RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 ZNF215Q9UL58 517 aaPredicted RBP14.41□□□□□ -0.1
SPTLC1-201ENST00000262554 ADGRG1Q9Y653 693 aa14.41□□□□□ -0.1
SPTLC1-201ENST00000262554 FER1L6Q2WGJ9 1857 aa14.4□□□□□ -0.1
SPTLC1-201ENST00000262554 PLA2G6O60733 806 aa14.4□□□□□ -0.1
SPTLC1-201ENST00000262554 ECM2O94769 699 aaPredicted RBP14.4□□□□□ -0.1
SPTLC1-201ENST00000262554 SSBP05455 408 aaKnown RBP eCLIP14.4□□□□□ -0.1
SPTLC1-201ENST00000262554 CYP3A4P08684 503 aa14.4□□□□□ -0.1
SPTLC1-201ENST00000262554 PLA2G4BP0C869 781 aa14.4□□□□□ -0.1
SPTLC1-201ENST00000262554 HOXA13P31271 388 aaPredicted RBP14.4□□□□□ -0.1
SPTLC1-201ENST00000262554 KRT9P35527 623 aa14.4□□□□□ -0.1
SPTLC1-201ENST00000262554 ZNF76P36508 570 aa14.4□□□□□ -0.1
SPTLC1-201ENST00000262554 EHHADHQ08426 723 aa14.4□□□□□ -0.1
SPTLC1-201ENST00000262554 COASYQ13057 564 aa14.4□□□□□ -0.1
SPTLC1-201ENST00000262554 FAM160B2Q86V87 743 aa14.4□□□□□ -0.1
SPTLC1-201ENST00000262554 JDP2Q8WYK2 163 aa14.4□□□□□ -0.1
SPTLC1-201ENST00000262554 DNAJC19Q96DA6 116 aa14.4□□□□□ -0.1
SPTLC1-201ENST00000262554 ZBED3Q96IU2 234 aaPredicted RBP14.4□□□□□ -0.1
SPTLC1-201ENST00000262554 TSG101Q99816 390 aa14.4□□□□□ -0.1
SPTLC1-201ENST00000262554 NOC4LQ9BVI4 516 aaKnown RBP14.4□□□□□ -0.1
SPTLC1-201ENST00000262554 NUP58Q9BVL2 599 aa14.4□□□□□ -0.1
SPTLC1-201ENST00000262554 PANK4Q9NVE7 773 aa14.4□□□□□ -0.1
SPTLC1-201ENST00000262554 ATAD5Q96QE3 1844 aa14.4□□□□□ -0.1
SPTLC1-201ENST00000262554 POTEB3A0JP26 581 aa14.4□□□□□ -0.1
SPTLC1-201ENST00000262554 POTECB2RU33 542 aa14.4□□□□□ -0.1
SPTLC1-201ENST00000262554 E9PMD0 336 aa14.4□□□□□ -0.1
SPTLC1-201ENST00000262554 GNG11P61952 73 aa14.4□□□□□ -0.1
SPTLC1-201ENST00000262554 TSR1Q2NL82 804 aaKnown RBP14.4□□□□□ -0.1
SPTLC1-201ENST00000262554 DALRD3Q5D0E6 543 aaKnown RBP14.4□□□□□ -0.1
SPTLC1-201ENST00000262554 POTEBQ6S5H4 581 aa14.4□□□□□ -0.1
SPTLC1-201ENST00000262554 CCDC65Q8IXS2 484 aa14.4□□□□□ -0.1
SPTLC1-201ENST00000262554 LENG9Q96B70 501 aa14.4□□□□□ -0.1
SPTLC1-201ENST00000262554 TAOK3Q9H2K8 898 aa14.4□□□□□ -0.1
SPTLC1-201ENST00000262554 RANBP17Q9H2T7 1088 aaKnown RBP14.4□□□□□ -0.1
SPTLC1-201ENST00000262554 MYOZ2Q9NPC6 264 aa14.4□□□□□ -0.1
SPTLC1-201ENST00000262554 CAPN11Q9UMQ6 739 aa14.4□□□□□ -0.1
SPTLC1-201ENST00000262554 LUC7L2Q9Y383 392 aaKnown RBP14.4□□□□□ -0.1
SPTLC1-201ENST00000262554 SMCHD1A6NHR9 2005 aa14.39□□□□□ -0.11
SPTLC1-201ENST00000262554 TTC26A0AVF1 554 aa14.39□□□□□ -0.11
SPTLC1-201ENST00000262554 FAM86B1E9PN63 330 aa14.39□□□□□ -0.11
SPTLC1-201ENST00000262554 RNF225M0QZC1 329 aaPredicted RBP14.39□□□□□ -0.11
SPTLC1-201ENST00000262554 WNT10BO00744 389 aa14.39□□□□□ -0.11
SPTLC1-201ENST00000262554 MED24O75448 989 aa14.39□□□□□ -0.11
SPTLC1-201ENST00000262554 ASNSP08243 561 aa14.39□□□□□ -0.11
SPTLC1-201ENST00000262554 FAM86B2P0C5J1 330 aa14.39□□□□□ -0.11
SPTLC1-201ENST00000262554 TAL1P17542 331 aaPredicted RBP14.39□□□□□ -0.11
SPTLC1-201ENST00000262554 CASQ1P31415 396 aa14.39□□□□□ -0.11
SPTLC1-201ENST00000262554 STAT3P40763 770 aa14.39□□□□□ -0.11
SPTLC1-201ENST00000262554 SPIRE1Q08AE8 756 aa14.39□□□□□ -0.11
SPTLC1-201ENST00000262554 TBC1D8BQ0IIM8 1120 aa14.39□□□□□ -0.11
SPTLC1-201ENST00000262554 TNIP1Q15025 636 aa14.39□□□□□ -0.11
SPTLC1-201ENST00000262554 FKBP15Q5T1M5 1219 aa14.39□□□□□ -0.11
SPTLC1-201ENST00000262554 NCAPH2Q6IBW4 605 aa14.39□□□□□ -0.11
SPTLC1-201ENST00000262554 CCDC174Q6PII3 467 aa14.39□□□□□ -0.11
SPTLC1-201ENST00000262554 FOXR2Q6PJQ5 311 aa14.39□□□□□ -0.11
SPTLC1-201ENST00000262554 GPBP1Q86WP2 473 aa14.39□□□□□ -0.11
SPTLC1-201ENST00000262554 MYOCDQ8IZQ8 938 aa14.39□□□□□ -0.11
SPTLC1-201ENST00000262554 RETREG2Q8NC44 543 aa14.39□□□□□ -0.11
SPTLC1-201ENST00000262554 OR8K1Q8NGG5 319 aa14.39□□□□□ -0.11
SPTLC1-201ENST00000262554 KIFC2Q96AC6 838 aa14.39□□□□□ -0.11
SPTLC1-201ENST00000262554 EEF2KMTQ96G04 330 aa14.39□□□□□ -0.11
SPTLC1-201ENST00000262554 EHMT1Q9H9B1 1298 aa14.39□□□□□ -0.11
SPTLC1-201ENST00000262554 FEM1BQ9UK73 627 aa14.39□□□□□ -0.11
SPTLC1-201ENST00000262554 CLEC11AQ9Y240 323 aa14.39□□□□□ -0.11
SPTLC1-201ENST00000262554 ABCB11O95342 1321 aa14.38□□□□□ -0.11
SPTLC1-201ENST00000262554 GCOM1H8Y6P7 765 aaPredicted RBP14.38□□□□□ -0.11
SPTLC1-201ENST00000262554 POLR2MP0CAP2 368 aa14.38□□□□□ -0.11
SPTLC1-201ENST00000262554 MAP3K10Q02779 954 aa14.38□□□□□ -0.11
SPTLC1-201ENST00000262554 ZYXQ15942 572 aaKnown RBP14.38□□□□□ -0.11
SPTLC1-201ENST00000262554 NBPF9Q3BBW0 867 aa14.38□□□□□ -0.11
SPTLC1-201ENST00000262554 FAM26FQ5R3K3 315 aa14.38□□□□□ -0.11
SPTLC1-201ENST00000262554 CDAN1Q8IWY9 1227 aa14.38□□□□□ -0.11
SPTLC1-201ENST00000262554 MRPL44Q9H9J2 332 aaKnown RBP14.38□□□□□ -0.11
SPTLC1-201ENST00000262554 MRPL11Q9Y3B7 192 aaKnown RBP14.38□□□□□ -0.11
SPTLC1-201ENST00000262554 BRCA1P38398 1863 aaKnown RBP14.38□□□□□ -0.11
SPTLC1-201ENST00000262554 MSH4O15457 936 aa14.38□□□□□ -0.11
SPTLC1-201ENST00000262554 URI1O94763 535 aaPredicted RBP14.38□□□□□ -0.11
SPTLC1-201ENST00000262554 CFBP00751 764 aa14.38□□□□□ -0.11
SPTLC1-201ENST00000262554 KRT18P05783 430 aaKnown RBP14.38□□□□□ -0.11
SPTLC1-201ENST00000262554 TRIM21P19474 475 aaKnown RBP14.38□□□□□ -0.11
SPTLC1-201ENST00000262554 RPA1P27694 616 aa14.38□□□□□ -0.11
SPTLC1-201ENST00000262554 POLD1P28340 1107 aa14.38□□□□□ -0.11
SPTLC1-201ENST00000262554 ERVK-24P63145 666 aa14.38□□□□□ -0.11
SPTLC1-201ENST00000262554 MIIPQ5JXC2 388 aa14.38□□□□□ -0.11
SPTLC1-201ENST00000262554 PDCL2Q8N4E4 241 aa14.38□□□□□ -0.11
SPTLC1-201ENST00000262554 DNAJC7Q99615 494 aa14.38□□□□□ -0.11
SPTLC1-201ENST00000262554 PGAP2Q9UHJ9 254 aa14.38□□□□□ -0.11
SPTLC1-201ENST00000262554 PITPNM2Q9BZ72 1349 aa14.37□□□□□ -0.11
SPTLC1-201ENST00000262554 POTEFA5A3E0 1075 aa14.37□□□□□ -0.11
SPTLC1-201ENST00000262554 KIF20AO95235 890 aa14.37□□□□□ -0.11
SPTLC1-201ENST00000262554 ZBTB7AO95365 584 aa14.37□□□□□ -0.11
SPTLC1-201ENST00000262554 POTEIP0CG38 1075 aa14.37□□□□□ -0.11
SPTLC1-201ENST00000262554 CYP11B2P19099 503 aa14.37□□□□□ -0.11
SPTLC1-201ENST00000262554 TNFAIP1Q13829 316 aa14.37□□□□□ -0.11
SPTLC1-201ENST00000262554 LRRC41Q15345 812 aa14.37□□□□□ -0.11
SPTLC1-201ENST00000262554 POTEGQ6S5H5 508 aa14.37□□□□□ -0.11
SPTLC1-201ENST00000262554 POTEEQ6S8J3 1075 aa14.37□□□□□ -0.11
SPTLC1-201ENST00000262554 CATSPER3Q86XQ3 398 aa14.37□□□□□ -0.11
SPTLC1-201ENST00000262554 IQCDQ96DY2 449 aa14.37□□□□□ -0.11
SPTLC1-201ENST00000262554 PCMTD1Q96MG8 357 aaPredicted RBP14.37□□□□□ -0.11
SPTLC1-201ENST00000262554 ERGIC2Q96RQ1 377 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms