RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 SP8Q8IXZ3 490 aa18.29■□□□□ 0.52
PHRF1-201ENST00000264555 FAM204AQ9H8W3 233 aa18.29■□□□□ 0.52
PHRF1-201ENST00000264555 LGALS16A8MUM7 142 aa18.29■□□□□ 0.52
PHRF1-201ENST00000264555 EIF4A3P38919 411 aaKnown RBP18.29■□□□□ 0.52
PHRF1-201ENST00000264555 KRT71Q3SY84 523 aa18.29■□□□□ 0.52
PHRF1-201ENST00000264555 DENND2CQ68D51 928 aa18.29■□□□□ 0.52
PHRF1-201ENST00000264555 PRCPP42785 496 aa18.29■□□□□ 0.52
PHRF1-201ENST00000264555 ZNF354CQ86Y25 554 aa18.29■□□□□ 0.52
PHRF1-201ENST00000264555 MKRN1Q9UHC7 482 aaKnown RBP18.29■□□□□ 0.52
PHRF1-201ENST00000264555 SUGT1Q9Y2Z0 365 aa18.29■□□□□ 0.52
PHRF1-201ENST00000264555 GOLGA8KD6RF30 607 aa18.28■□□□□ 0.52
PHRF1-201ENST00000264555 CLIC2O15247 247 aa18.28■□□□□ 0.52
PHRF1-201ENST00000264555 SERPING1P05155 500 aa18.28■□□□□ 0.52
PHRF1-201ENST00000264555 HOXA13P31271 388 aaPredicted RBP18.28■□□□□ 0.52
PHRF1-201ENST00000264555 CTNNA1P35221 906 aaKnown RBP18.28■□□□□ 0.52
PHRF1-201ENST00000264555 VPS72Q15906 364 aa18.28■□□□□ 0.52
PHRF1-201ENST00000264555 GJD4Q96KN9 370 aaPredicted RBP18.28■□□□□ 0.52
PHRF1-201ENST00000264555 EPB41L4AQ9HCS5 686 aaPredicted RBP18.28■□□□□ 0.52
PHRF1-201ENST00000264555 JRKLQ9Y4A0 524 aa18.28■□□□□ 0.52
PHRF1-201ENST00000264555 SLIT1O75093 1534 aa18.28■□□□□ 0.52
PHRF1-201ENST00000264555 CACNB3P54284 484 aa18.28■□□□□ 0.52
PHRF1-201ENST00000264555 TTLL6Q8N841 843 aa18.28■□□□□ 0.52
PHRF1-201ENST00000264555 PHF20Q9BVI0 1012 aa18.28■□□□□ 0.52
PHRF1-201ENST00000264555 CTDNEP1O95476 244 aa18.28■□□□□ 0.52
PHRF1-201ENST00000264555 FDPSP14324 419 aaKnown RBP18.28■□□□□ 0.52
PHRF1-201ENST00000264555 CCDC14Q49A88 953 aa18.28■□□□□ 0.52
PHRF1-201ENST00000264555 C10orf76Q5T2E6 689 aa18.28■□□□□ 0.52
PHRF1-201ENST00000264555 RNF14Q9UBS8 474 aa18.28■□□□□ 0.52
PHRF1-201ENST00000264555 PCDHA6Q9UN73 950 aa18.28■□□□□ 0.52
PHRF1-201ENST00000264555 PCDHA8Q9Y5H6 950 aa18.28■□□□□ 0.52
PHRF1-201ENST00000264555 HNRNPDLO14979 420 aaKnown RBP18.27■□□□□ 0.52
PHRF1-201ENST00000264555 TRPC6Q9Y210 931 aa18.27■□□□□ 0.52
PHRF1-201ENST00000264555 FAM169AQ9Y6X4 670 aa18.27■□□□□ 0.52
PHRF1-201ENST00000264555 MYOM1P52179 1685 aa18.27■□□□□ 0.52
PHRF1-201ENST00000264555 MEGF6O75095 1541 aa18.27■□□□□ 0.52
PHRF1-201ENST00000264555 FAM160B1Q5W0V3 765 aa18.27■□□□□ 0.52
PHRF1-201ENST00000264555 FAM71BQ8TC56 605 aa18.27■□□□□ 0.52
PHRF1-201ENST00000264555 CDHR1Q96JP9 859 aa18.27■□□□□ 0.52
PHRF1-201ENST00000264555 NT5C1BQ96P26 610 aa18.27■□□□□ 0.52
PHRF1-201ENST00000264555 POTEMA6NI47 508 aa18.27■□□□□ 0.52
PHRF1-201ENST00000264555 LRRIQ4A6NIV6 560 aa18.27■□□□□ 0.52
PHRF1-201ENST00000264555 BPIFB4P59827 614 aa18.27■□□□□ 0.52
PHRF1-201ENST00000264555 PPP2R5AQ15172 486 aa18.27■□□□□ 0.52
PHRF1-201ENST00000264555 TXNRD1Q16881 649 aa18.27■□□□□ 0.52
PHRF1-201ENST00000264555 BARGINQ6ZT62 677 aa18.27■□□□□ 0.52
PHRF1-201ENST00000264555 METTL16Q86W50 562 aaKnown RBP18.27■□□□□ 0.52
PHRF1-201ENST00000264555 FAM133AQ8N9E0 248 aa18.27■□□□□ 0.52
PHRF1-201ENST00000264555 RAD54LQ92698 747 aa18.27■□□□□ 0.52
PHRF1-201ENST00000264555 PCDHA13Q9Y5I0 950 aa18.27■□□□□ 0.52
PHRF1-201ENST00000264555 COMMD10Q9Y6G5 202 aa18.27■□□□□ 0.52
PHRF1-201ENST00000264555 PTPROQ16827 1216 aa18.27■□□□□ 0.51
PHRF1-201ENST00000264555 RCSD1Q6JBY9 416 aa18.27■□□□□ 0.51
PHRF1-201ENST00000264555 PROM2Q8N271 834 aa18.27■□□□□ 0.51
PHRF1-201ENST00000264555 MYO3BQ8WXR4 1341 aa18.27■□□□□ 0.51
PHRF1-201ENST00000264555 SORBS3O60504 671 aa18.27■□□□□ 0.51
PHRF1-201ENST00000264555 MIGA2Q7L4E1 593 aa18.27■□□□□ 0.51
PHRF1-201ENST00000264555 C10orf67Q8IYJ2 551 aa18.27■□□□□ 0.51
PHRF1-201ENST00000264555 METTL13Q8N6R0 699 aa18.27■□□□□ 0.51
PHRF1-201ENST00000264555 BHMT2Q9H2M3 363 aa18.27■□□□□ 0.51
PHRF1-201ENST00000264555 DCCP43146 1447 aa18.27■□□□□ 0.51
PHRF1-201ENST00000264555 E7EVH7 732 aa18.26■□□□□ 0.51
PHRF1-201ENST00000264555 KIF11P52732 1056 aa18.26■□□□□ 0.51
PHRF1-201ENST00000264555 NCAPG2Q86XI2 1143 aa18.26■□□□□ 0.51
PHRF1-201ENST00000264555 SULF1Q8IWU6 871 aa18.26■□□□□ 0.51
PHRF1-201ENST00000264555 STAG2Q8N3U4 1231 aa18.26■□□□□ 0.51
PHRF1-201ENST00000264555 ABHD10Q9NUJ1 306 aa18.26■□□□□ 0.51
PHRF1-201ENST00000264555 GCNT4Q9P109 453 aa18.26■□□□□ 0.51
PHRF1-201ENST00000264555 USP17L10C9JJH3 530 aa18.26■□□□□ 0.51
PHRF1-201ENST00000264555 ITPK1Q13572 414 aa18.26■□□□□ 0.51
PHRF1-201ENST00000264555 GADL1Q6ZQY3 521 aa18.26■□□□□ 0.51
PHRF1-201ENST00000264555 LINC00116Q8NCU8 138 aa18.26■□□□□ 0.51
PHRF1-201ENST00000264555 GRK7Q8WTQ7 553 aa18.26■□□□□ 0.51
PHRF1-201ENST00000264555 FAM170AA1A519 330 aa18.26■□□□□ 0.51
PHRF1-201ENST00000264555 CCDC151A5D8V7 595 aa18.26■□□□□ 0.51
PHRF1-201ENST00000264555 TRIM49BA6NDI0 452 aa18.26■□□□□ 0.51
PHRF1-201ENST00000264555 FOXN1O15353 648 aa18.26■□□□□ 0.51
PHRF1-201ENST00000264555 ECE2O60344 883 aa18.26■□□□□ 0.51
PHRF1-201ENST00000264555 TNNC2P02585 160 aa18.26■□□□□ 0.51
PHRF1-201ENST00000264555 ASNSP08243 561 aa18.26■□□□□ 0.51
PHRF1-201ENST00000264555 IQCB1Q15051 598 aa18.26■□□□□ 0.51
PHRF1-201ENST00000264555 DCPSQ96C86 337 aaKnown RBP18.26■□□□□ 0.51
PHRF1-201ENST00000264555 GRM1Q13255 1194 aa18.26■□□□□ 0.51
PHRF1-201ENST00000264555 UAP1Q16222 522 aaPredicted RBP18.26■□□□□ 0.51
PHRF1-201ENST00000264555 TOGARAM2Q6ZUX3 1019 aa18.26■□□□□ 0.51
PHRF1-201ENST00000264555 SPZ1Q9BXG8 430 aa18.26■□□□□ 0.51
PHRF1-201ENST00000264555 SEPT9Q9UHD8 586 aaPredicted RBP18.26■□□□□ 0.51
PHRF1-201ENST00000264555 ALDH3A1P30838 453 aa18.25■□□□□ 0.51
PHRF1-201ENST00000264555 SNAP25P60880 206 aa18.25■□□□□ 0.51
PHRF1-201ENST00000264555 APBA1Q02410 837 aa18.25■□□□□ 0.51
PHRF1-201ENST00000264555 GUCY2DQ02846 1103 aa18.25■□□□□ 0.51
PHRF1-201ENST00000264555 TTC31Q49AM3 519 aaPredicted RBP18.25■□□□□ 0.51
PHRF1-201ENST00000264555 CEP85LQ5SZL2 805 aa18.25■□□□□ 0.51
PHRF1-201ENST00000264555 SUGCTQ9HAC7 445 aa18.25■□□□□ 0.51
PHRF1-201ENST00000264555 KMT5AQ9NQR1 393 aa18.25■□□□□ 0.51
PHRF1-201ENST00000264555 MXRA7P84157 204 aa18.25■□□□□ 0.51
PHRF1-201ENST00000264555 PTK2Q05397 1052 aa18.25■□□□□ 0.51
PHRF1-201ENST00000264555 ALCAMQ13740 583 aa18.25■□□□□ 0.51
PHRF1-201ENST00000264555 FBXO33Q7Z6M2 555 aa18.25■□□□□ 0.51
PHRF1-201ENST00000264555 PDE11AQ9HCR9 933 aa18.25■□□□□ 0.51
PHRF1-201ENST00000264555 CCND2P30279 289 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms