RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 PSMB7Q99436 277 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 SH3GL2Q99962 352 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 BPIFA3Q9BQP9 254 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 CCDC159P0C7I6 412 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 IRAK1P51617 712 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 COPB1P53618 953 aaKnown RBP6.17□□□□□ -1.42
VCAN-201ENST00000265077 KRT24Q2M2I5 525 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 DBNDD2Q9BQY9 259 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 EPS15L1Q9UBC2 864 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 LRWD1Q9UFC0 647 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 CARD8Q9Y2G2 431 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 DDAH1O94760 285 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 ECEL1O95672 775 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 SLC1A4P43007 532 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 KLC3Q6P597 504 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 ZNF354CQ86Y25 554 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 MAP4K1Q92918 833 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 RILPQ96NA2 401 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 ATXN10Q9UBB4 475 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 C15orf41Q9Y2V0 281 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 HSPA8P11142 646 aaKnown RBP6.17□□□□□ -1.42
VCAN-201ENST00000265077 ZNF280DQ6N043 979 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 PALM2Q8IXS6 379 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 INTS9Q9NV88 658 aaKnown RBP6.17□□□□□ -1.42
VCAN-201ENST00000265077 ARMCX3Q9UH62 379 aaPredicted RBP6.17□□□□□ -1.42
VCAN-201ENST00000265077 LIN7AO14910 233 aaPredicted RBP6.17□□□□□ -1.42
VCAN-201ENST00000265077 MGEA5O60502 916 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 ITGA6P23229 1130 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 KCNJ6P48051 423 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 LONRF3Q496Y0 759 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 POTEEQ6S8J3 1075 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 CABP7Q86V35 215 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 COG1Q8WTW3 980 aa6.17□□□□□ -1.42
VCAN-201ENST00000265077 CDCA7Q9BWT1 371 aaPredicted RBP6.17□□□□□ -1.42
VCAN-201ENST00000265077 KIAA1210Q9ULL0 1709 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 USP27XA6NNY8 438 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 SLC12A2P55011 1212 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 FAM173BQ6P4H8 233 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 PIP4K2CQ8TBX8 421 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 MAST3O60307 1309 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 H0Y3Z8 333 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 CD2BP2O95400 341 aaKnown RBP6.16□□□□□ -1.42
VCAN-201ENST00000265077 DHX9Q08211 1270 aaKnown RBP6.16□□□□□ -1.42
VCAN-201ENST00000265077 TBL3Q12788 808 aaKnown RBP6.16□□□□□ -1.42
VCAN-201ENST00000265077 NUDCD3Q8IVD9 361 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 ZMYND10O75800 440 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 ESRRBO95718 433 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 SNX1Q13596 522 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 TTLL12Q14166 644 aaPredicted RBP6.16□□□□□ -1.42
VCAN-201ENST00000265077 CCDC117Q8IWD4 279 aaPredicted RBP6.16□□□□□ -1.42
VCAN-201ENST00000265077 HNRNPLLQ8WVV9 542 aaKnown RBP6.16□□□□□ -1.42
VCAN-201ENST00000265077 ZC3H12CQ9C0D7 883 aaKnown RBP6.16□□□□□ -1.42
VCAN-201ENST00000265077 SOS2Q07890 1332 aaPredicted RBP6.16□□□□□ -1.42
VCAN-201ENST00000265077 FSBPO95073 299 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 KRT10P13645 584 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 NT5C2P49902 561 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 PLS1Q14651 629 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 CCDC125Q86Z20 511 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 RPS6KA5O75582 802 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 HSPA9P38646 679 aaKnown RBP6.16□□□□□ -1.42
VCAN-201ENST00000265077 TXKP42681 527 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 KRT72Q14CN4 511 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 NUGGCQ68CJ6 796 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 PPP1R2P3Q6NXS1 205 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 ZNF449Q6P9G9 518 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 ZNF654Q8IZM8 581 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 FANCBQ8NB91 859 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 RSAD2Q8WXG1 361 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 ECT2Q9H8V3 914 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 SEMA3EO15041 775 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 PDHBP11177 359 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 PDE6CP51160 858 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 MECOMQ03112 1051 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 NAA35Q5VZE5 725 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 NYAP1Q6ZVC0 841 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 SIX5Q8N196 739 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 PBKQ96KB5 322 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 RAB20Q9NX57 234 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 SEPT10Q9P0V9 454 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 ABCC12Q96J65 1359 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 ASCC3Q8N3C0 2202 aaKnown RBP6.16□□□□□ -1.42
VCAN-201ENST00000265077 ARHGAP42A6NI28 874 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 SH3BP5O60239 455 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 H2AFZP0C0S5 128 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 RCN2Q14257 317 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 RASA3Q14644 834 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 H2AFVQ71UI9 128 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 SCYL3Q8IZE3 742 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 SMCR8Q8TEV9 937 aaPredicted RBP6.16□□□□□ -1.42
VCAN-201ENST00000265077 ZNF473Q8WTR7 871 aaKnown RBP6.16□□□□□ -1.42
VCAN-201ENST00000265077 PRPF31Q8WWY3 499 aaKnown RBP6.16□□□□□ -1.42
VCAN-201ENST00000265077 CCDC87Q9NVE4 849 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 SEC16AO15027 2179 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 ATF2P15336 505 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 KCNA4P22459 653 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 MTTPP55157 894 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 CWF19L1Q69YN2 538 aaKnown RBP6.16□□□□□ -1.42
VCAN-201ENST00000265077 OTUD7BQ6GQQ9 843 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 TMEM110Q86TL2 294 aa6.16□□□□□ -1.42
VCAN-201ENST00000265077 AK8Q96MA6 479 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms