RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 ZNF697Q5TEC3 545 aa18.5■□□□□ 0.55
USE1-201ENST00000263897 PCNX4Q63HM2 1172 aa18.5■□□□□ 0.55
USE1-201ENST00000263897 RPUSD2Q8IZ73 545 aaKnown RBP18.5■□□□□ 0.55
USE1-201ENST00000263897 HERVK_113Q902F9 699 aa18.5■□□□□ 0.55
USE1-201ENST00000263897 SCLYQ96I15 445 aa18.5■□□□□ 0.55
USE1-201ENST00000263897 JAKMIP1Q96N16 626 aaKnown RBP18.5■□□□□ 0.55
USE1-201ENST00000263897 SEMA6BQ9H3T3 888 aa18.5■□□□□ 0.55
USE1-201ENST00000263897 MLXIPQ9HAP2 919 aa18.5■□□□□ 0.55
USE1-201ENST00000263897 FAM217BQ9NTX9 383 aaPredicted RBP18.5■□□□□ 0.55
USE1-201ENST00000263897 HAS3O00219 553 aa18.49■□□□□ 0.55
USE1-201ENST00000263897 SORBS3O60504 671 aa18.49■□□□□ 0.55
USE1-201ENST00000263897 PSEN2P49810 448 aa18.49■□□□□ 0.55
USE1-201ENST00000263897 RCAN1P53805 252 aa18.49■□□□□ 0.55
USE1-201ENST00000263897 FGD1P98174 961 aa18.49■□□□□ 0.55
USE1-201ENST00000263897 PTGISQ16647 500 aa18.49■□□□□ 0.55
USE1-201ENST00000263897 HEATR3Q7Z4Q2 680 aa18.49■□□□□ 0.55
USE1-201ENST00000263897 VWCEQ96DN2 955 aa18.49■□□□□ 0.55
USE1-201ENST00000263897 FAM161BQ96MY7 647 aa18.49■□□□□ 0.55
USE1-201ENST00000263897 BCAS3Q9H6U6 928 aa18.49■□□□□ 0.55
USE1-201ENST00000263897 STXBP5LQ9Y2K9 1186 aa18.49■□□□□ 0.55
USE1-201ENST00000263897 V9GY48 417 aaPredicted RBP18.49■□□□□ 0.55
USE1-201ENST00000263897 TRIP12Q14669 1992 aaPredicted RBP18.48■□□□□ 0.55
USE1-201ENST00000263897 GOLGA8AA7E2F4 631 aa18.48■□□□□ 0.55
USE1-201ENST00000263897 GOLGA8BA8MQT2 603 aa18.48■□□□□ 0.55
USE1-201ENST00000263897 PITPNM1O00562 1244 aa18.48■□□□□ 0.55
USE1-201ENST00000263897 FIBPO43427 364 aa18.48■□□□□ 0.55
USE1-201ENST00000263897 F2P00734 622 aa18.48■□□□□ 0.55
USE1-201ENST00000263897 SEMA3FQ13275 785 aa18.48■□□□□ 0.55
USE1-201ENST00000263897 NEDD9Q14511 834 aa18.48■□□□□ 0.55
USE1-201ENST00000263897 MFSD10Q14728 455 aa18.48■□□□□ 0.55
USE1-201ENST00000263897 KIAA0753Q2KHM9 967 aa18.48■□□□□ 0.55
USE1-201ENST00000263897 GDF6Q6KF10 455 aaPredicted RBP18.48■□□□□ 0.55
USE1-201ENST00000263897 BLOC1S2Q6QNY1 142 aa18.48■□□□□ 0.55
USE1-201ENST00000263897 Q6ZUG5 572 aa18.48■□□□□ 0.55
USE1-201ENST00000263897 C7orf31Q8N865 590 aa18.48■□□□□ 0.55
USE1-201ENST00000263897 RETREG2Q8NC44 543 aa18.48■□□□□ 0.55
USE1-201ENST00000263897 ALG1Q9BT22 464 aa18.48■□□□□ 0.55
USE1-201ENST00000263897 KATNAL1Q9BW62 490 aa18.48■□□□□ 0.55
USE1-201ENST00000263897 PPP4R2Q9NY27 417 aa18.48■□□□□ 0.55
USE1-201ENST00000263897 HDAC6Q9UBN7 1215 aa18.48■□□□□ 0.55
USE1-201ENST00000263897 NOD1Q9Y239 953 aa18.48■□□□□ 0.55
USE1-201ENST00000263897 CNTNAP5Q8WYK1 1306 aa18.48■□□□□ 0.55
USE1-201ENST00000263897 EPB41L2O43491 1005 aaKnown RBP18.47■□□□□ 0.55
USE1-201ENST00000263897 ZNF286BP0CG31 522 aa18.47■□□□□ 0.55
USE1-201ENST00000263897 CDC27P30260 824 aa18.47■□□□□ 0.55
USE1-201ENST00000263897 BFSP2Q13515 415 aa18.47■□□□□ 0.55
USE1-201ENST00000263897 UBE2SQ16763 222 aa18.47■□□□□ 0.55
USE1-201ENST00000263897 ERICH6BQ5W0A0 696 aa18.47■□□□□ 0.55
USE1-201ENST00000263897 WWC2Q6AWC2 1192 aa18.47■□□□□ 0.55
USE1-201ENST00000263897 OTOP2Q7RTS6 562 aa18.47■□□□□ 0.55
USE1-201ENST00000263897 FBXL16Q8N461 479 aa18.47■□□□□ 0.55
USE1-201ENST00000263897 GUCD1Q96NT3 240 aa18.47■□□□□ 0.55
USE1-201ENST00000263897 CTAGE1Q96RT6 745 aa18.47■□□□□ 0.55
USE1-201ENST00000263897 C16orf70Q9BSU1 422 aa18.47■□□□□ 0.55
USE1-201ENST00000263897 TTYH1Q9H313 450 aaPredicted RBP18.47■□□□□ 0.55
USE1-201ENST00000263897 CXXC1Q9P0U4 656 aaPredicted RBP18.47■□□□□ 0.55
USE1-201ENST00000263897 GTF2IRD1Q9UHL9 959 aa18.47■□□□□ 0.55
USE1-201ENST00000263897 GRXCR1A8MXD5 290 aa18.46■□□□□ 0.55
USE1-201ENST00000263897 IQCF3P0C7M6 154 aa18.46■□□□□ 0.55
USE1-201ENST00000263897 PSMA5P28066 241 aa18.46■□□□□ 0.55
USE1-201ENST00000263897 ADD1P35611 737 aaKnown RBP18.46■□□□□ 0.55
USE1-201ENST00000263897 APOBRQ0VD83 1088 aa18.46■□□□□ 0.55
USE1-201ENST00000263897 CYFIP1Q7L576 1253 aa18.46■□□□□ 0.55
USE1-201ENST00000263897 NLRX1Q86UT6 975 aa18.46■□□□□ 0.55
USE1-201ENST00000263897 BRF1Q92994 677 aa18.46■□□□□ 0.55
USE1-201ENST00000263897 SENP7Q9BQF6 1050 aa18.46■□□□□ 0.55
USE1-201ENST00000263897 MTIF3Q9H2K0 278 aaKnown RBP18.46■□□□□ 0.55
USE1-201ENST00000263897 NAP1L2Q9ULW6 460 aaPredicted RBP18.46■□□□□ 0.55
USE1-201ENST00000263897 PCDHA6Q9UN73 950 aa18.46■□□□□ 0.55
USE1-201ENST00000263897 PCDHA8Q9Y5H6 950 aa18.46■□□□□ 0.55
USE1-201ENST00000263897 LAMA2P24043 3122 aaKnown RBP18.46■□□□□ 0.55
USE1-201ENST00000263897 TMEM265A0A087WTH1 108 aa18.45■□□□□ 0.54
USE1-201ENST00000263897 CCDC196A0A1B0GTZ2 297 aa18.45■□□□□ 0.54
USE1-201ENST00000263897 SPDYE3A6NKU9 549 aa18.45■□□□□ 0.54
USE1-201ENST00000263897 PFKMP08237 780 aa18.45■□□□□ 0.54
USE1-201ENST00000263897 RPS6KB1P23443 525 aa18.45■□□□□ 0.54
USE1-201ENST00000263897 DNAJB2P25686 324 aa18.45■□□□□ 0.54
USE1-201ENST00000263897 RFC2P35250 354 aa18.45■□□□□ 0.54
USE1-201ENST00000263897 NAPAP54920 295 aa18.45■□□□□ 0.54
USE1-201ENST00000263897 TYW1BQ6NUM6 668 aa18.45■□□□□ 0.54
USE1-201ENST00000263897 METTL7BQ6UX53 244 aa18.45■□□□□ 0.54
USE1-201ENST00000263897 DEFB128Q7Z7B8 93 aa18.45■□□□□ 0.54
USE1-201ENST00000263897 TEX2Q8IWB9 1127 aa18.45■□□□□ 0.54
USE1-201ENST00000263897 CAGE1Q8TC20 777 aa18.45■□□□□ 0.54
USE1-201ENST00000263897 GPRASP2Q96D09 838 aa18.45■□□□□ 0.54
USE1-201ENST00000263897 USP26Q9BXU7 913 aa18.45■□□□□ 0.54
USE1-201ENST00000263897 AGXT2Q9BYV1 514 aa18.45■□□□□ 0.54
USE1-201ENST00000263897 RIC8AQ9NPQ8 531 aa18.45■□□□□ 0.54
USE1-201ENST00000263897 SCN5AQ14524 2016 aa18.45■□□□□ 0.54
USE1-201ENST00000263897 MYO9BQ13459 2157 aa18.45■□□□□ 0.54
USE1-201ENST00000263897 H3BRB1 525 aa18.44■□□□□ 0.54
USE1-201ENST00000263897 hCG_1984214I3L0E3 225 aa18.44■□□□□ 0.54
USE1-201ENST00000263897 NOP56O00567 594 aaKnown RBP18.44■□□□□ 0.54
USE1-201ENST00000263897 METAP2P50579 478 aaKnown RBP eCLIP18.44■□□□□ 0.54
USE1-201ENST00000263897 PPP1R18Q6NYC8 613 aa18.44■□□□□ 0.54
USE1-201ENST00000263897 CCDC155Q8N6L0 562 aa18.44■□□□□ 0.54
USE1-201ENST00000263897 ZNF713Q8N859 430 aaPredicted RBP18.44■□□□□ 0.54
USE1-201ENST00000263897 GIMAP8Q8ND71 665 aaPredicted RBP18.44■□□□□ 0.54
USE1-201ENST00000263897 CDX2Q99626 313 aaPredicted RBP18.44■□□□□ 0.54
USE1-201ENST00000263897 GPR20Q99678 358 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms