RNA–Protein interactions for RNA: ENST00000264107.11

ITGA6-201, Transcript of integrin subunit alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA6, Length 5,618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-201ENST00000264107 SEC24CP53992 1094 aa19.47■□□□□ 0.71
ITGA6-201ENST00000264107 KAZNQ674X7 775 aa19.47■□□□□ 0.71
ITGA6-201ENST00000264107 EPM2AIP1Q7L775 607 aaPredicted RBP19.47■□□□□ 0.71
ITGA6-201ENST00000264107 CCDC125Q86Z20 511 aa19.47■□□□□ 0.71
ITGA6-201ENST00000264107 WDR75Q8IWA0 830 aaKnown RBP19.47■□□□□ 0.71
ITGA6-201ENST00000264107 SH3GL2Q99962 352 aa19.47■□□□□ 0.71
ITGA6-201ENST00000264107 CUEDC2Q9H467 287 aa19.47■□□□□ 0.71
ITGA6-201ENST00000264107 TAF1DQ9H5J8 278 aaPredicted RBP19.47■□□□□ 0.71
ITGA6-201ENST00000264107 RMI1Q9H9A7 625 aa19.47■□□□□ 0.71
ITGA6-201ENST00000264107 DCTN4Q9UJW0 460 aa19.47■□□□□ 0.71
ITGA6-201ENST00000264107 ATP10BO94823 1461 aa19.46■□□□□ 0.71
ITGA6-201ENST00000264107 RASA4BC9J798 803 aa19.46■□□□□ 0.71
ITGA6-201ENST00000264107 RASA4O43374 803 aa19.46■□□□□ 0.71
ITGA6-201ENST00000264107 FAM107AO95990 144 aa19.46■□□□□ 0.71
ITGA6-201ENST00000264107 ATG16L1Q676U5 607 aa19.46■□□□□ 0.71
ITGA6-201ENST00000264107 SLC26A7Q8TE54 656 aa19.46■□□□□ 0.71
ITGA6-201ENST00000264107 UPF3AQ9H1J1 476 aaKnown RBP19.46■□□□□ 0.71
ITGA6-201ENST00000264107 CCDC87Q9NVE4 849 aa19.46■□□□□ 0.71
ITGA6-201ENST00000264107 DNAJC17Q9NVM6 304 aaKnown RBP19.46■□□□□ 0.71
ITGA6-201ENST00000264107 TMOD3Q9NYL9 352 aa19.46■□□□□ 0.71
ITGA6-201ENST00000264107 GRAMD1AQ96CP6 724 aa19.46■□□□□ 0.71
ITGA6-201ENST00000264107 VCPKMTQ9H867 229 aa19.46■□□□□ 0.71
ITGA6-201ENST00000264107 WDR46O15213 610 aaKnown RBP19.46■□□□□ 0.71
ITGA6-201ENST00000264107 PMS2P54278 862 aa19.46■□□□□ 0.71
ITGA6-201ENST00000264107 TRPM8Q7Z2W7 1104 aa19.46■□□□□ 0.71
ITGA6-201ENST00000264107 SIKE1Q9BRV8 207 aa19.46■□□□□ 0.71
ITGA6-201ENST00000264107 CARD9Q9H257 536 aa19.46■□□□□ 0.71
ITGA6-201ENST00000264107 CNGB3Q9NQW8 809 aa19.46■□□□□ 0.71
ITGA6-201ENST00000264107 ZBTB21Q9ULJ3 1066 aa19.46■□□□□ 0.71
ITGA6-201ENST00000264107 SNX24Q9Y343 169 aa19.46■□□□□ 0.71
ITGA6-201ENST00000264107 FOXO3O43524 673 aa19.46■□□□□ 0.71
ITGA6-201ENST00000264107 PGBD1Q96JS3 809 aa19.46■□□□□ 0.71
ITGA6-201ENST00000264107 CCT8L1PA6NM43 557 aa19.45■□□□□ 0.7
ITGA6-201ENST00000264107 CTDSPL2Q05D32 466 aa19.45■□□□□ 0.7
ITGA6-201ENST00000264107 ZNF658Q5TYW1 1059 aaPredicted RBP19.45■□□□□ 0.7
ITGA6-201ENST00000264107 SRRM1Q8IYB3 904 aaKnown RBP19.45■□□□□ 0.7
ITGA6-201ENST00000264107 KIF2BQ8N4N8 673 aa19.45■□□□□ 0.7
ITGA6-201ENST00000264107 KIFC3Q9BVG8 833 aa19.45■□□□□ 0.7
ITGA6-201ENST00000264107 COL17A1Q9UMD9 1497 aaPredicted RBP19.45■□□□□ 0.7
ITGA6-201ENST00000264107 EIF4A2Q14240 407 aaKnown RBP19.45■□□□□ 0.7
ITGA6-201ENST00000264107 MAP4K1Q92918 833 aa19.45■□□□□ 0.7
ITGA6-201ENST00000264107 DHTKD1Q96HY7 919 aaPredicted RBP19.45■□□□□ 0.7
ITGA6-201ENST00000264107 FUT8Q9BYC5 575 aa19.45■□□□□ 0.7
ITGA6-201ENST00000264107 OSBPL3Q9H4L5 887 aa19.45■□□□□ 0.7
ITGA6-201ENST00000264107 ATP11BQ9Y2G3 1177 aa19.45■□□□□ 0.7
ITGA6-201ENST00000264107 CFAP69A5D8W1 941 aa19.45■□□□□ 0.7
ITGA6-201ENST00000264107 ZNF189O75820 626 aaPredicted RBP19.45■□□□□ 0.7
ITGA6-201ENST00000264107 PDE1BQ01064 536 aa19.45■□□□□ 0.7
ITGA6-201ENST00000264107 BZW1Q7L1Q6 419 aaKnown RBP19.45■□□□□ 0.7
ITGA6-201ENST00000264107 MYCT1Q8N699 235 aa19.45■□□□□ 0.7
ITGA6-201ENST00000264107 IQCB1Q15051 598 aa19.45■□□□□ 0.7
ITGA6-201ENST00000264107 CYTH1Q15438 398 aa19.45■□□□□ 0.7
ITGA6-201ENST00000264107 EXOC3L4Q17RC7 722 aa19.45■□□□□ 0.7
ITGA6-201ENST00000264107 DNM3Q9UQ16 869 aa19.45■□□□□ 0.7
ITGA6-201ENST00000264107 TPD52L2O43399 206 aaKnown RBP19.45■□□□□ 0.7
ITGA6-201ENST00000264107 ATP1A1P05023 1023 aaKnown RBP19.45■□□□□ 0.7
ITGA6-201ENST00000264107 MRPL12P52815 198 aaKnown RBP19.45■□□□□ 0.7
ITGA6-201ENST00000264107 NFRKBQ6P4R8 1299 aa19.45■□□□□ 0.7
ITGA6-201ENST00000264107 MB21D1Q8N884 522 aa19.45■□□□□ 0.7
ITGA6-201ENST00000264107 RUBCNQ92622 972 aa19.45■□□□□ 0.7
ITGA6-201ENST00000264107 EDC3Q96F86 508 aaKnown RBP19.45■□□□□ 0.7
ITGA6-201ENST00000264107 TRPV6Q9H1D0 765 aa19.45■□□□□ 0.7
ITGA6-201ENST00000264107 BRAFP15056 766 aa19.44■□□□□ 0.7
ITGA6-201ENST00000264107 HDAC4P56524 1084 aa19.44■□□□□ 0.7
ITGA6-201ENST00000264107 AP1B1Q10567 949 aa19.44■□□□□ 0.7
ITGA6-201ENST00000264107 UNC5CLQ8IV45 518 aa19.44■□□□□ 0.7
ITGA6-201ENST00000264107 TBC1D22AQ8WUA7 517 aa19.44■□□□□ 0.7
ITGA6-201ENST00000264107 P2RX5Q93086 422 aa19.44■□□□□ 0.7
ITGA6-201ENST00000264107 PRMT1Q99873 361 aaKnown RBP19.44■□□□□ 0.7
ITGA6-201ENST00000264107 RIMS2Q9UQ26 1411 aa19.44■□□□□ 0.7
ITGA6-201ENST00000264107 NOP56O00567 594 aaKnown RBP19.44■□□□□ 0.7
ITGA6-201ENST00000264107 FGGP02679 453 aa19.44■□□□□ 0.7
ITGA6-201ENST00000264107 GARSP41250 739 aaKnown RBP19.44■□□□□ 0.7
ITGA6-201ENST00000264107 TSPY1Q01534 308 aa19.44■□□□□ 0.7
ITGA6-201ENST00000264107 TRIP13Q15645 432 aaPredicted RBP19.44■□□□□ 0.7
ITGA6-201ENST00000264107 PTGISQ16647 500 aa19.44■□□□□ 0.7
ITGA6-201ENST00000264107 CRLF3Q8IUI8 442 aa19.44■□□□□ 0.7
ITGA6-201ENST00000264107 HNRNPLLQ8WVV9 542 aaKnown RBP19.44■□□□□ 0.7
ITGA6-201ENST00000264107 MIEF2Q96C03 454 aa19.44■□□□□ 0.7
ITGA6-201ENST00000264107 LBHD1Q9BQE6 289 aaPredicted RBP19.44■□□□□ 0.7
ITGA6-201ENST00000264107 ARMT1Q9H993 441 aa19.44■□□□□ 0.7
ITGA6-201ENST00000264107 MAGEA13PA6NCF6 341 aa19.44■□□□□ 0.7
ITGA6-201ENST00000264107 PALMO75781 387 aa19.44■□□□□ 0.7
ITGA6-201ENST00000264107 NYAP1Q6ZVC0 841 aa19.44■□□□□ 0.7
ITGA6-201ENST00000264107 PARP3Q9Y6F1 533 aa19.44■□□□□ 0.7
ITGA6-201ENST00000264107 IGF2BP3O00425 579 aaKnown RBP eCLIP19.44■□□□□ 0.71e-6■■■□□ 18
ITGA6-201ENST00000264107 MKRN3Q13064 507 aaKnown RBP19.44■□□□□ 0.7
ITGA6-201ENST00000264107 MAN2A1Q16706 1144 aa19.44■□□□□ 0.7
ITGA6-201ENST00000264107 RDH13Q8NBN7 331 aa19.44■□□□□ 0.7
ITGA6-201ENST00000264107 LCMT1Q9UIC8 334 aa19.44■□□□□ 0.7
ITGA6-201ENST00000264107 FBXL5Q9UKA1 691 aa19.44■□□□□ 0.7
ITGA6-201ENST00000264107 STRIP2Q9ULQ0 834 aa19.44■□□□□ 0.7
ITGA6-201ENST00000264107 SERPING1P05155 500 aa19.43■□□□□ 0.7
ITGA6-201ENST00000264107 GSTA1P08263 222 aa19.43■□□□□ 0.7
ITGA6-201ENST00000264107 GSTA2P09210 222 aa19.43■□□□□ 0.7
ITGA6-201ENST00000264107 PDHBP11177 359 aa19.43■□□□□ 0.7
ITGA6-201ENST00000264107 STX1BP61266 288 aa19.43■□□□□ 0.7
ITGA6-201ENST00000264107 CCNI2Q6ZMN8 369 aaPredicted RBP19.43■□□□□ 0.7
ITGA6-201ENST00000264107 FAM133AQ8N9E0 248 aa19.43■□□□□ 0.7
ITGA6-201ENST00000264107 IRX2Q9BZI1 471 aaPredicted RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms