RNA–Protein interactions for RNA: ENST00000260197.11

SORL1-201, Transcript of sortilin related receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORL1, Length 10,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-201ENST00000260197 DAAM1Q9Y4D1 1078 aa12.63□□□□□ -0.39
SORL1-201ENST00000260197 SYNGAP1Q96PV0 1343 aa12.63□□□□□ -0.39
SORL1-201ENST00000260197 TMCO4Q5TGY1 634 aa12.63□□□□□ -0.39
SORL1-201ENST00000260197 RNF8O76064 485 aa12.63□□□□□ -0.39
SORL1-201ENST00000260197 TMOD1P28289 359 aa12.63□□□□□ -0.39
SORL1-201ENST00000260197 EIF4A1P60842 406 aaKnown RBP12.63□□□□□ -0.39
SORL1-201ENST00000260197 SMCR8Q8TEV9 937 aaPredicted RBP12.63□□□□□ -0.39
SORL1-201ENST00000260197 GJA10Q969M2 543 aa12.63□□□□□ -0.39
SORL1-201ENST00000260197 SMYD2Q9NRG4 433 aa12.63□□□□□ -0.39
SORL1-201ENST00000260197 STAP2Q9UGK3 403 aa12.63□□□□□ -0.39
SORL1-201ENST00000260197 PCDHA4Q9UN74 947 aa12.63□□□□□ -0.39
SORL1-201ENST00000260197 DCAF15Q66K64 600 aa12.62□□□□□ -0.39
SORL1-201ENST00000260197 TUBB6Q9BUF5 446 aa12.62□□□□□ -0.39
SORL1-201ENST00000260197 FRMD3A2A2Y4 597 aa12.62□□□□□ -0.39
SORL1-201ENST00000260197 HEXIM1O94992 359 aaKnown RBP12.62□□□□□ -0.39
SORL1-201ENST00000260197 ZKSCAN8Q15776 578 aaPredicted RBP12.62□□□□□ -0.39
SORL1-201ENST00000260197 EMBQ6PCB8 327 aa12.62□□□□□ -0.39
SORL1-201ENST00000260197 TTLL1O95922 423 aa12.62□□□□□ -0.39
SORL1-201ENST00000260197 PDIA3P30101 505 aaKnown RBP12.62□□□□□ -0.39
SORL1-201ENST00000260197 ICA1Q05084 483 aa12.62□□□□□ -0.39
SORL1-201ENST00000260197 ACTR5Q9H9F9 607 aaPredicted RBP12.62□□□□□ -0.39
SORL1-201ENST00000260197 SPC25Q9HBM1 224 aa12.62□□□□□ -0.39
SORL1-201ENST00000260197 NUB1Q9Y5A7 615 aa12.62□□□□□ -0.39
SORL1-201ENST00000260197 SPECC1L-ADORA2AF8WAN1 911 aa12.62□□□□□ -0.39
SORL1-201ENST00000260197 PTK2Q05397 1052 aa12.62□□□□□ -0.39
SORL1-201ENST00000260197 ITKQ08881 620 aa12.62□□□□□ -0.39
SORL1-201ENST00000260197 VSTM4Q8IW00 320 aa12.62□□□□□ -0.39
SORL1-201ENST00000260197 AATKQ6ZMQ8 1374 aa12.62□□□□□ -0.39
SORL1-201ENST00000260197 A2ML1A8K2U0 1454 aa12.62□□□□□ -0.39
SORL1-201ENST00000260197 MYO1FO00160 1098 aa12.62□□□□□ -0.39
SORL1-201ENST00000260197 FAM26FQ5R3K3 315 aa12.62□□□□□ -0.39
SORL1-201ENST00000260197 ANAPC5Q9UJX4 755 aa12.62□□□□□ -0.39
SORL1-201ENST00000260197 ZNF148Q9UQR1 794 aa12.62□□□□□ -0.39
SORL1-201ENST00000260197 SKIP12755 728 aa12.62□□□□□ -0.39
SORL1-201ENST00000260197 XKR9Q5GH70 373 aa12.62□□□□□ -0.39
SORL1-201ENST00000260197 PPP4R3CPQ6ZMV5 832 aa12.62□□□□□ -0.39
SORL1-201ENST00000260197 ADGRL3Q9HAR2 1447 aa12.62□□□□□ -0.39
SORL1-201ENST00000260197 LGR6Q9HBX8 967 aa12.62□□□□□ -0.39
SORL1-201ENST00000260197 ABCC3O15438 1527 aa12.62□□□□□ -0.39
SORL1-201ENST00000260197 MAN2A1Q16706 1144 aa12.62□□□□□ -0.39
SORL1-201ENST00000260197 SLC35F6Q8N357 371 aa12.62□□□□□ -0.39
SORL1-201ENST00000260197 PRRC2BQ5JSZ5 2229 aaKnown RBP12.62□□□□□ -0.39
SORL1-201ENST00000260197 LRRIQ4A6NIV6 560 aa12.62□□□□□ -0.39
SORL1-201ENST00000260197 LRRC63Q05C16 580 aa12.62□□□□□ -0.39
SORL1-201ENST00000260197 NR1H3Q13133 447 aa12.62□□□□□ -0.39
SORL1-201ENST00000260197 CALR3Q96L12 384 aaKnown RBP12.62□□□□□ -0.39
SORL1-201ENST00000260197 TEKT3Q9BXF9 490 aa12.62□□□□□ -0.39
SORL1-201ENST00000260197 PPRC1Q5VV67 1664 aaKnown RBP12.62□□□□□ -0.39
SORL1-201ENST00000260197 ATP6V0A1Q93050 837 aa12.61□□□□□ -0.39
SORL1-201ENST00000260197 IFT122Q9HBG6 1241 aa12.61□□□□□ -0.39
SORL1-201ENST00000260197 AFPP02771 609 aaKnown RBP12.61□□□□□ -0.39
SORL1-201ENST00000260197 GCFC2P16383 781 aaKnown RBP12.61□□□□□ -0.39
SORL1-201ENST00000260197 SAT1P21673 171 aa12.61□□□□□ -0.39
SORL1-201ENST00000260197 TMED2Q15363 201 aa12.61□□□□□ -0.39
SORL1-201ENST00000260197 GPATCH4Q5T3I0 446 aaKnown RBP12.61□□□□□ -0.39
SORL1-201ENST00000260197 FGFR1OP2Q9NVK5 253 aa12.61□□□□□ -0.39
SORL1-201ENST00000260197 MAPK4P31152 587 aa12.61□□□□□ -0.39
SORL1-201ENST00000260197 ZNF658Q5TYW1 1059 aaPredicted RBP12.61□□□□□ -0.39
SORL1-201ENST00000260197 THAP9Q9H5L6 903 aa12.61□□□□□ -0.39
SORL1-201ENST00000260197 TTC3P53804 2025 aa12.61□□□□□ -0.39
SORL1-201ENST00000260197 ATP8B3O60423 1300 aa12.61□□□□□ -0.39
SORL1-201ENST00000260197 SDR42E1Q8WUS8 393 aa12.61□□□□□ -0.39
SORL1-201ENST00000260197 DACT3Q96B18 629 aaPredicted RBP12.61□□□□□ -0.39
SORL1-201ENST00000260197 ZNF653Q96CK0 615 aa12.61□□□□□ -0.39
SORL1-201ENST00000260197 SERPINI1Q99574 410 aa12.61□□□□□ -0.39
SORL1-201ENST00000260197 DR1Q01658 176 aa12.61□□□□□ -0.39
SORL1-201ENST00000260197 ADCY2Q08462 1091 aa12.61□□□□□ -0.39
SORL1-201ENST00000260197 ALCAMQ13740 583 aa12.61□□□□□ -0.39
SORL1-201ENST00000260197 CAPN12Q6ZSI9 719 aa12.61□□□□□ -0.39
SORL1-201ENST00000260197 NT5C1BQ96P26 610 aa12.61□□□□□ -0.39
SORL1-201ENST00000260197 MED7O43513 233 aa12.61□□□□□ -0.39
SORL1-201ENST00000260197 FOSP01100 380 aaPredicted RBP12.61□□□□□ -0.39
SORL1-201ENST00000260197 KCTD6Q8NC69 237 aa12.61□□□□□ -0.39
SORL1-201ENST00000260197 CLIC6Q96NY7 704 aa12.61□□□□□ -0.39
SORL1-201ENST00000260197 ANO3Q9BYT9 981 aa12.61□□□□□ -0.39
SORL1-201ENST00000260197 EPB41L5Q9HCM4 733 aa12.61□□□□□ -0.39
SORL1-201ENST00000260197 PTPREP23469 700 aa12.61□□□□□ -0.39
SORL1-201ENST00000260197 PDE1BQ01064 536 aa12.61□□□□□ -0.39
SORL1-201ENST00000260197 C2orf54Q08AI8 447 aa12.61□□□□□ -0.39
SORL1-201ENST00000260197 CMTR1Q8N1G2 835 aaKnown RBP12.61□□□□□ -0.39
SORL1-201ENST00000260197 MAGOHBQ96A72 148 aaKnown RBP12.61□□□□□ -0.39
SORL1-201ENST00000260197 RBL2Q08999 1139 aa12.61□□□□□ -0.39
SORL1-201ENST00000260197 TCP11Q8WWU5 503 aa12.61□□□□□ -0.39
SORL1-201ENST00000260197 TRIM15Q9C019 465 aa12.61□□□□□ -0.39
SORL1-201ENST00000260197 SOWAHDA6NJG2 315 aa12.6□□□□□ -0.39
SORL1-201ENST00000260197 USP17L12C9JPN9 530 aa12.6□□□□□ -0.39
SORL1-201ENST00000260197 USP17L21D6R901 530 aa12.6□□□□□ -0.39
SORL1-201ENST00000260197 IFNAR2P48551 515 aa12.6□□□□□ -0.39
SORL1-201ENST00000260197 RSBN1LQ6PCB5 846 aaPredicted RBP12.6□□□□□ -0.39
SORL1-201ENST00000260197 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.6□□□□□ -0.398e-8■■■■■ 27.8
SORL1-201ENST00000260197 ZNF496Q96IT1 587 aaPredicted RBP12.6□□□□□ -0.39
SORL1-201ENST00000260197 TFDP1Q14186 410 aa12.6□□□□□ -0.39
SORL1-201ENST00000260197 RASIP1Q5U651 963 aa12.6□□□□□ -0.39
SORL1-201ENST00000260197 ANKRD35Q8N283 1001 aa12.6□□□□□ -0.39
SORL1-201ENST00000260197 LRRC43Q8N309 656 aa12.6□□□□□ -0.39
SORL1-201ENST00000260197 RAPH1Q70E73 1250 aa12.6□□□□□ -0.39
SORL1-201ENST00000260197 LRRC47Q8N1G4 583 aaKnown RBP12.6□□□□□ -0.39
SORL1-201ENST00000260197 H7C0C1 242 aa12.6□□□□□ -0.39
SORL1-201ENST00000260197 ATP2B4P23634 1241 aa12.6□□□□□ -0.39
SORL1-201ENST00000260197 ATP5OP48047 213 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms