000272395 PRPHP41219 470 aa9.76□□□□□ -0.85
TRIM43-201ENST00000272395 SLC1A4P43007 532 aa9.76□□□□□ -0.85
TRIM43-201ENST00000272395 PPP2R3AQ06190 1150 aa9.76□□□□□ -0.85
TRIM43-201ENST00000272395 KRT31Q15323 416 aa9.76□□□□□ -0.85
TRIM43-201ENST00000272395 RRAGBQ5VZM2 374 aa9.76□□□□□ -0.85
TRIM43-201ENST00000272395 TTBK2Q6IQ55 1244 aa9.76□□□□□ -0.85
TRIM43-201ENST00000272395 LRRN4CLQ8ND94 238 aa9.76□□□□□ -0.85
TRIM43-201ENST00000272395 GMCL1Q96IK5 515 aa9.76□□□□□ -0.85
TRIM43-201ENST00000272395 PARK7Q99497 189 aaKnown RBP9.76□□□□□ -0.85
TRIM43-201ENST00000272395 BEGAINQ9BUH8 593 aa9.76□□□□□ -0.85
TRIM43-201ENST00000272395 GPCPD1Q9NPB8 672 aa9.76□□□□□ -0.85
TRIM43-201ENST00000272395 SYNPO2Q9UMS6 1093 aa9.76□□□□□ -0.85
TRIM43-201ENST00000272395 CTNND2Q9UQB3 1225 aa9.76□□□□□ -0.85
TRIM43-201ENST00000272395 SLC45A1Q9Y2W3 748 aa9.76□□□□□ -0.85
TRIM43-201ENST00000272395 FHOD1Q9Y613 1164 aa9.76□□□□□ -0.85
TRIM43-201ENST00000272395 LOC285556D6RIA3 1793 aa9.75□□□□□ -0.85
TRIM43-201ENST00000272395 CCDC194A0A1B0GVG4 234 aa9.75□□□□□ -0.85
TRIM43-201ENST00000272395 POTEB2H3BUK9 544 aa9.75□□□□□ -0.85
TRIM43-201ENST00000272395 M0R2N6 131 aa9.75□□□□□ -0.85
TRIM43-201ENST00000272395 N4BP3O15049 544 aa9.75□□□□□ -0.85
TRIM43-201ENST00000272395 CA12O43570 354 aa9.75□□□□□ -0.85
TRIM43-201ENST00000272395 FLOT1O75955 427 aa9.75□□□□□ -0.85
TRIM43-201ENST00000272395 ALDH1A1P00352 501 aa9.75□□□□□ -0.85
TRIM43-201ENST00000272395 PNMA6AP0CW24 399 aaPredicted RBP9.75□□□□□ -0.85
TRIM43-201ENST00000272395 BMP3P12645 472 aa9.75□□□□□ -0.85
TRIM43-201ENST00000272395 PPP1R2P41236 205 aa9.75□□□□□ -0.85
TRIM43-201ENST00000272395 STAT6P42226 847 aa9.75□□□□□ -0.85
TRIM43-201ENST00000272395 STX17P56962 302 aa9.75□□□□□ -0.85
TRIM43-201ENST00000272395 SNAP25P60880 206 aa9.75□□□□□ -0.85
TRIM43-201ENST00000272395 HERVK_113P62684 666 aa9.75□□□□□ -0.85
TRIM43-201ENST00000272395 PABPC4Q13310 644 aaKnown RBP eCLIP9.75□□□□□ -0.85
TRIM43-201ENST00000272395 ORC2Q13416 577 aaPredicted RBP9.75□□□□□ -0.85
TRIM43-201ENST00000272395 STIM1Q13586 685 aa9.75□□□□□ -0.85
TRIM43-201ENST00000272395 TERF2Q15554 542 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms