RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 MASTLQ96GX5 879 aa13.83□□□□□ -0.19
HERC6-201ENST00000264346 TSGA10Q9BZW7 698 aa13.83□□□□□ -0.19
HERC6-201ENST00000264346 PCIF1Q9H4Z3 704 aa13.83□□□□□ -0.19
HERC6-201ENST00000264346 ABCB6Q9NP58 842 aa13.83□□□□□ -0.19
HERC6-201ENST00000264346 INTS13Q9NVM9 706 aa13.83□□□□□ -0.19
HERC6-201ENST00000264346 LCMT1Q9UIC8 334 aa13.83□□□□□ -0.19
HERC6-201ENST00000264346 KCNK3O14649 394 aa13.83□□□□□ -0.2
HERC6-201ENST00000264346 KIF11P52732 1056 aa13.83□□□□□ -0.2
HERC6-201ENST00000264346 WHAMMP3Q1A5X7 153 aa13.83□□□□□ -0.2
HERC6-201ENST00000264346 VWA3BQ502W6 1294 aa13.83□□□□□ -0.2
HERC6-201ENST00000264346 ODR4Q5SWX8 454 aa13.83□□□□□ -0.2
HERC6-201ENST00000264346 AMIGO3Q86WK7 504 aa13.83□□□□□ -0.2
HERC6-201ENST00000264346 SPZ1Q9BXG8 430 aa13.83□□□□□ -0.2
HERC6-201ENST00000264346 GLT8D2Q9H1C3 349 aa13.83□□□□□ -0.2
HERC6-201ENST00000264346 LRRC4BQ9NT99 713 aa13.83□□□□□ -0.2
HERC6-201ENST00000264346 STK17AQ9UEE5 414 aa13.83□□□□□ -0.2
HERC6-201ENST00000264346 COL4A3BPQ9Y5P4 624 aa13.83□□□□□ -0.2
HERC6-201ENST00000264346 LRRC37A3O60309 1634 aa13.83□□□□□ -0.2
HERC6-201ENST00000264346 CALUO43852 315 aaPredicted RBP13.83□□□□□ -0.2
HERC6-201ENST00000264346 LRRN2O75325 713 aa13.83□□□□□ -0.2
HERC6-201ENST00000264346 ZNF543Q08ER8 600 aa13.83□□□□□ -0.2
HERC6-201ENST00000264346 SYDE2Q5VT97 1194 aa13.83□□□□□ -0.2
HERC6-201ENST00000264346 NAP1L4Q99733 375 aaKnown RBP13.83□□□□□ -0.2
HERC6-201ENST00000264346 RGL1Q9NZL6 768 aa13.83□□□□□ -0.2
HERC6-201ENST00000264346 LRRC53A6NM62 1247 aa13.82□□□□□ -0.2
HERC6-201ENST00000264346 GCOM1H8Y6P7 765 aaPredicted RBP13.82□□□□□ -0.2
HERC6-201ENST00000264346 POLR2MP0CAP2 368 aa13.82□□□□□ -0.2
HERC6-201ENST00000264346 ARHGAP4P98171 946 aa13.82□□□□□ -0.2
HERC6-201ENST00000264346 FAM83BQ5T0W9 1011 aa13.82□□□□□ -0.2
HERC6-201ENST00000264346 TTC19Q6DKK2 380 aaPredicted RBP13.82□□□□□ -0.2
HERC6-201ENST00000264346 UNC13DQ70J99 1090 aa13.82□□□□□ -0.2
HERC6-201ENST00000264346 ZNF446Q9NWS9 450 aa13.82□□□□□ -0.2
HERC6-201ENST00000264346 PALM3A6NDB9 673 aaPredicted RBP13.82□□□□□ -0.2
HERC6-201ENST00000264346 NCK2O43639 380 aa13.82□□□□□ -0.2
HERC6-201ENST00000264346 ATP2C2O75185 946 aa13.82□□□□□ -0.2
HERC6-201ENST00000264346 TADA3O75528 432 aa13.82□□□□□ -0.2
HERC6-201ENST00000264346 HPDP32754 393 aaPredicted RBP13.82□□□□□ -0.2
HERC6-201ENST00000264346 CDR1P51861 262 aa13.82□□□□□ -0.2
HERC6-201ENST00000264346 GFPT1Q06210 699 aaPredicted RBP13.82□□□□□ -0.2
HERC6-201ENST00000264346 NIM1KQ8IY84 436 aa13.82□□□□□ -0.2
HERC6-201ENST00000264346 CNKSR1Q969H4 720 aa13.82□□□□□ -0.2
HERC6-201ENST00000264346 CCSER1Q9C0I3 900 aa13.82□□□□□ -0.2
HERC6-201ENST00000264346 JMJD4Q9H9V9 463 aa13.82□□□□□ -0.2
HERC6-201ENST00000264346 CCPG1Q9ULG6 757 aa13.82□□□□□ -0.2
HERC6-201ENST00000264346 PCDHAC2Q9Y5I4 1007 aa13.82□□□□□ -0.2
HERC6-201ENST00000264346 ZNF185O15231 689 aa13.82□□□□□ -0.2
HERC6-201ENST00000264346 ADRA2BP18089 450 aa13.82□□□□□ -0.2
HERC6-201ENST00000264346 TRIM58Q8NG06 486 aa13.82□□□□□ -0.2
HERC6-201ENST00000264346 ZMYND12Q9H0C1 365 aa13.82□□□□□ -0.2
HERC6-201ENST00000264346 SUGCTQ9HAC7 445 aa13.82□□□□□ -0.2
HERC6-201ENST00000264346 ZNF277Q9NRM2 450 aaPredicted RBP13.82□□□□□ -0.2
HERC6-201ENST00000264346 FLOT1O75955 427 aa13.81□□□□□ -0.2
HERC6-201ENST00000264346 TNFAIP3P21580 790 aa13.81□□□□□ -0.2
HERC6-201ENST00000264346 HMGB2P26583 209 aaKnown RBP13.81□□□□□ -0.2
HERC6-201ENST00000264346 COASYQ13057 564 aa13.81□□□□□ -0.2
HERC6-201ENST00000264346 TRAF1Q13077 416 aa13.81□□□□□ -0.2
HERC6-201ENST00000264346 EXOC3L4Q17RC7 722 aa13.81□□□□□ -0.2
HERC6-201ENST00000264346 TMED8Q6PL24 325 aaPredicted RBP13.81□□□□□ -0.2
HERC6-201ENST00000264346 CCDC25Q86WR0 208 aa13.81□□□□□ -0.2
HERC6-201ENST00000264346 SP8Q8IXZ3 490 aa13.81□□□□□ -0.2
HERC6-201ENST00000264346 SLFN12Q8IYM2 578 aa13.81□□□□□ -0.2
HERC6-201ENST00000264346 CHURC1Q8WUH1 139 aa13.81□□□□□ -0.2
HERC6-201ENST00000264346 SELENOOQ9BVL4 669 aa13.81□□□□□ -0.2
HERC6-201ENST00000264346 MYO1AQ9UBC5 1043 aa13.81□□□□□ -0.2
HERC6-201ENST00000264346 PLEKP08567 350 aaPredicted RBP13.81□□□□□ -0.2
HERC6-201ENST00000264346 STAT2P52630 851 aa13.81□□□□□ -0.2
HERC6-201ENST00000264346 MDM2Q00987 491 aaPredicted RBP13.81□□□□□ -0.2
HERC6-201ENST00000264346 SFR1Q86XK3 245 aa13.81□□□□□ -0.2
HERC6-201ENST00000264346 RAD54LQ92698 747 aa13.81□□□□□ -0.2
HERC6-201ENST00000264346 PACSIN2Q9UNF0 486 aaPredicted RBP13.81□□□□□ -0.2
HERC6-201ENST00000264346 DUSP10Q9Y6W6 482 aa13.81□□□□□ -0.2
HERC6-201ENST00000264346 MYO1CO00159 1063 aa13.81□□□□□ -0.2
HERC6-201ENST00000264346 ATP1A1P05023 1023 aaKnown RBP13.81□□□□□ -0.2
HERC6-201ENST00000264346 BRD3Q15059 726 aa13.81□□□□□ -0.2
HERC6-201ENST00000264346 IFI16Q16666 785 aaKnown RBP13.81□□□□□ -0.2
HERC6-201ENST00000264346 PDXDC2PQ6P474 469 aa13.81□□□□□ -0.2
HERC6-201ENST00000264346 MIER3Q7Z3K6 550 aa13.81□□□□□ -0.2
HERC6-201ENST00000264346 DDX4Q9NQI0 724 aaKnown RBP13.81□□□□□ -0.2
HERC6-201ENST00000264346 SMARCAL1Q9NZC9 954 aa13.81□□□□□ -0.2
HERC6-201ENST00000264346 ATP6V0A2Q9Y487 856 aa13.81□□□□□ -0.2
HERC6-201ENST00000264346 GSTTP1A0A1W2PQM5 241 aa13.8□□□□□ -0.2
HERC6-201ENST00000264346 KIAA0754O94854 1291 aa13.8□□□□□ -0.2
HERC6-201ENST00000264346 KRT5P13647 590 aa13.8□□□□□ -0.2
HERC6-201ENST00000264346 ZNF18P17022 549 aa13.8□□□□□ -0.2
HERC6-201ENST00000264346 PPP4CP60510 307 aa13.8□□□□□ -0.2
HERC6-201ENST00000264346 ERVK-24P63145 666 aa13.8□□□□□ -0.2
HERC6-201ENST00000264346 RPS6KA1Q15418 735 aa13.8□□□□□ -0.2
HERC6-201ENST00000264346 CFAP58Q5T655 872 aa13.8□□□□□ -0.2
HERC6-201ENST00000264346 SCLT1Q96NL6 688 aa13.8□□□□□ -0.2
HERC6-201ENST00000264346 MAGEF1Q9HAY2 307 aa13.8□□□□□ -0.2
HERC6-201ENST00000264346 LIMA1Q9UHB6 759 aaKnown RBP13.8□□□□□ -0.2
HERC6-201ENST00000264346 MRFAP1Q9Y605 127 aa13.8□□□□□ -0.2
HERC6-201ENST00000264346 IL17AQ16552 155 aa13.8□□□□□ -0.2
HERC6-201ENST00000264346 RNF187Q5TA31 235 aaPredicted RBP13.8□□□□□ -0.2
HERC6-201ENST00000264346 PEX26Q7Z412 305 aa13.8□□□□□ -0.2
HERC6-201ENST00000264346 ZFPM1Q8IX07 1006 aa13.8□□□□□ -0.2
HERC6-201ENST00000264346 ZNF577Q9BSK1 485 aa13.8□□□□□ -0.2
HERC6-201ENST00000264346 DHX36Q9H2U1 1008 aaKnown RBP13.8□□□□□ -0.2
HERC6-201ENST00000264346 PCDHA13Q9Y5I0 950 aa13.8□□□□□ -0.2
HERC6-201ENST00000264346 KCPQ6ZWJ8 1503 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms