RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 TSR1Q2NL82 804 aaKnown RBP25.04■■□□□ 1.6
MCF2L-201ENST00000261963 KRT79Q5XKE5 535 aa25.04■■□□□ 1.6
MCF2L-201ENST00000261963 GJA10Q969M2 543 aa25.04■■□□□ 1.6
MCF2L-201ENST00000261963 DDX25Q9UHL0 483 aaKnown RBP25.04■■□□□ 1.6
MCF2L-201ENST00000261963 GUCA1BQ9UMX6 200 aa25.04■■□□□ 1.6
MCF2L-201ENST00000261963 TFR2Q9UP52 801 aa25.04■■□□□ 1.6
MCF2L-201ENST00000261963 ZBED6P86452 979 aa25.03■■□□□ 1.6
MCF2L-201ENST00000261963 EHHADHQ08426 723 aa25.03■■□□□ 1.6
MCF2L-201ENST00000261963 MAP9Q49MG5 647 aa25.03■■□□□ 1.6
MCF2L-201ENST00000261963 KCNQ5Q9NR82 932 aa25.03■■□□□ 1.6
MCF2L-201ENST00000261963 MYO6Q9UM54 1294 aa25.03■■□□□ 1.6
MCF2L-201ENST00000261963 KRT27Q7Z3Y8 459 aa25.03■■□□□ 1.6
MCF2L-201ENST00000261963 EHD4Q9H223 541 aa25.03■■□□□ 1.6
MCF2L-201ENST00000261963 HAUS4Q9H6D7 363 aa25.03■■□□□ 1.6
MCF2L-201ENST00000261963 ERLIN2O94905 339 aa25.02■■□□□ 1.6
MCF2L-201ENST00000261963 MCM3P25205 808 aa25.02■■□□□ 1.6
MCF2L-201ENST00000261963 SHROOM1Q2M3G4 852 aaPredicted RBP25.02■■□□□ 1.6
MCF2L-201ENST00000261963 GUF1Q8N442 669 aaKnown RBP25.02■■□□□ 1.6
MCF2L-201ENST00000261963 ATF5Q9Y2D1 282 aaPredicted RBP25.02■■□□□ 1.6
MCF2L-201ENST00000261963 PCDHAC2Q9Y5I4 1007 aa25.02■■□□□ 1.6
MCF2L-201ENST00000261963 HSPA1LP34931 641 aa25.02■■□□□ 1.6
MCF2L-201ENST00000261963 CRKP46108 304 aa25.02■■□□□ 1.6
MCF2L-201ENST00000261963 MRPL12P52815 198 aaKnown RBP25.02■■□□□ 1.6
MCF2L-201ENST00000261963 SKIDA1Q1XH10 827 aa25.02■■□□□ 1.6
MCF2L-201ENST00000261963 FIGNQ5HY92 759 aa25.02■■□□□ 1.6
MCF2L-201ENST00000261963 DDX12PQ92771 950 aa25.02■■□□□ 1.6
MCF2L-201ENST00000261963 PSTPIP2Q9H939 334 aa25.02■■□□□ 1.6
MCF2L-201ENST00000261963 HPCAL4Q9UM19 191 aa25.02■■□□□ 1.6
MCF2L-201ENST00000261963 COL23A1Q86Y22 540 aaPredicted RBP25.01■■□□□ 1.59
MCF2L-201ENST00000261963 NLGN1Q8N2Q7 840 aa25.01■■□□□ 1.59
MCF2L-201ENST00000261963 GLIS3Q8NEA6 775 aa25.01■■□□□ 1.59
MCF2L-201ENST00000261963 PSMD14O00487 310 aa25.01■■□□□ 1.59
MCF2L-201ENST00000261963 NRXN2Q9P2S2 1712 aa25■■□□□ 1.59
MCF2L-201ENST00000261963 A0A1W2PQJ5 194 aa25■■□□□ 1.59
MCF2L-201ENST00000261963 FAM196BA6NMK8 535 aa25■■□□□ 1.59
MCF2L-201ENST00000261963 ALDH1B1P30837 517 aa25■■□□□ 1.59
MCF2L-201ENST00000261963 CACNB3P54284 484 aa25■■□□□ 1.59
MCF2L-201ENST00000261963 NCAPH2Q6IBW4 605 aa25■■□□□ 1.59
MCF2L-201ENST00000261963 ZNF662Q6ZS27 426 aa25■■□□□ 1.59
MCF2L-201ENST00000261963 NHEJ1Q9H9Q4 299 aaPredicted RBP25■■□□□ 1.59
MCF2L-201ENST00000261963 IDEP14735 1019 aa25■■□□□ 1.59
MCF2L-201ENST00000261963 FKBP15Q5T1M5 1219 aa25■■□□□ 1.59
MCF2L-201ENST00000261963 CCDC17Q96LX7 622 aa25■■□□□ 1.59
MCF2L-201ENST00000261963 PCMTD1Q96MG8 357 aaPredicted RBP25■■□□□ 1.59
MCF2L-201ENST00000261963 ZDHHC15Q96MV8 337 aa25■■□□□ 1.59
MCF2L-201ENST00000261963 DBNDD1Q9H9R9 158 aa25■■□□□ 1.59
MCF2L-201ENST00000261963 SIK3Q9Y2K2 1263 aa25■■□□□ 1.59
MCF2L-201ENST00000261963 RCCD1A6NED2 376 aa24.99■■□□□ 1.59
MCF2L-201ENST00000261963 SHOX2O60902 331 aaPredicted RBP24.99■■□□□ 1.59
MCF2L-201ENST00000261963 USP14P54578 494 aa24.99■■□□□ 1.59
MCF2L-201ENST00000261963 GSCP56915 257 aaPredicted RBP24.99■■□□□ 1.59
MCF2L-201ENST00000261963 VWA3BQ502W6 1294 aa24.99■■□□□ 1.59
MCF2L-201ENST00000261963 LRRC55Q6ZSA7 311 aa24.99■■□□□ 1.59
MCF2L-201ENST00000261963 DNAJC19Q96DA6 116 aa24.99■■□□□ 1.59
MCF2L-201ENST00000261963 MYH4Q9Y623 1939 aa24.99■■□□□ 1.59
MCF2L-201ENST00000261963 KRT83P78385 493 aa24.98■■□□□ 1.59
MCF2L-201ENST00000261963 QRICH1Q2TAL8 776 aa24.98■■□□□ 1.59
MCF2L-201ENST00000261963 CCDC122Q5T0U0 273 aa24.98■■□□□ 1.59
MCF2L-201ENST00000261963 LACRTQ9GZZ8 138 aa24.98■■□□□ 1.59
MCF2L-201ENST00000261963 ZNHIT6Q9NWK9 470 aaKnown RBP24.98■■□□□ 1.59
MCF2L-201ENST00000261963 MYH7BA7E2Y1 1941 aa24.98■■□□□ 1.59
MCF2L-201ENST00000261963 COL11A2P13942 1736 aaPredicted RBP24.98■■□□□ 1.59
MCF2L-201ENST00000261963 USP17L15C9J2P7 530 aa24.98■■□□□ 1.59
MCF2L-201ENST00000261963 USP17L13C9JLJ4 530 aa24.98■■□□□ 1.59
MCF2L-201ENST00000261963 USP17L11C9JVI0 530 aa24.98■■□□□ 1.59
MCF2L-201ENST00000261963 USP17L18D6R9N7 530 aa24.98■■□□□ 1.59
MCF2L-201ENST00000261963 USP17L22D6RA61 530 aa24.98■■□□□ 1.59
MCF2L-201ENST00000261963 USP17L17D6RBQ6 530 aa24.98■■□□□ 1.59
MCF2L-201ENST00000261963 USP17L19D6RCP7 530 aa24.98■■□□□ 1.59
MCF2L-201ENST00000261963 USP17L20D6RJB6 530 aa24.98■■□□□ 1.59
MCF2L-201ENST00000261963 G3V3G9 751 aa24.98■■□□□ 1.59
MCF2L-201ENST00000261963 GCFC2P16383 781 aaKnown RBP24.98■■□□□ 1.59
MCF2L-201ENST00000261963 CYLC1P35663 651 aaPredicted RBP24.98■■□□□ 1.59
MCF2L-201ENST00000261963 USP17L24Q0WX57 530 aa24.98■■□□□ 1.59
MCF2L-201ENST00000261963 LRRC41Q15345 812 aa24.98■■□□□ 1.59
MCF2L-201ENST00000261963 DCAF8Q5TAQ9 597 aa24.98■■□□□ 1.59
MCF2L-201ENST00000261963 USP17L6PQ6QN14 398 aa24.98■■□□□ 1.59
MCF2L-201ENST00000261963 TRAPPC11Q7Z392 1133 aa24.98■■□□□ 1.59
MCF2L-201ENST00000261963 CCDC170Q8IYT3 715 aa24.98■■□□□ 1.59
MCF2L-201ENST00000261963 NDST4Q9H3R1 872 aa24.98■■□□□ 1.59
MCF2L-201ENST00000261963 DDTLA6NHG4 134 aaPredicted RBP24.97■■□□□ 1.59
MCF2L-201ENST00000261963 EPHB6O15197 1021 aa24.97■■□□□ 1.59
MCF2L-201ENST00000261963 CDK17Q00537 523 aa24.97■■□□□ 1.59
MCF2L-201ENST00000261963 LRRC63Q05C16 580 aa24.97■■□□□ 1.59
MCF2L-201ENST00000261963 COG1Q8WTW3 980 aa24.97■■□□□ 1.59
MCF2L-201ENST00000261963 EBAG9O00559 213 aa24.97■■□□□ 1.59
MCF2L-201ENST00000261963 EEF2P13639 858 aaKnown RBP24.97■■□□□ 1.59
MCF2L-201ENST00000261963 LIG3P49916 1009 aa24.97■■□□□ 1.59
MCF2L-201ENST00000261963 TCP10Q12799 353 aa24.97■■□□□ 1.59
MCF2L-201ENST00000261963 HYIQ5T013 277 aa24.97■■□□□ 1.59
MCF2L-201ENST00000261963 MKL1Q969V6 931 aa24.97■■□□□ 1.59
MCF2L-201ENST00000261963 MASTLQ96GX5 879 aa24.97■■□□□ 1.59
MCF2L-201ENST00000261963 LRRC27Q9C0I9 530 aa24.97■■□□□ 1.59
MCF2L-201ENST00000261963 FAM198AQ9UFP1 575 aa24.97■■□□□ 1.59
MCF2L-201ENST00000261963 ABCB11O95342 1321 aa24.97■■□□□ 1.59
MCF2L-201ENST00000261963 SIPA1L1O43166 1804 aa24.97■■□□□ 1.59
MCF2L-201ENST00000261963 PDE6BP35913 854 aa24.96■■□□□ 1.59
MCF2L-201ENST00000261963 CCT5P48643 541 aa24.96■■□□□ 1.59
MCF2L-201ENST00000261963 PSMD2Q13200 908 aa24.96■■□□□ 1.59
MCF2L-201ENST00000261963 SH3BP5LQ7L8J4 393 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms