RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 LDHBP07195 334 aaKnown RBP30.34■■■□□ 2.45
CBX4-201ENST00000269397 KLRC1P26715 233 aa30.34■■■□□ 2.45
CBX4-201ENST00000269397 SKOR1P84550 965 aa30.34■■■□□ 2.45
CBX4-201ENST00000269397 EHHADHQ08426 723 aa30.34■■■□□ 2.45
CBX4-201ENST00000269397 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP30.34■■■□□ 2.45
CBX4-201ENST00000269397 INPP5BP32019 993 aa30.34■■■□□ 2.45
CBX4-201ENST00000269397 POLR2FP61218 127 aaKnown RBP30.34■■■□□ 2.45
CBX4-201ENST00000269397 SPZ1Q9BXG8 430 aa30.34■■■□□ 2.45
CBX4-201ENST00000269397 PACSIN1Q9BY11 444 aa30.34■■■□□ 2.45
CBX4-201ENST00000269397 DDB1Q16531 1140 aa30.33■■■□□ 2.45
CBX4-201ENST00000269397 PTPROQ16827 1216 aa30.33■■■□□ 2.45
CBX4-201ENST00000269397 IQCKQ8N0W5 287 aa30.33■■■□□ 2.45
CBX4-201ENST00000269397 SNX29Q8TEQ0 813 aa30.33■■■□□ 2.45
CBX4-201ENST00000269397 TBC1D5Q92609 795 aa30.33■■■□□ 2.45
CBX4-201ENST00000269397 GDF3Q9NR23 364 aa30.33■■■□□ 2.45
CBX4-201ENST00000269397 TRAF5O00463 557 aa30.33■■■□□ 2.45
CBX4-201ENST00000269397 KCNQ2O43526 872 aa30.33■■■□□ 2.45
CBX4-201ENST00000269397 NOL4O94818 638 aa30.33■■■□□ 2.45
CBX4-201ENST00000269397 FGFR1OPO95684 399 aaKnown RBP30.33■■■□□ 2.45
CBX4-201ENST00000269397 SLC9C1Q4G0N8 1177 aa30.33■■■□□ 2.45
CBX4-201ENST00000269397 CCDC40Q4G0X9 1142 aa30.33■■■□□ 2.45
CBX4-201ENST00000269397 FAM83BQ5T0W9 1011 aa30.33■■■□□ 2.45
CBX4-201ENST00000269397 MMS22LQ6ZRQ5 1243 aa30.33■■■□□ 2.45
CBX4-201ENST00000269397 COA7Q96BR5 231 aa30.33■■■□□ 2.45
CBX4-201ENST00000269397 MTMR9Q96QG7 549 aa30.33■■■□□ 2.45
CBX4-201ENST00000269397 PVALEFA0A1B0GWK0 134 aa30.32■■■□□ 2.44
CBX4-201ENST00000269397 LRRC63Q05C16 580 aa30.32■■■□□ 2.44
CBX4-201ENST00000269397 CASKIN2Q8WXE0 1202 aa30.32■■■□□ 2.44
CBX4-201ENST00000269397 LSM14BQ9BX40 385 aaKnown RBP30.32■■■□□ 2.44
CBX4-201ENST00000269397 TNFRSF8P28908 595 aa30.32■■■□□ 2.44
CBX4-201ENST00000269397 SFMBT2Q5VUG0 894 aa30.32■■■□□ 2.44
CBX4-201ENST00000269397 PIK3R5Q8WYR1 880 aa30.32■■■□□ 2.44
CBX4-201ENST00000269397 EYA3Q99504 573 aa30.32■■■□□ 2.44
CBX4-201ENST00000269397 FGFBP2Q9BYJ0 223 aa30.32■■■□□ 2.44
CBX4-201ENST00000269397 ECM1Q16610 540 aa30.31■■■□□ 2.44
CBX4-201ENST00000269397 CLEC4GQ6UXB4 293 aa30.31■■■□□ 2.44
CBX4-201ENST00000269397 RNF10Q8N5U6 811 aaKnown RBP30.31■■■□□ 2.44
CBX4-201ENST00000269397 RAD54LQ92698 747 aa30.31■■■□□ 2.44
CBX4-201ENST00000269397 GPR101Q96P66 508 aaPredicted RBP30.31■■■□□ 2.44
CBX4-201ENST00000269397 FRMPD2Q68DX3 1309 aaPredicted RBP30.31■■■□□ 2.44
CBX4-201ENST00000269397 SSU72P8A0A1W2PR75 194 aa30.31■■■□□ 2.44
CBX4-201ENST00000269397 SSBP05455 408 aaKnown RBP eCLIP30.31■■■□□ 2.44
CBX4-201ENST00000269397 DNAAF5Q86Y56 855 aa30.31■■■□□ 2.44
CBX4-201ENST00000269397 KLHL7Q8IXQ5 586 aa30.31■■■□□ 2.44
CBX4-201ENST00000269397 MARCH10Q8NA82 808 aaPredicted RBP30.31■■■□□ 2.44
CBX4-201ENST00000269397 PROCA1Q8NCQ7 364 aaPredicted RBP30.31■■■□□ 2.44
CBX4-201ENST00000269397 LZTS2Q9BRK4 669 aa30.31■■■□□ 2.44
CBX4-201ENST00000269397 GLE1Q53GS7 698 aaKnown RBP30.3■■■□□ 2.44
CBX4-201ENST00000269397 NELFCDQ8IXH7 590 aa30.3■■■□□ 2.44
CBX4-201ENST00000269397 TSG101Q99816 390 aa30.3■■■□□ 2.44
CBX4-201ENST00000269397 STK17AQ9UEE5 414 aa30.3■■■□□ 2.44
CBX4-201ENST00000269397 CCDC88AQ3V6T2 1871 aa30.3■■■□□ 2.44
CBX4-201ENST00000269397 GUCY2CP25092 1073 aa30.3■■■□□ 2.44
CBX4-201ENST00000269397 PAK2Q13177 524 aa30.3■■■□□ 2.44
CBX4-201ENST00000269397 RAPGEF1Q13905 1077 aa30.3■■■□□ 2.44
CBX4-201ENST00000269397 SPTY2D1Q68D10 685 aaPredicted RBP30.3■■■□□ 2.44
CBX4-201ENST00000269397 NLRP3Q96P20 1036 aa30.3■■■□□ 2.44
CBX4-201ENST00000269397 GOLPH3Q9H4A6 298 aa30.3■■■□□ 2.44
CBX4-201ENST00000269397 ADAMTS1Q9UHI8 967 aa30.3■■■□□ 2.44
CBX4-201ENST00000269397 A0A087X0T9 212 aa30.3■■■□□ 2.44
CBX4-201ENST00000269397 USP17L5A8MUK1 530 aa30.3■■■□□ 2.44
CBX4-201ENST00000269397 EDIL3O43854 480 aa30.3■■■□□ 2.44
CBX4-201ENST00000269397 FAM228BP0C875 321 aa30.3■■■□□ 2.44
CBX4-201ENST00000269397 LSP1P33241 339 aa30.29■■■□□ 2.44
CBX4-201ENST00000269397 SEC24CP53992 1094 aa30.29■■■□□ 2.44
CBX4-201ENST00000269397 KIAA0753Q2KHM9 967 aa30.29■■■□□ 2.44
CBX4-201ENST00000269397 CENPHQ9H3R5 247 aa30.29■■■□□ 2.44
CBX4-201ENST00000269397 COL4A3BPQ9Y5P4 624 aa30.29■■■□□ 2.44
CBX4-201ENST00000269397 CDK8P49336 464 aa30.29■■■□□ 2.44
CBX4-201ENST00000269397 CACNB1Q02641 598 aaPredicted RBP30.29■■■□□ 2.44
CBX4-201ENST00000269397 PDE4CQ08493 712 aa30.29■■■□□ 2.44
CBX4-201ENST00000269397 TMEM266Q2M3C6 531 aa30.29■■■□□ 2.44
CBX4-201ENST00000269397 MYOCDQ8IZQ8 938 aa30.29■■■□□ 2.44
CBX4-201ENST00000269397 ANKRD2Q9GZV1 360 aa30.29■■■□□ 2.44
CBX4-201ENST00000269397 CAPN7Q9Y6W3 813 aa30.29■■■□□ 2.44
CBX4-201ENST00000269397 FAM133AQ8N9E0 248 aa30.28■■■□□ 2.44
CBX4-201ENST00000269397 CEP95Q96GE4 821 aa30.28■■■□□ 2.44
CBX4-201ENST00000269397 CEP72Q9P209 647 aa30.28■■■□□ 2.44
CBX4-201ENST00000269397 SERPING1P05155 500 aa30.28■■■□□ 2.44
CBX4-201ENST00000269397 HNRNPH1P31943 449 aaKnown RBP30.28■■■□□ 2.44
CBX4-201ENST00000269397 NAB2Q15742 525 aa30.28■■■□□ 2.44
CBX4-201ENST00000269397 RBAK-RBAKDNI3L0D1 243 aa30.27■■■□□ 2.44
CBX4-201ENST00000269397 RAD51CO43502 376 aa30.27■■■□□ 2.44
CBX4-201ENST00000269397 KRT79Q5XKE5 535 aa30.27■■■□□ 2.44
CBX4-201ENST00000269397 KCNV1Q6PIU1 500 aa30.27■■■□□ 2.44
CBX4-201ENST00000269397 MAATS1Q7Z4T9 603 aa30.27■■■□□ 2.44
CBX4-201ENST00000269397 LINC00116Q8NCU8 138 aa30.27■■■□□ 2.44
CBX4-201ENST00000269397 SRP68Q9UHB9 627 aaKnown RBP30.27■■■□□ 2.44
CBX4-201ENST00000269397 TSKSQ9UJT2 592 aa30.27■■■□□ 2.44
CBX4-201ENST00000269397 ABCB11O95342 1321 aa30.27■■■□□ 2.44
CBX4-201ENST00000269397 NR1D1P20393 614 aa30.27■■■□□ 2.44
CBX4-201ENST00000269397 COASYQ13057 564 aa30.27■■■□□ 2.44
CBX4-201ENST00000269397 ATP6V0A2Q9Y487 856 aa30.27■■■□□ 2.44
CBX4-201ENST00000269397 ROBO3Q96MS0 1386 aa30.27■■■□□ 2.44
CBX4-201ENST00000269397 FXR2P51116 673 aaKnown RBP eCLIP30.26■■■□□ 2.432e-6■■□□□ 12
CBX4-201ENST00000269397 ANKIB1Q9P2G1 1089 aa30.26■■■□□ 2.43
CBX4-201ENST00000269397 BAG3O95817 575 aa30.26■■■□□ 2.43
CBX4-201ENST00000269397 HPDP32754 393 aaPredicted RBP30.26■■■□□ 2.43
CBX4-201ENST00000269397 TNNI2P48788 182 aa30.26■■■□□ 2.43
CBX4-201ENST00000269397 FKBP3Q00688 224 aaKnown RBP30.26■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms