RNA–Protein interactions for RNA: ENST00000270349.11

SLC6A3-201, Transcript of solute carrier family 6 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A3, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A3-201ENST00000270349 TEX33O43247 280 aa13.12□□□□□ -0.31
SLC6A3-201ENST00000270349 RHOBTB3O94955 611 aa13.12□□□□□ -0.31
SLC6A3-201ENST00000270349 STK4Q13043 487 aa13.12□□□□□ -0.31
SLC6A3-201ENST00000270349 UNC13DQ70J99 1090 aa13.12□□□□□ -0.31
SLC6A3-201ENST00000270349 ADSSL1Q8N142 457 aa13.12□□□□□ -0.31
SLC6A3-201ENST00000270349 CYP2W1Q8TAV3 490 aa13.12□□□□□ -0.31
SLC6A3-201ENST00000270349 NOC3LQ8WTT2 800 aaKnown RBP13.12□□□□□ -0.31
SLC6A3-201ENST00000270349 UPF1Q92900 1129 aaKnown RBP eCLIP13.12□□□□□ -0.31
SLC6A3-201ENST00000270349 FHDC1Q9C0D6 1143 aaPredicted RBP13.12□□□□□ -0.31
SLC6A3-201ENST00000270349 CSADQ9Y600 493 aa13.12□□□□□ -0.31
SLC6A3-201ENST00000270349 TRAF5O00463 557 aa13.12□□□□□ -0.31
SLC6A3-201ENST00000270349 EIF2AK2P19525 551 aaKnown RBP13.12□□□□□ -0.31
SLC6A3-201ENST00000270349 NF2P35240 595 aa13.12□□□□□ -0.31
SLC6A3-201ENST00000270349 ARMCX5Q6P1M9 558 aa13.12□□□□□ -0.31
SLC6A3-201ENST00000270349 PNMA5Q96PV4 448 aa13.12□□□□□ -0.31
SLC6A3-201ENST00000270349 MMTAG2Q9BU76 263 aaKnown RBP13.12□□□□□ -0.31
SLC6A3-201ENST00000270349 DDNO94850 711 aaPredicted RBP13.11□□□□□ -0.31
SLC6A3-201ENST00000270349 TRIM21P19474 475 aaKnown RBP13.11□□□□□ -0.31
SLC6A3-201ENST00000270349 CCNE1P24864 410 aa13.11□□□□□ -0.31
SLC6A3-201ENST00000270349 ZNF280CQ8ND82 737 aa13.11□□□□□ -0.31
SLC6A3-201ENST00000270349 NOC4LQ9BVI4 516 aaKnown RBP13.11□□□□□ -0.31
SLC6A3-201ENST00000270349 ZSCAN12O43309 604 aa13.11□□□□□ -0.31
SLC6A3-201ENST00000270349 PPP1R12BO60237 982 aaPredicted RBP13.11□□□□□ -0.31
SLC6A3-201ENST00000270349 IPO7O95373 1038 aaKnown RBP13.11□□□□□ -0.31
SLC6A3-201ENST00000270349 MYOCDQ8IZQ8 938 aa13.11□□□□□ -0.31
SLC6A3-201ENST00000270349 STK24Q9Y6E0 443 aa13.11□□□□□ -0.31
SLC6A3-201ENST00000270349 FOCADQ5VW36 1801 aa13.11□□□□□ -0.31
SLC6A3-201ENST00000270349 FAM86B1E9PN63 330 aa13.11□□□□□ -0.31
SLC6A3-201ENST00000270349 FZD9O00144 591 aa13.11□□□□□ -0.31
SLC6A3-201ENST00000270349 FAM13AO94988 1023 aa13.11□□□□□ -0.31
SLC6A3-201ENST00000270349 FAM86B2P0C5J1 330 aa13.11□□□□□ -0.31
SLC6A3-201ENST00000270349 TBC1D8BQ0IIM8 1120 aa13.11□□□□□ -0.31
SLC6A3-201ENST00000270349 CTTNQ14247 550 aaKnown RBP13.11□□□□□ -0.31
SLC6A3-201ENST00000270349 TCP11X2Q5H9J9 407 aa13.11□□□□□ -0.31
SLC6A3-201ENST00000270349 CEP135Q66GS9 1140 aa13.11□□□□□ -0.31
SLC6A3-201ENST00000270349 DPY19L2Q6NUT2 758 aa13.11□□□□□ -0.31
SLC6A3-201ENST00000270349 SCYL3Q8IZE3 742 aa13.11□□□□□ -0.31
SLC6A3-201ENST00000270349 GIMAP8Q8ND71 665 aaPredicted RBP13.11□□□□□ -0.31
SLC6A3-201ENST00000270349 ZNHIT6Q9NWK9 470 aaKnown RBP13.11□□□□□ -0.31
SLC6A3-201ENST00000270349 GPRC5DQ9NZD1 345 aa13.11□□□□□ -0.31
SLC6A3-201ENST00000270349 TESPA1A2RU30 521 aaPredicted RBP13.1□□□□□ -0.31
SLC6A3-201ENST00000270349 MSH4O15457 936 aa13.1□□□□□ -0.31
SLC6A3-201ENST00000270349 VCAM1P19320 739 aa13.1□□□□□ -0.31
SLC6A3-201ENST00000270349 SP4Q02446 784 aa13.1□□□□□ -0.31
SLC6A3-201ENST00000270349 EAPPQ56P03 285 aaPredicted RBP13.1□□□□□ -0.31
SLC6A3-201ENST00000270349 WDR78Q5VTH9 848 aa13.1□□□□□ -0.31
SLC6A3-201ENST00000270349 ARHGEF16Q5VV41 709 aa13.1□□□□□ -0.31
SLC6A3-201ENST00000270349 TEKT3Q9BXF9 490 aa13.1□□□□□ -0.31
SLC6A3-201ENST00000270349 RANBP17Q9H2T7 1088 aaKnown RBP13.1□□□□□ -0.31
SLC6A3-201ENST00000270349 RABGAP1Q9Y3P9 1069 aa13.1□□□□□ -0.31
SLC6A3-201ENST00000270349 COL2A1P02458 1487 aaPredicted RBP13.1□□□□□ -0.31
SLC6A3-201ENST00000270349 ZNF18P17022 549 aa13.1□□□□□ -0.31
SLC6A3-201ENST00000270349 CEP55Q53EZ4 464 aa13.1□□□□□ -0.31
SLC6A3-201ENST00000270349 SLC30A10Q6XR72 485 aa13.1□□□□□ -0.31
SLC6A3-201ENST00000270349 KIAA1683Q9H0B3 1180 aa13.1□□□□□ -0.31
SLC6A3-201ENST00000270349 ICAM1P05362 532 aa13.1□□□□□ -0.31
SLC6A3-201ENST00000270349 MOXD1Q6UVY6 613 aa13.1□□□□□ -0.31
SLC6A3-201ENST00000270349 KCNK18Q7Z418 384 aa13.1□□□□□ -0.31
SLC6A3-201ENST00000270349 GPC2Q8N158 579 aa13.1□□□□□ -0.31
SLC6A3-201ENST00000270349 CNOT6LQ96LI5 555 aaKnown RBP13.1□□□□□ -0.31
SLC6A3-201ENST00000270349 BHMT2Q9H2M3 363 aa13.1□□□□□ -0.31
SLC6A3-201ENST00000270349 POLD4Q9HCU8 107 aa13.1□□□□□ -0.31
SLC6A3-201ENST00000270349 BLOC1S4Q9NUP1 217 aa13.1□□□□□ -0.31
SLC6A3-201ENST00000270349 RGL1Q9NZL6 768 aa13.1□□□□□ -0.31
SLC6A3-201ENST00000270349 CLEC11AQ9Y240 323 aa13.1□□□□□ -0.31
SLC6A3-201ENST00000270349 COL4A5P29400 1685 aa13.1□□□□□ -0.31
SLC6A3-201ENST00000270349 PVALEFA0A1B0GWK0 134 aa13.09□□□□□ -0.31
SLC6A3-201ENST00000270349 TBX3O15119 743 aa13.09□□□□□ -0.31
SLC6A3-201ENST00000270349 GPR162Q16538 588 aa13.09□□□□□ -0.31
SLC6A3-201ENST00000270349 ZNF771Q7L3S4 317 aaPredicted RBP13.09□□□□□ -0.31
SLC6A3-201ENST00000270349 KRT26Q7Z3Y9 468 aa13.09□□□□□ -0.31
SLC6A3-201ENST00000270349 CNGA4Q8IV77 575 aa13.09□□□□□ -0.31
SLC6A3-201ENST00000270349 PIGOQ8TEQ8 1089 aa13.09□□□□□ -0.31
SLC6A3-201ENST00000270349 ATG4CQ96DT6 458 aa13.09□□□□□ -0.31
SLC6A3-201ENST00000270349 TRERF1Q96PN7 1200 aa13.09□□□□□ -0.31
SLC6A3-201ENST00000270349 HSD3B7Q9H2F3 369 aa13.09□□□□□ -0.31
SLC6A3-201ENST00000270349 TMX1Q9H3N1 280 aa13.09□□□□□ -0.31
SLC6A3-201ENST00000270349 NPHP3-ACAD11A0A0J9YXS1 232 aa13.09□□□□□ -0.31
SLC6A3-201ENST00000270349 NFIBO00712 420 aa13.09□□□□□ -0.31
SLC6A3-201ENST00000270349 RNF207Q6ZRF8 634 aa13.09□□□□□ -0.31
SLC6A3-201ENST00000270349 MIER3Q7Z3K6 550 aa13.09□□□□□ -0.31
SLC6A3-201ENST00000270349 MED24O75448 989 aa13.09□□□□□ -0.31
SLC6A3-201ENST00000270349 CCZ1BP86790 482 aa13.09□□□□□ -0.31
SLC6A3-201ENST00000270349 CCZ1P86791 482 aaPredicted RBP13.09□□□□□ -0.31
SLC6A3-201ENST00000270349 COASYQ13057 564 aa13.09□□□□□ -0.31
SLC6A3-201ENST00000270349 SNRNP48Q6IEG0 339 aaKnown RBP13.09□□□□□ -0.31
SLC6A3-201ENST00000270349 MAEAQ7L5Y9 396 aa13.09□□□□□ -0.31
SLC6A3-201ENST00000270349 KIF18AQ8NI77 898 aa13.09□□□□□ -0.31
SLC6A3-201ENST00000270349 TUBGCP2Q9BSJ2 902 aa13.09□□□□□ -0.31
SLC6A3-201ENST00000270349 LTBP3Q9NS15 1303 aa13.09□□□□□ -0.31
SLC6A3-201ENST00000270349 RNF146Q9NTX7 359 aa13.09□□□□□ -0.31
SLC6A3-201ENST00000270349 A0A1B0GTH6 734 aa13.08□□□□□ -0.31
SLC6A3-201ENST00000270349 DYNC1I1O14576 645 aa13.08□□□□□ -0.31
SLC6A3-201ENST00000270349 EEF1GP26641 437 aaKnown RBP13.08□□□□□ -0.31
SLC6A3-201ENST00000270349 BACE1P56817 501 aa13.08□□□□□ -0.31
SLC6A3-201ENST00000270349 GADL1Q6ZQY3 521 aa13.08□□□□□ -0.31
SLC6A3-201ENST00000270349 ZBED3Q96IU2 234 aaPredicted RBP13.08□□□□□ -0.31
SLC6A3-201ENST00000270349 EIF2AK1Q9BQI3 630 aaKnown RBP13.08□□□□□ -0.31
SLC6A3-201ENST00000270349 WDR11Q9BZH6 1224 aa13.08□□□□□ -0.31
SLC6A3-201ENST00000270349 GINM1Q9NU53 330 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms