RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 ZNRF3Q9ULT6 936 aa12.67□□□□□ -0.38
CLSTN3-201ENST00000266546 ZBTB7AO95365 584 aa12.67□□□□□ -0.38
CLSTN3-201ENST00000266546 CXCR5P32302 372 aa12.67□□□□□ -0.38
CLSTN3-201ENST00000266546 ICA1Q05084 483 aa12.67□□□□□ -0.38
CLSTN3-201ENST00000266546 ASIC2Q16515 512 aa12.67□□□□□ -0.38
CLSTN3-201ENST00000266546 DCAF15Q66K64 600 aa12.67□□□□□ -0.38
CLSTN3-201ENST00000266546 CABP7Q86V35 215 aa12.67□□□□□ -0.38
CLSTN3-201ENST00000266546 NUCKS1Q9H1E3 243 aaKnown RBP12.67□□□□□ -0.38
CLSTN3-201ENST00000266546 MRPL44Q9H9J2 332 aaKnown RBP12.67□□□□□ -0.38
CLSTN3-201ENST00000266546 CICQ96RK0 1608 aaPredicted RBP12.67□□□□□ -0.38
CLSTN3-201ENST00000266546 ACTN4O43707 911 aaKnown RBP12.67□□□□□ -0.38
CLSTN3-201ENST00000266546 ENTPD3O75355 529 aa12.67□□□□□ -0.38
CLSTN3-201ENST00000266546 RAD17O75943 681 aa12.67□□□□□ -0.38
CLSTN3-201ENST00000266546 SLC8A1P32418 973 aa12.67□□□□□ -0.38
CLSTN3-201ENST00000266546 PDCLQ13371 301 aa12.67□□□□□ -0.38
CLSTN3-201ENST00000266546 GRM4Q14833 912 aa12.67□□□□□ -0.38
CLSTN3-201ENST00000266546 DYMQ7RTS9 669 aa12.67□□□□□ -0.38
CLSTN3-201ENST00000266546 TRMT1LQ7Z2T5 733 aaKnown RBP12.67□□□□□ -0.38
CLSTN3-201ENST00000266546 DAAM2Q86T65 1068 aa12.67□□□□□ -0.38
CLSTN3-201ENST00000266546 TC2NQ8N9U0 490 aa12.67□□□□□ -0.38
CLSTN3-201ENST00000266546 RETREG2Q8NC44 543 aa12.67□□□□□ -0.38
CLSTN3-201ENST00000266546 EPB41L5Q9HCM4 733 aa12.67□□□□□ -0.38
CLSTN3-201ENST00000266546 TUBE1Q9UJT0 475 aa12.67□□□□□ -0.38
CLSTN3-201ENST00000266546 ODF2LQ9ULJ1 636 aa12.67□□□□□ -0.38
CLSTN3-201ENST00000266546 HEXIM1O94992 359 aaKnown RBP12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 GOLGA8HP0CJ92 632 aa12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 CDC27P30260 824 aa12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 TXKP42681 527 aa12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 ADCY7P51828 1080 aa12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 PRKG1Q13976 671 aa12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 ALS2CLQ60I27 953 aa12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 TMEM179Q6ZVK1 233 aa12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 COG1Q8WTW3 980 aa12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 GPKOWQ92917 476 aaPredicted RBP eCLIP12.66□□□□□ -0.384e-9■■■■■ 56.5
CLSTN3-201ENST00000266546 PNMA2Q9UL42 364 aa12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 CCNT1O60563 726 aaKnown RBP12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 USP14P54578 494 aa12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 SARNPP82979 210 aaKnown RBP12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 CALCOCO2Q13137 446 aa12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 CHURC1Q8WUH1 139 aa12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 CAMKK2Q96RR4 588 aa12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 CSRNP1Q96S65 589 aa12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 NAP1L3Q99457 506 aaPredicted RBP12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 KCNK3O14649 394 aa12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 PRR29P0C7W0 189 aa12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 ATP11AP98196 1134 aa12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 SLC7A5Q01650 507 aa12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 ST3GAL1Q11201 340 aa12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 ZNF658Q5TYW1 1059 aaPredicted RBP12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 EMBQ6PCB8 327 aa12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 ADGRA1Q86SQ6 560 aa12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 CCDC170Q8IYT3 715 aa12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 TMEM47Q9BQJ4 181 aa12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 CASP1P29466 404 aa12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 ZBED6P86452 979 aa12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 DCAF17Q5H9S7 520 aaPredicted RBP12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 PEX26Q7Z412 305 aa12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 RPAINQ86UA6 219 aa12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 GSPT2Q8IYD1 628 aaKnown RBP12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 LRRN4CLQ8ND94 238 aa12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 MICAL1Q8TDZ2 1067 aa12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 CNOT6LQ96LI5 555 aaKnown RBP12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 LRWD1Q9UFC0 647 aa12.66□□□□□ -0.38
CLSTN3-201ENST00000266546 CTDNEP1O95476 244 aa12.65□□□□□ -0.38
CLSTN3-201ENST00000266546 SETDB1Q15047 1291 aa12.65□□□□□ -0.38
CLSTN3-201ENST00000266546 TCP11X2Q5H9J9 407 aa12.65□□□□□ -0.38
CLSTN3-201ENST00000266546 SLFN13Q68D06 897 aa12.65□□□□□ -0.38
CLSTN3-201ENST00000266546 CCDC65Q8IXS2 484 aa12.65□□□□□ -0.38
CLSTN3-201ENST00000266546 ERMNQ8TAM6 284 aa12.65□□□□□ -0.38
CLSTN3-201ENST00000266546 VTI1AQ96AJ9 217 aa12.65□□□□□ -0.38
CLSTN3-201ENST00000266546 HPS5Q9UPZ3 1129 aa12.65□□□□□ -0.38
CLSTN3-201ENST00000266546 TCP10L2B9ZVM9 353 aa12.65□□□□□ -0.38
CLSTN3-201ENST00000266546 DPEP1P16444 411 aa12.65□□□□□ -0.38
CLSTN3-201ENST00000266546 LONP1P36776 959 aaKnown RBP12.65□□□□□ -0.38
CLSTN3-201ENST00000266546 STXBP4Q6ZWJ1 553 aa12.65□□□□□ -0.38
CLSTN3-201ENST00000266546 REXO1Q8N1G1 1221 aaKnown RBP12.65□□□□□ -0.38
CLSTN3-201ENST00000266546 ZDHHC15Q96MV8 337 aa12.65□□□□□ -0.38
CLSTN3-201ENST00000266546 KRT12Q99456 494 aa12.65□□□□□ -0.38
CLSTN3-201ENST00000266546 NHEJ1Q9H9Q4 299 aaPredicted RBP12.65□□□□□ -0.38
CLSTN3-201ENST00000266546 HERC5Q9UII4 1024 aaKnown RBP12.65□□□□□ -0.38
CLSTN3-201ENST00000266546 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.65□□□□□ -0.38
CLSTN3-201ENST00000266546 SPDYE3A6NKU9 549 aa12.65□□□□□ -0.38
CLSTN3-201ENST00000266546 TMEM110-MUSTN1A8MSY1 372 aa12.65□□□□□ -0.38
CLSTN3-201ENST00000266546 HGSO14964 777 aaPredicted RBP12.65□□□□□ -0.38
CLSTN3-201ENST00000266546 POTEJP0CG39 1038 aa12.65□□□□□ -0.38
CLSTN3-201ENST00000266546 NR1D1P20393 614 aa12.65□□□□□ -0.38
CLSTN3-201ENST00000266546 MRPS25P82663 173 aaKnown RBP12.65□□□□□ -0.38
CLSTN3-201ENST00000266546 RASSF7Q02833 373 aa12.65□□□□□ -0.38
CLSTN3-201ENST00000266546 E2F5Q15329 346 aa12.65□□□□□ -0.38
CLSTN3-201ENST00000266546 SYCP3Q8IZU3 236 aa12.65□□□□□ -0.38
CLSTN3-201ENST00000266546 ZNF579Q8NAF0 562 aaKnown RBP12.65□□□□□ -0.38
CLSTN3-201ENST00000266546 HNRNPLLQ8WVV9 542 aaKnown RBP12.65□□□□□ -0.38
CLSTN3-201ENST00000266546 NCAPGQ9BPX3 1015 aa12.65□□□□□ -0.38
CLSTN3-201ENST00000266546 SUGCTQ9HAC7 445 aa12.65□□□□□ -0.38
CLSTN3-201ENST00000266546 GAKO14976 1311 aa12.65□□□□□ -0.39
CLSTN3-201ENST00000266546 SMCO2A6NFE2 343 aa12.64□□□□□ -0.39
CLSTN3-201ENST00000266546 CETN3O15182 167 aa12.64□□□□□ -0.39
CLSTN3-201ENST00000266546 GCKP35557 465 aa12.64□□□□□ -0.39
CLSTN3-201ENST00000266546 EHHADHQ08426 723 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms