RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 SPDYE16A6NNV3 312 aaPredicted RBP21.16■□□□□ 0.98
COL4A3BP-201ENST00000261415 MEIS2O14770 477 aa21.16■□□□□ 0.98
COL4A3BP-201ENST00000261415 INF2Q27J81 1249 aa21.16■□□□□ 0.98
COL4A3BP-201ENST00000261415 TTC38Q5R3I4 469 aa21.16■□□□□ 0.98
COL4A3BP-201ENST00000261415 USP17L6PQ6QN14 398 aa21.16■□□□□ 0.98
COL4A3BP-201ENST00000261415 REPS2Q8NFH8 660 aa21.16■□□□□ 0.98
COL4A3BP-201ENST00000261415 DNAJC25Q9H1X3 360 aa21.16■□□□□ 0.98
COL4A3BP-201ENST00000261415 HOXC10Q9NYD6 342 aa21.16■□□□□ 0.98
COL4A3BP-201ENST00000261415 AGTPBP1Q9UPW5 1226 aa21.16■□□□□ 0.98
COL4A3BP-201ENST00000261415 MRPL11Q9Y3B7 192 aaKnown RBP21.16■□□□□ 0.98
COL4A3BP-201ENST00000261415 SLC39A14Q15043 492 aa21.15■□□□□ 0.98
COL4A3BP-201ENST00000261415 FASTKD5Q7L8L6 764 aaKnown RBP21.15■□□□□ 0.98
COL4A3BP-201ENST00000261415 KCNG4Q8TDN1 519 aa21.15■□□□□ 0.98
COL4A3BP-201ENST00000261415 SPTLC2O15270 562 aa21.15■□□□□ 0.98
COL4A3BP-201ENST00000261415 HUNKP57058 714 aa21.15■□□□□ 0.98
COL4A3BP-201ENST00000261415 E2F4Q16254 413 aa21.15■□□□□ 0.98
COL4A3BP-201ENST00000261415 PGBD1Q96JS3 809 aa21.15■□□□□ 0.98
COL4A3BP-201ENST00000261415 FAM107BQ9H098 131 aa21.15■□□□□ 0.98
COL4A3BP-201ENST00000261415 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.15■□□□□ 0.98
COL4A3BP-201ENST00000261415 ETF1P62495 437 aaKnown RBP21.14■□□□□ 0.97
COL4A3BP-201ENST00000261415 TACO1Q9BSH4 297 aaKnown RBP21.14■□□□□ 0.97
COL4A3BP-201ENST00000261415 IQCB1Q15051 598 aa21.13■□□□□ 0.97
COL4A3BP-201ENST00000261415 E4F1Q66K89 784 aaPredicted RBP21.13■□□□□ 0.97
COL4A3BP-201ENST00000261415 TBCKQ8TEA7 893 aa21.13■□□□□ 0.97
COL4A3BP-201ENST00000261415 PNMA2Q9UL42 364 aa21.13■□□□□ 0.97
COL4A3BP-201ENST00000261415 ZNF214Q9UL59 606 aaPredicted RBP21.13■□□□□ 0.97
COL4A3BP-201ENST00000261415 PIK3CDO00329 1044 aa21.13■□□□□ 0.97
COL4A3BP-201ENST00000261415 USP8P40818 1118 aa21.13■□□□□ 0.97
COL4A3BP-201ENST00000261415 ME1P48163 572 aa21.13■□□□□ 0.97
COL4A3BP-201ENST00000261415 OAZ1P54368 228 aa21.13■□□□□ 0.97
COL4A3BP-201ENST00000261415 MKRN3Q13064 507 aaKnown RBP21.13■□□□□ 0.97
COL4A3BP-201ENST00000261415 CCDC150Q8NCX0 1101 aa21.13■□□□□ 0.97
COL4A3BP-201ENST00000261415 SMC1BQ8NDV3 1235 aa21.13■□□□□ 0.97
COL4A3BP-201ENST00000261415 CCDC34Q96HJ3 373 aa21.13■□□□□ 0.97
COL4A3BP-201ENST00000261415 FUT8Q9BYC5 575 aa21.13■□□□□ 0.97
COL4A3BP-201ENST00000261415 DNAI1Q9UI46 699 aa21.13■□□□□ 0.97
COL4A3BP-201ENST00000261415 CEP131Q9UPN4 1083 aa21.13■□□□□ 0.97
COL4A3BP-201ENST00000261415 ALAS1P13196 640 aa21.12■□□□□ 0.97
COL4A3BP-201ENST00000261415 AP3B2Q13367 1082 aa21.12■□□□□ 0.97
COL4A3BP-201ENST00000261415 TMEM132BQ14DG7 1078 aa21.12■□□□□ 0.97
COL4A3BP-201ENST00000261415 GPAT2Q6NUI2 795 aa21.12■□□□□ 0.97
COL4A3BP-201ENST00000261415 MS4A4AQ96JQ5 239 aa21.12■□□□□ 0.97
COL4A3BP-201ENST00000261415 PCDHA7Q9UN72 937 aa21.12■□□□□ 0.97
COL4A3BP-201ENST00000261415 PPP6R2O75170 966 aa21.12■□□□□ 0.97
COL4A3BP-201ENST00000261415 CFBP00751 764 aa21.12■□□□□ 0.97
COL4A3BP-201ENST00000261415 ZBTB48P10074 688 aaPredicted RBP21.12■□□□□ 0.97
COL4A3BP-201ENST00000261415 CALRP27797 417 aaKnown RBP21.12■□□□□ 0.97
COL4A3BP-201ENST00000261415 GTF2A2P52657 109 aa21.12■□□□□ 0.97
COL4A3BP-201ENST00000261415 ZNF174Q15697 407 aa21.12■□□□□ 0.97
COL4A3BP-201ENST00000261415 SPRYD7Q5W111 196 aa21.12■□□□□ 0.97
COL4A3BP-201ENST00000261415 NEK8Q86SG6 692 aa21.12■□□□□ 0.97
COL4A3BP-201ENST00000261415 MSL3Q8N5Y2 521 aaKnown RBP21.12■□□□□ 0.97
COL4A3BP-201ENST00000261415 ASCC2Q9H1I8 757 aaPredicted RBP21.12■□□□□ 0.97
COL4A3BP-201ENST00000261415 A0A087WUV0 522 aaPredicted RBP21.11■□□□□ 0.97
COL4A3BP-201ENST00000261415 SMC2O95347 1197 aa21.11■□□□□ 0.97
COL4A3BP-201ENST00000261415 MARCKSP29966 332 aaPredicted RBP21.11■□□□□ 0.97
COL4A3BP-201ENST00000261415 HOXA13P31271 388 aaPredicted RBP21.11■□□□□ 0.97
COL4A3BP-201ENST00000261415 CLEC4DQ8WXI8 215 aa21.11■□□□□ 0.97
COL4A3BP-201ENST00000261415 TBC1D5Q92609 795 aa21.11■□□□□ 0.97
COL4A3BP-201ENST00000261415 P2RX7Q99572 595 aaKnown RBP21.11■□□□□ 0.97
COL4A3BP-201ENST00000261415 HOMER2Q9NSB8 354 aa21.11■□□□□ 0.97
COL4A3BP-201ENST00000261415 LCTP09848 1927 aa21.11■□□□□ 0.97
COL4A3BP-201ENST00000261415 ATP2A1O14983 1001 aa21.11■□□□□ 0.97
COL4A3BP-201ENST00000261415 CETPP11597 493 aa21.11■□□□□ 0.97
COL4A3BP-201ENST00000261415 MCM7P33993 719 aa21.11■□□□□ 0.97
COL4A3BP-201ENST00000261415 PABPC4Q13310 644 aaKnown RBP eCLIP21.11■□□□□ 0.97
COL4A3BP-201ENST00000261415 NBPF20Q3BBV1 942 aa21.11■□□□□ 0.97
COL4A3BP-201ENST00000261415 SNRNP48Q6IEG0 339 aaKnown RBP21.11■□□□□ 0.97
COL4A3BP-201ENST00000261415 ANO3Q9BYT9 981 aa21.11■□□□□ 0.97
COL4A3BP-201ENST00000261415 BECN2A8MW95 431 aa21.1■□□□□ 0.97
COL4A3BP-201ENST00000261415 NFIBO00712 420 aa21.1■□□□□ 0.97
COL4A3BP-201ENST00000261415 BMP15O95972 392 aa21.1■□□□□ 0.97
COL4A3BP-201ENST00000261415 LETM2Q2VYF4 491 aa21.1■□□□□ 0.97
COL4A3BP-201ENST00000261415 POTEEQ6S8J3 1075 aa21.1■□□□□ 0.97
COL4A3BP-201ENST00000261415 SAPCD2Q86UD0 394 aa21.1■□□□□ 0.97
COL4A3BP-201ENST00000261415 JMYQ8N9B5 988 aa21.1■□□□□ 0.97
COL4A3BP-201ENST00000261415 TEX13BQ9BXU2 312 aa21.1■□□□□ 0.97
COL4A3BP-201ENST00000261415 RIPK3Q9Y572 518 aa21.1■□□□□ 0.97
COL4A3BP-201ENST00000261415 SPDYE3A6NKU9 549 aa21.09■□□□□ 0.97
COL4A3BP-201ENST00000261415 GCOM1H8Y6P7 765 aaPredicted RBP21.09■□□□□ 0.97
COL4A3BP-201ENST00000261415 POLR2MP0CAP2 368 aa21.09■□□□□ 0.97
COL4A3BP-201ENST00000261415 LBX2Q6XYB7 198 aa21.09■□□□□ 0.97
COL4A3BP-201ENST00000261415 TADA2BQ86TJ2 420 aa21.09■□□□□ 0.97
COL4A3BP-201ENST00000261415 CCL15-CCL14A0A0B4J2E2 113 aa21.09■□□□□ 0.97
COL4A3BP-201ENST00000261415 FOSP01100 380 aaPredicted RBP21.09■□□□□ 0.97
COL4A3BP-201ENST00000261415 HERVK_113P62684 666 aa21.09■□□□□ 0.97
COL4A3BP-201ENST00000261415 CCL15Q16663 113 aa21.09■□□□□ 0.97
COL4A3BP-201ENST00000261415 MB21D1Q8N884 522 aa21.09■□□□□ 0.97
COL4A3BP-201ENST00000261415 ZNFX1Q9P2E3 1918 aaKnown RBP21.09■□□□□ 0.97
COL4A3BP-201ENST00000261415 OSBPP22059 807 aa21.08■□□□□ 0.97
COL4A3BP-201ENST00000261415 PTGDRQ13258 359 aa21.08■□□□□ 0.97
COL4A3BP-201ENST00000261415 ADALQ6DHV7 355 aa21.08■□□□□ 0.97
COL4A3BP-201ENST00000261415 RNF146Q9NTX7 359 aa21.08■□□□□ 0.97
COL4A3BP-201ENST00000261415 MAP2K7O14733 419 aa21.08■□□□□ 0.96
COL4A3BP-201ENST00000261415 EDIL3O43854 480 aa21.08■□□□□ 0.96
COL4A3BP-201ENST00000261415 CCNT1O60563 726 aaKnown RBP21.08■□□□□ 0.96
COL4A3BP-201ENST00000261415 TOMM70O94826 608 aa21.08■□□□□ 0.96
COL4A3BP-201ENST00000261415 HSD17B4P51659 736 aa21.08■□□□□ 0.96
COL4A3BP-201ENST00000261415 ZNF157P51786 506 aaPredicted RBP21.08■□□□□ 0.96
COL4A3BP-201ENST00000261415 ATP2C1P98194 919 aaPredicted RBP21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms